Comparing WP_008507131.1 NCBI__GCF_000182725.1:WP_008507131.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
A0QYB5 D-threitol-binding protein from Mycolicibacterium smegmatis (strain ATCC 700084 / mc(2)155) (Mycobacterium smegmatis) (see paper)
39% identity, 72% coverage: 21:257/329 of query aligns to 30:261/349 of A0QYB5
Sites not aligning to the query:
4rsmA Crystal structure of carbohydrate transporter msmeg_3599 from mycobacterium smegmatis str. Mc2 155, target efi-510970, in complex with d-threitol (see paper)
40% identity, 70% coverage: 27:257/329 of query aligns to 4:229/315 of 4rsmA
Sites not aligning to the query:
A0QYB3 Xylitol-binding protein from Mycolicibacterium smegmatis (strain ATCC 700084 / mc(2)155) (Mycobacterium smegmatis) (see paper)
37% identity, 79% coverage: 27:287/329 of query aligns to 36:292/349 of A0QYB3
5hkoA Crystal structure of abc transporter solute binding protein msmeg_3598 from mycobacterium smegmatis str. Mc2 155, target efi-510969, in complex with l-sorbitol
37% identity, 79% coverage: 27:287/329 of query aligns to 3:259/314 of 5hkoA
4rs3A Crystal structure of carbohydrate transporter a0qyb3 from mycobacterium smegmatis str. Mc2 155, target efi-510969, in complex with xylitol (see paper)
37% identity, 79% coverage: 27:287/329 of query aligns to 3:259/315 of 4rs3A
4yo7A Crystal structure of an abc transporter solute binding protein (ipr025997) from bacillus halodurans c-125 (bh2323, target efi- 511484) with bound myo-inositol
35% identity, 79% coverage: 28:287/329 of query aligns to 9:266/287 of 4yo7A
2ioyA Crystal structure of thermoanaerobacter tengcongensis ribose binding protein (see paper)
37% identity, 62% coverage: 59:263/329 of query aligns to 32:233/274 of 2ioyA
Sites not aligning to the query:
5dteB Crystal structure of an abc transporter periplasmic solute binding protein (ipr025997) from actinobacillus succinogenes 130z(asuc_0081, target efi-511065) with bound d-allose
41% identity, 63% coverage: 78:283/329 of query aligns to 55:261/287 of 5dteB
Sites not aligning to the query:
5ocpA The periplasmic binding protein component of the arabinose abc transporter from shewanella sp. Ana-3 bound to alpha and beta-l- arabinofuranose
33% identity, 72% coverage: 28:264/329 of query aligns to 3:242/302 of 5ocpA
7e7mC Crystal structure analysis of the streptococcus agalactiae ribose binding protein rbsb
31% identity, 73% coverage: 24:263/329 of query aligns to 7:239/284 of 7e7mC
Sites not aligning to the query:
6hyhA Crystal structure of msmeg_1712 from mycobacterium smegmatis in complex with beta-d-fucofuranose (see paper)
31% identity, 73% coverage: 26:264/329 of query aligns to 2:244/304 of 6hyhA
Sites not aligning to the query:
6hbmA Crystal structure of msmeg_1712 from mycobacterium smegmatis in complex with alpha-l-arabinofuranose (see paper)
31% identity, 73% coverage: 26:264/329 of query aligns to 2:244/304 of 6hbmA
Sites not aligning to the query:
6hbdA Crystal structure of msmeg_1712 from mycobacterium smegmatis in complex with beta-d-galactofuranose (see paper)
31% identity, 73% coverage: 26:264/329 of query aligns to 3:245/305 of 6hbdA
Sites not aligning to the query:
4rxmB Crystal structure of periplasmic abc transporter solute binding protein a7jw62 from mannheimia haemolytica phl213, target efi-511105, in complex with myo-inositol
32% identity, 62% coverage: 54:257/329 of query aligns to 29:233/288 of 4rxmB
Sites not aligning to the query:
4rxmA Crystal structure of periplasmic abc transporter solute binding protein a7jw62 from mannheimia haemolytica phl213, target efi-511105, in complex with myo-inositol
32% identity, 62% coverage: 54:257/329 of query aligns to 31:235/291 of 4rxmA
Sites not aligning to the query:
5ibqA Crystal structure of an abc solute binding protein from rhizobium etli cfn 42 (rhe_pf00037,target efi-511357) in complex with alpha-d-apiose
36% identity, 64% coverage: 68:277/329 of query aligns to 43:251/287 of 5ibqA
Sites not aligning to the query:
4ry0A Crystal structure of ribose transporter solute binding protein rhe_pf00037 from rhizobium etli cfn 42, target efi-511357, in complex with d-ribose
36% identity, 64% coverage: 68:277/329 of query aligns to 43:251/287 of 4ry0A
Sites not aligning to the query:
P39325 Galactofuranose-binding protein YtfQ from Escherichia coli (strain K12) (see 2 papers)
31% identity, 68% coverage: 35:257/329 of query aligns to 24:260/318 of P39325
Sites not aligning to the query:
2vk2A Crystal structure of a galactofuranose binding protein (see paper)
31% identity, 68% coverage: 35:257/329 of query aligns to 2:238/296 of 2vk2A