Comparing WP_008509253.1 NCBI__GCF_000182725.1:WP_008509253.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
4ywhA Crystal structure of an abc transporter solute binding protein (ipr025997) from actinobacillus succinogenes 130z (asuc_0499, target efi-511068) with bound d-xylose
62% identity, 89% coverage: 35:336/339 of query aligns to 6:308/310 of 4ywhA
3ma0A Closed liganded crystal structure of xylose binding protein from escherichia coli (see paper)
62% identity, 89% coverage: 35:336/339 of query aligns to 5:307/313 of 3ma0A
3uugA Crystal structure of the periplasmic sugar binding protein chve (see paper)
34% identity, 88% coverage: 35:334/339 of query aligns to 5:325/329 of 3uugA
3urmA Crystal structure of the periplasmic sugar binding protein chve (see paper)
34% identity, 88% coverage: 35:334/339 of query aligns to 5:325/329 of 3urmA
4wwhA Crystal structure of an abc transporter solute binding protein (ipr025997) from mycobacterium smegmatis (msmeg_1704, target efi- 510967) with bound d-galactose
32% identity, 89% coverage: 35:337/339 of query aligns to 5:329/329 of 4wwhA
4ys6A Crystal structure of an abc transporter solute binding protein (ipr025997) from clostridium phytofermentans (cphy_1585, target efi- 511156) with bound beta-d-glucose
31% identity, 90% coverage: 34:337/339 of query aligns to 2:324/324 of 4ys6A
4rxuA Crystal structure of carbohydrate transporter solute binding protein caur_1924 from chloroflexus aurantiacus, target efi-511158, in complex with d-glucose
33% identity, 85% coverage: 46:332/339 of query aligns to 17:332/340 of 4rxuA
Sites not aligning to the query:
2ioyA Crystal structure of thermoanaerobacter tengcongensis ribose binding protein (see paper)
33% identity, 71% coverage: 58:296/339 of query aligns to 26:260/274 of 2ioyA
Sites not aligning to the query:
6s3tA P46, an immunodominant surface protein from mycoplasma hyopneumoniae (see paper)
27% identity, 88% coverage: 25:323/339 of query aligns to 1:372/374 of 6s3tA
6ruxA P46, an immunodominant surface protein from mycoplasma hyopneumoniae (see paper)
29% identity, 71% coverage: 85:323/339 of query aligns to 63:370/373 of 6ruxA
5dteB Crystal structure of an abc transporter periplasmic solute binding protein (ipr025997) from actinobacillus succinogenes 130z(asuc_0081, target efi-511065) with bound d-allose
32% identity, 73% coverage: 49:294/339 of query aligns to 31:269/287 of 5dteB
Sites not aligning to the query:
4yo7A Crystal structure of an abc transporter solute binding protein (ipr025997) from bacillus halodurans c-125 (bh2323, target efi- 511484) with bound myo-inositol
29% identity, 74% coverage: 76:325/339 of query aligns to 50:283/287 of 4yo7A
Sites not aligning to the query:
A0QYB5 D-threitol-binding protein from Mycolicibacterium smegmatis (strain ATCC 700084 / mc(2)155) (Mycobacterium smegmatis) (see paper)
28% identity, 98% coverage: 6:336/339 of query aligns to 8:321/349 of A0QYB5
4ry9B Crystal structure of carbohydrate transporter solute binding protein veis_2079 from verminephrobacter eiseniae ef01-2, target efi-511009, a complex with d-talitol
27% identity, 86% coverage: 35:325/339 of query aligns to 5:290/297 of 4ry9B
4ry9A Crystal structure of carbohydrate transporter solute binding protein veis_2079 from verminephrobacter eiseniae ef01-2, target efi-511009, a complex with d-talitol
27% identity, 86% coverage: 35:325/339 of query aligns to 5:290/297 of 4ry9A
4rxmB Crystal structure of periplasmic abc transporter solute binding protein a7jw62 from mannheimia haemolytica phl213, target efi-511105, in complex with myo-inositol
26% identity, 85% coverage: 34:322/339 of query aligns to 4:279/288 of 4rxmB