SitesBLAST
Comparing WP_008807572.1 NCBI__GCF_000025465.1:WP_008807572.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
2d4eC Crystal structure of the hpcc from thermus thermophilus hb8
48% identity, 99% coverage: 6:487/488 of query aligns to 29:514/515 of 2d4eC
- active site: N173 (= N148), K196 (= K171), E271 (= E244), C305 (= C278), E409 (= E382), E486 (= E459)
- binding nicotinamide-adenine-dinucleotide: I169 (≠ V144), T170 (≠ S145), P171 (= P146), W172 (= W147), K196 (= K171), A198 (≠ S173), G229 (= G204), G233 (= G208), A234 (≠ D209), T248 (= T223), G249 (= G224), E250 (≠ G225), T253 (= T228), E271 (= E244), L272 (= L245), C305 (= C278), E409 (= E382), F411 (= F384), F475 (= F448)
Q9H2A2 2-aminomuconic semialdehyde dehydrogenase; Aldehyde dehydrogenase 12; Aldehyde dehydrogenase family 8 member A1; EC 1.2.1.32 from Homo sapiens (Human) (see paper)
43% identity, 97% coverage: 4:476/488 of query aligns to 10:485/487 of Q9H2A2
- R109 (= R103) mutation to A: About 65-fold loss of catalytic efficiency.
- N155 (= N148) mutation to A: Complete loss of activity.
- R451 (= R442) mutation to A: Complete loss of activity.
7radA Crystal structure analysis of aldh1b1
42% identity, 97% coverage: 5:478/488 of query aligns to 19:488/493 of 7radA
- binding nicotinamide-adenine-dinucleotide: I158 (≠ V144), I159 (≠ S145), P160 (= P146), W161 (= W147), N162 (= N148), M167 (≠ T153), K185 (= K171), E188 (= E174), G218 (= G204), G222 (= G208), A223 (≠ D209), T237 (= T223), G238 (= G224), S239 (≠ G225), V242 (≠ T228), E261 (= E244), L262 (= L245), C295 (= C278), E392 (= E382), F394 (= F384)
- binding 3-(2-methoxyphenyl)-1-(4-phenylphenyl)-6,7,8,9-tetrahydro-5~{H}-imidazo[1,2-a][1,3]diazepine: L113 (≠ V99), E117 (≠ R103), F163 (≠ V149), E285 (≠ F268), F289 (≠ S272), N450 (= N440), V452 (≠ R442)
7mjdA Crystal structure analysis of aldh1b1
42% identity, 97% coverage: 5:478/488 of query aligns to 19:488/493 of 7mjdA
- binding nicotinamide-adenine-dinucleotide: I158 (≠ V144), I159 (≠ S145), P160 (= P146), W161 (= W147), N162 (= N148), M167 (≠ T153), K185 (= K171), E188 (= E174), G218 (= G204), G222 (= G208), F236 (= F222), T237 (= T223), G238 (= G224), S239 (≠ G225), V242 (≠ T228), E261 (= E244), L262 (= L245), C295 (= C278), E392 (= E382), F394 (= F384)
- binding 8-(2-methoxyphenyl)-10-(4-phenylphenyl)-1$l^{4},8-diazabicyclo[5.3.0]deca-1(7),9-diene: E117 (≠ R103), E285 (≠ F268), F289 (≠ S272), N450 (= N440), V452 (≠ R442)
7mjcA Crystal structure analysis of aldh1b1
42% identity, 97% coverage: 5:478/488 of query aligns to 19:488/493 of 7mjcA
- binding nicotinamide-adenine-dinucleotide: I158 (≠ V144), I159 (≠ S145), P160 (= P146), W161 (= W147), N162 (= N148), K185 (= K171), E188 (= E174), G218 (= G204), G222 (= G208), T237 (= T223), G238 (= G224), S239 (≠ G225), V242 (≠ T228), E261 (= E244), L262 (= L245), C295 (= C278), E392 (= E382), F394 (= F384)
4npiA 1.94 angstroms x-ray crystal structure of NAD- and intermediate- bound alpha-aminomuconate-epsilon-semialdehyde dehydrogenase from pseudomonas fluorescens (see paper)
40% identity, 97% coverage: 6:478/488 of query aligns to 5:483/483 of 4npiA
- active site: N152 (= N148), K175 (= K171), E251 (= E244), C285 (= C278), E387 (= E382), E464 (= E459)
- binding (2Z,4E)-2-hydroxy-6-oxohexa-2,4-dienoic acid: R103 (= R103), L157 (≠ T153), W160 (= W156), E251 (= E244), C285 (= C278), Y445 (≠ N440), R447 (= R442), F453 (= F448)
- binding nicotinamide-adenine-dinucleotide: I148 (≠ V144), S149 (= S145), P150 (= P146), W151 (= W147), K175 (= K171), E178 (= E174), G208 (= G204), G213 (= G208), E214 (≠ D209), F227 (= F222), G229 (= G224), E230 (≠ G225), T233 (= T228), G253 (= G246), C285 (= C278), K335 (= K328), E387 (= E382), F389 (= F384)
4i2rA 2.15 angstroms x-ray crystal structure of NAD- and alternative substrate-bound 2-aminomuconate 6-semialdehyde dehydrogenase from pseudomonas fluorescens (see paper)
40% identity, 97% coverage: 6:478/488 of query aligns to 5:483/483 of 4i2rA
- active site: N152 (= N148), K175 (= K171), E251 (= E244), C285 (= C278), E387 (= E382), E464 (= E459)
- binding (2E,4E)-2-hydroxy-6-oxohexa-2,4-dienoic acid: R103 (= R103), L157 (≠ T153), C285 (= C278), Y445 (≠ N440), R447 (= R442), F453 (= F448)
- binding nicotinamide-adenine-dinucleotide: I148 (≠ V144), S149 (= S145), W151 (= W147), N152 (= N148), K175 (= K171), E178 (= E174), G208 (= G204), F227 (= F222), T228 (= T223), G229 (= G224), E230 (≠ G225), T233 (= T228), E251 (= E244), L252 (= L245), G253 (= G246), C285 (= C278), E387 (= E382), F389 (= F384)
4i25A 2.00 angstroms x-ray crystal structure of NAD- and substrate-bound 2- aminomuconate 6-semialdehyde dehydrogenase from pseudomonas fluorescens (see paper)
40% identity, 97% coverage: 6:478/488 of query aligns to 5:483/483 of 4i25A
- active site: N152 (= N148), K175 (= K171), E251 (= E244), C285 (= C278), E387 (= E382), E464 (= E459)
- binding (2E,4E)-2-amino-6-oxohexa-2,4-dienoic acid: R103 (= R103), L157 (≠ T153), C285 (= C278), Y445 (≠ N440), R447 (= R442), F453 (= F448)
- binding nicotinamide-adenine-dinucleotide: I148 (≠ V144), S149 (= S145), P150 (= P146), W151 (= W147), N152 (= N148), K175 (= K171), E178 (= E174), G208 (= G204), G213 (= G208), F227 (= F222), T228 (= T223), G229 (= G224), E230 (≠ G225), T233 (= T228), E251 (= E244), L252 (= L245), C285 (= C278), E387 (= E382), F389 (= F384)
5kllA Crystal structure of 2-hydroxymuconate-6-semialdehyde derived tautomeric intermediate in 2-aminomuconate 6-semialdehyde dehydrogenase n169d (see paper)
40% identity, 98% coverage: 2:478/488 of query aligns to 1:483/483 of 5kllA
- active site: D152 (≠ N148), K175 (= K171), E251 (= E244), C285 (= C278), E387 (= E382), E464 (= E459)
- binding (3~{E},5~{E})-6-oxidanyl-2-oxidanylidene-hexa-3,5-dienoic acid: R103 (= R103), D152 (≠ N148), L157 (≠ T153), W160 (= W156), C285 (= C278), Y445 (≠ N440), R447 (= R442), F453 (= F448)
5kj5B Crystal structure of 2-aminomuconate 6-semialdehyde dehydrogenase n169d in complex with NAD+ (see paper)
40% identity, 98% coverage: 2:478/488 of query aligns to 2:484/484 of 5kj5B
- active site: D153 (≠ N148), K176 (= K171), E252 (= E244), C286 (= C278), E388 (= E382), E465 (= E459)
- binding nicotinamide-adenine-dinucleotide: I149 (≠ V144), S150 (= S145), P151 (= P146), W152 (= W147), D153 (≠ N148), L158 (≠ T153), K176 (= K171), G209 (= G204), K210 (≠ A205), G214 (= G208), F228 (= F222), T229 (= T223), G230 (= G224), E231 (≠ G225), T234 (= T228), E252 (= E244), L253 (= L245), C286 (= C278), E388 (= E382), F390 (= F384), F454 (= F448)
P20000 Aldehyde dehydrogenase, mitochondrial; ALDH class 2; ALDH-E2; ALDHI; EC 1.2.1.3 from Bos taurus (Bovine) (see 2 papers)
43% identity, 94% coverage: 19:478/488 of query aligns to 57:515/520 of P20000
Sites not aligning to the query:
- 1:21 modified: transit peptide, Mitochondrion
4ou2A A 2.15 angstroms x-ray crystal structure of e268a 2-aminomuconate 6- semialdehyde dehydrogenase catalytic intermediate from pseudomonas fluorescens (see paper)
40% identity, 97% coverage: 6:478/488 of query aligns to 5:483/483 of 4ou2A
- active site: N152 (= N148), K175 (= K171), A251 (≠ E244), C285 (= C278), E387 (= E382), E464 (= E459)
- binding (2Z,4E)-2,6-dihydroxyhexa-2,4-dienoic acid: R103 (= R103), L157 (≠ T153), C285 (= C278), Y445 (≠ N440), R447 (= R442), F453 (= F448)
- binding nicotinamide-adenine-dinucleotide: I148 (≠ V144), S149 (= S145), P150 (= P146), W151 (= W147), N152 (= N148), K175 (= K171), G208 (= G204), G213 (= G208), E214 (≠ D209), F227 (= F222), T228 (= T223), G229 (= G224), E230 (≠ G225), T233 (= T228), A251 (≠ E244), L252 (= L245), G253 (= G246), C285 (= C278), E387 (= E382), F389 (= F384)
4o6rA Crystal structure of a putative aldehyde dehydrogenase from burkholderia cenocepacia
41% identity, 98% coverage: 7:486/488 of query aligns to 7:487/489 of 4o6rA
- active site: N150 (= N148), K173 (= K171), E248 (= E244), C282 (= C278), E383 (= E382), E460 (= E459)
- binding adenosine monophosphate: I146 (≠ V144), V147 (≠ S145), K173 (= K171), G206 (= G204), G210 (= G208), Q211 (≠ D209), F224 (= F222), G226 (= G224), S227 (≠ G225), T230 (= T228), R233 (≠ N231)
4fr8A Crystal structure of human aldehyde dehydrogenase-2 in complex with nitroglycerin (see paper)
42% identity, 94% coverage: 19:478/488 of query aligns to 30:488/493 of 4fr8A
- active site: N162 (= N148), K185 (= K171), Q261 (≠ E244), C295 (= C278), E392 (= E382), E469 (= E459)
- binding nicotinamide-adenine-dinucleotide: I158 (≠ V144), I159 (≠ S145), W161 (= W147), K185 (= K171), G218 (= G204), G222 (= G208), A223 (≠ D209), F236 (= F222), G238 (= G224), S239 (≠ G225), I242 (≠ T228), Q342 (≠ H325), K345 (= K328), E392 (= E382), F394 (= F384)
- binding propane-1,2,3-triyl trinitrate: F163 (≠ V149), L166 (≠ M152), W170 (= W156), F289 (≠ S272), S294 (≠ R277), C295 (= C278), D450 (≠ N440), F452 (≠ R442)
4fr8C Crystal structure of human aldehyde dehydrogenase-2 in complex with nitroglycerin (see paper)
42% identity, 94% coverage: 19:478/488 of query aligns to 33:491/496 of 4fr8C
- active site: N165 (= N148), K188 (= K171), Q264 (≠ E244), C298 (= C278), E395 (= E382), E472 (= E459)
- binding nicotinamide-adenine-dinucleotide: I161 (≠ V144), I162 (≠ S145), W164 (= W147), K188 (= K171), G221 (= G204), G225 (= G208), A226 (≠ D209), F239 (= F222), G241 (= G224), S242 (≠ G225), I245 (≠ T228), Q345 (≠ H325), E395 (= E382), F397 (= F384)
5l13A Structure of aldh2 in complex with 2p3 (see paper)
42% identity, 94% coverage: 19:478/488 of query aligns to 31:489/494 of 5l13A
- active site: N163 (= N148), K186 (= K171), E262 (= E244), C296 (= C278), E393 (= E382), E470 (= E459)
- binding 2,3,5-trimethyl-6-propyl-7H-furo[3,2-g][1]benzopyran-7-one: F164 (≠ V149), M168 (≠ T153), W171 (= W156), F290 (≠ S272), C295 (≠ R277), C296 (= C278), C297 (≠ T279), D451 (≠ N440), F453 (≠ R442)
4kwgA Crystal structure analysis of aldh2+aldib13 (see paper)
42% identity, 94% coverage: 19:478/488 of query aligns to 31:489/494 of 4kwgA
- active site: N163 (= N148), K186 (= K171), E262 (= E244), C296 (= C278), E393 (= E382), E470 (= E459)
- binding 7-bromo-5-methyl-1H-indole-2,3-dione: F164 (≠ V149), M168 (≠ T153), C295 (≠ R277), C296 (= C278), C297 (≠ T279), D451 (≠ N440), F453 (≠ R442)
4kwfA Crystal structure analysis of aldh2+aldib33 (see paper)
42% identity, 94% coverage: 19:478/488 of query aligns to 31:489/494 of 4kwfA
- active site: N163 (= N148), K186 (= K171), E262 (= E244), C296 (= C278), E393 (= E382), E470 (= E459)
- binding 1-benzyl-1H-indole-2,3-dione: F164 (≠ V149), M168 (≠ T153), W171 (= W156), E262 (= E244), C295 (≠ R277), C296 (= C278), C297 (≠ T279), D451 (≠ N440), F453 (≠ R442), F459 (= F448)
3sz9A Crystal structure of human aldh2 modified with the beta-elimination product of aldi-3; 1-(4-ethylbenzene)prop-2-en-1-one (see paper)
42% identity, 94% coverage: 19:478/488 of query aligns to 31:489/494 of 3sz9A
- active site: N163 (= N148), K186 (= K171), E262 (= E244), C296 (= C278), E393 (= E382), E470 (= E459)
- binding 1-(4-ethylphenyl)propan-1-one: F164 (≠ V149), C295 (≠ R277), C296 (= C278), D451 (≠ N440), F453 (≠ R442), F459 (= F448)
3injA Human mitochondrial aldehyde dehydrogenase complexed with agonist alda-1 (see paper)
42% identity, 94% coverage: 19:478/488 of query aligns to 31:489/494 of 3injA
- active site: N163 (= N148), K186 (= K171), E262 (= E244), C296 (= C278), E393 (= E382), E470 (= E459)
- binding N-(1,3-benzodioxol-5-ylmethyl)-2,6-dichlorobenzamide: M118 (≠ R103), F164 (≠ V149), L167 (≠ M152), F286 (= F268), F290 (≠ S272), D451 (≠ N440), F453 (≠ R442)
Query Sequence
>WP_008807572.1 NCBI__GCF_000025465.1:WP_008807572.1
MKKINHWINGKNVAGADYFHTTNPATGEVLAEVASGGEAEINQAVAAAKEAFPKWANLPM
KERARLMRRLGDLIDQNVPEIAAMETADTGLPIHQTKNVLIPRASHNFEFFAEVCQQMNG
KTYPVDDKMLNYTLVQPVGVCALVSPWNVPFMTATWKVAPCLALGNTAVLKMSELSPLTA
DRLGELALEAGIPAGVLNVVQGYGATAGDALVRHHDVRAVSFTGGTATGRNIMKNAGLKK
YSMELGGKSPVLIFEDADIERALDAALFTIFSINGERCTAGSRIFIQQSIYPEFVKRFAE
RANRLRVGDPTDPNTQVGALISKQHWEKVSGYIRLGIEEGATLLAGGADKPSDLPAHLKA
GNFLRPTVLADVDNRMRVAQEEIFGPVACLLPFKDEAEGLRLANDVEYGLASYIWTQDVS
KVLRLARGIEAGMVFVNTQNVRDLRQPFGGVKASGTGREGGEYSFEVFAEMKNVCISMGD
HPIPKWGV
Or try a new SitesBLAST search
SitesBLAST's Database
SitesBLAST's database includes
(1) SwissProt
entries with experimentally-supported functional features;
and (2) protein structures with bound ligands, from the
BioLip database.
by Morgan Price,
Arkin group
Lawrence Berkeley National Laboratory