Comparing WP_008538999.1 NCBI__GCF_000245775.1:WP_008538999.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 3 hits to proteins with known functional sites (download)
P69797 PTS system mannose-specific EIIAB component; EIIAB-Man; EIII-Man; EC 2.7.1.191 from Escherichia coli (strain K12) (see 4 papers)
36% identity, 93% coverage: 2:137/147 of query aligns to 3:135/323 of P69797
Sites not aligning to the query:
1vrcB Complex of enzyme iiamannose and the histidine-containing phosphocarrier protein hpr from escherichia coli nmr, restrained regularized mean structure (see paper)
43% identity, 70% coverage: 2:104/147 of query aligns to 2:104/129 of 1vrcB
P26379 PTS system fructose-specific EIIA component; EIIA-Fru; Fructose-specific phosphotransferase enzyme IIA component; lev-PTS; p16 from Bacillus subtilis (strain 168) (see paper)
37% identity, 71% coverage: 1:104/147 of query aligns to 1:104/146 of P26379
>WP_008538999.1 NCBI__GCF_000245775.1:WP_008538999.1
MLGIIVGTHGHLAEELVNTCAMICGQPDNLTTVTLVPGEGPEDLMAKYNKAMEEMDTTNG
VIILNDLFGGSPYNAACRVAMENDKCGIVTGVSLPMLVEVINYRLCNGENANVQDAMEKA
VEASVAGAQKFHKSQVESETDDEGDDL
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory