SitesBLAST
Comparing WP_009126569.1 NCBI__GCF_000195635.1:WP_009126569.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures
Found 20 (the maximum) hits to proteins with known functional sites (download)
3eq6A Crystal structure of human acyl-coa synthetase medium-chain family member 2a (l64p mutation) in a ternary complex with products (see paper)
40% identity, 96% coverage: 25:551/551 of query aligns to 4:533/533 of 3eq6A
- active site: T185 (= T203), T328 (= T346), E329 (= E347), N431 (≠ K449), R436 (= R454), K521 (= K539)
- binding adenosine monophosphate: G302 (= G320), E303 (= E321), S304 (≠ A322), E323 (= E341), S324 (≠ G342), Y325 (≠ F343), G326 (= G344), Q327 (= Q345), T328 (= T346), D410 (= D428), F422 (= F440), R425 (= R443), R436 (= R454)
- binding Butyryl Coenzyme A: W229 (= W247), F255 (= F273), I277 (≠ T295), V301 (≠ A319), S433 (= S451), G434 (= G452), Y435 (= Y453), P501 (= P519), Y502 (= Y520), Y504 (= Y522), R506 (= R524)
2wd9A Crystal structure of human acyl-coa synthetase medium-chain family member 2a (l64p mutation) in complex with ibuprofen (see paper)
40% identity, 96% coverage: 25:551/551 of query aligns to 4:533/533 of 2wd9A
- active site: T185 (= T203), T328 (= T346), E329 (= E347), N431 (≠ K449), R436 (= R454), K521 (= K539)
- binding ibuprofen: I230 (≠ G248), L231 (≠ K249), G326 (= G344), Q327 (= Q345), T328 (= T346), R436 (= R454)
2vzeA Crystal structure of human acyl-coa synthetase medium-chain family member 2a (l64p mutation) in complex with amp (see paper)
40% identity, 96% coverage: 25:551/551 of query aligns to 4:533/533 of 2vzeA
- active site: T185 (= T203), T328 (= T346), E329 (= E347), N431 (≠ K449), R436 (= R454), K521 (= K539)
- binding adenosine monophosphate: W229 (= W247), G302 (= G320), E303 (= E321), S304 (≠ A322), E323 (= E341), Y325 (≠ F343), G326 (= G344), Q327 (= Q345), T328 (= T346), D410 (= D428), F422 (= F440), R425 (= R443), R436 (= R454)
3c5eA Crystal structure of human acyl-coa synthetase medium-chain family member 2a (l64p mutation) in complex with atp (see paper)
40% identity, 96% coverage: 25:551/551 of query aligns to 7:536/536 of 3c5eA
- active site: T188 (= T203), T331 (= T346), E332 (= E347), N434 (≠ K449), R439 (= R454), K524 (= K539)
- binding adenosine-5'-triphosphate: T188 (= T203), S189 (= S204), G190 (= G205), T191 (= T206), S192 (≠ T207), G305 (= G320), E306 (= E321), S307 (≠ A322), G329 (= G344), Q330 (= Q345), T331 (= T346), D413 (= D428), F425 (= F440), R428 (= R443), K524 (= K539)
- binding magnesium ion: M450 (= M465), H452 (= H467), V455 (= V470)
3b7wA Crystal structure of human acyl-coa synthetase medium-chain family member 2a, with l64p mutation (see paper)
40% identity, 96% coverage: 25:551/551 of query aligns to 8:537/537 of 3b7wA
Q08AH3 Acyl-coenzyme A synthetase ACSM2A, mitochondrial; Acyl-CoA synthetase medium-chain family member 2A; Benzoate--CoA ligase; Butyrate--CoA ligase 2A; Butyryl-coenzyme A synthetase 2A; Middle-chain acyl-CoA synthetase 2A; EC 6.2.1.2; EC 6.2.1.25 from Homo sapiens (Human) (see 4 papers)
39% identity, 96% coverage: 25:551/551 of query aligns to 40:569/577 of Q08AH3
- Q139 (≠ L118) binding CoA
- 221:229 (vs. 203:211, 78% identical) binding ATP
- ESYGQT 359:364 (≠ EGFGQT 341:346) binding ATP
- T364 (= T346) binding substrate
- D446 (= D428) binding ATP
- R461 (= R443) binding ATP
- SGY 469:471 (= SGY 451:453) binding CoA
- R472 (= R454) binding substrate
- R501 (= R483) binding CoA
- S513 (≠ K495) to L: in dbSNP:rs1133607
- K532 (= K514) binding CoA
- YPR 540:542 (= YPR 522:524) binding CoA
- K557 (= K539) binding ATP
3dayA Crystal structure of human acyl-coa synthetase medium-chain family member 2a (l64p mutation) in complex with amp-cpp (see paper)
40% identity, 96% coverage: 25:551/551 of query aligns to 8:535/535 of 3dayA
- active site: T189 (= T203), T332 (= T346), E333 (= E347), N435 (≠ K449), R440 (= R454), K523 (= K539)
- binding diphosphomethylphosphonic acid adenosyl ester: T189 (= T203), S190 (= S204), G191 (= G205), T192 (= T206), S193 (≠ T207), K197 (= K211), G306 (= G320), E307 (= E321), S308 (≠ A322), Y329 (≠ F343), G330 (= G344), Q331 (= Q345), T332 (= T346), D414 (= D428), F426 (= F440), R429 (= R443), K523 (= K539)
- binding magnesium ion: M451 (= M465), H453 (= H467), V456 (= V470)
3gpcA Crystal structure of human acyl-coa synthetase medium-chain family member 2a (l64p mutation) in a complex with coa (see paper)
40% identity, 96% coverage: 25:551/551 of query aligns to 5:532/532 of 3gpcA
- active site: T186 (= T203), T327 (= T346), E328 (= E347), N430 (≠ K449), R435 (= R454), K520 (= K539)
- binding coenzyme a: G301 (= G320), E302 (= E321), S303 (≠ A322), E322 (= E341), Y324 (≠ F343), G325 (= G344), Q326 (= Q345), T327 (= T346), D409 (= D428), F421 (= F440), R424 (= R443), T516 (= T535), K520 (= K539), Q522 (≠ R541)
- binding magnesium ion: H448 (= H467), V451 (= V470)
8bitA Crystal structure of acyl-coa synthetase from metallosphaera sedula in complex with coenzyme a and acetyl-amp
39% identity, 94% coverage: 29:545/551 of query aligns to 37:543/562 of 8bitA
- binding [[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] ethanoate: W252 (= W252), G321 (= G320), E322 (= E321), P323 (≠ A322), D342 (≠ E341), F343 (≠ G342), Y344 (≠ F343), Q346 (= Q345), T347 (= T346), D428 (= D428), F440 (= F440), K449 (= K449), R454 (= R454)
- binding coenzyme a: N128 (≠ L118), W247 (= W247), K249 (= K249), K273 (= K272), L274 (≠ F273), Q300 (≠ F299), D452 (≠ G452), Y453 (= Y453), R483 (= R483), P517 (= P519)
8biqB Crystal structure of acyl-coa synthetase from metallosphaera sedula in complex with acetyl-amp
39% identity, 94% coverage: 28:545/551 of query aligns to 34:541/561 of 8biqB
- binding [[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] ethanoate: G319 (= G320), E320 (= E321), P321 (≠ A322), D340 (≠ E341), F341 (≠ G342), Y342 (≠ F343), G343 (= G344), Q344 (= Q345), T345 (= T346), D426 (= D428), F438 (= F440), K447 (= K449), R452 (= R454)
8biqA Crystal structure of acyl-coa synthetase from metallosphaera sedula in complex with acetyl-amp
39% identity, 94% coverage: 28:545/551 of query aligns to 35:542/562 of 8biqA
8rplB Amp-forming acetyl-coa synthetase from chloroflexota bacterium with bound acetyl amp (see paper)
31% identity, 96% coverage: 21:549/551 of query aligns to 71:621/630 of 8rplB
- binding [[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] ethanoate: G391 (= G320), E392 (= E321), P393 (≠ A322), T416 (≠ G342), W417 (≠ F343), W418 (≠ G344), Q419 (= Q345), T420 (= T346), D502 (= D428), R517 (= R443), K523 (= K449), R528 (= R454)
- binding magnesium ion: V539 (≠ M465), H541 (= H467)
4wv3B Crystal structure of the anthranilate coa ligase auaeii in complex with anthranoyl-amp (see paper)
30% identity, 89% coverage: 59:547/551 of query aligns to 34:510/518 of 4wv3B
- active site: S175 (≠ T203), T320 (= T346), E321 (= E347), K418 (= K449), W423 (≠ R454), K502 (= K539)
- binding 5'-O-[(S)-[(2-aminobenzoyl)oxy](hydroxy)phosphoryl]adenosine: F220 (≠ W247), T221 (≠ G248), F222 (≠ K249), A293 (= A319), S294 (≠ G320), E295 (= E321), A296 (= A322), G316 (= G342), I317 (≠ F343), G318 (= G344), C319 (≠ Q345), T320 (= T346), D397 (= D428), H409 (≠ F440), R412 (= R443), K502 (= K539)
8w0dA Crystal structure of acetyl-coa synthetase 2 from candida albicans in complex with an isopropyl amp ester inhibitor
30% identity, 94% coverage: 29:547/551 of query aligns to 87:632/666 of 8w0dA
- binding 5'-O-{(R)-hydroxy[(propan-2-yl)oxy]phosphoryl}adenosine: G398 (= G320), E399 (= E321), P400 (≠ A322), T423 (≠ G342), Y424 (≠ F343), W425 (≠ G344), Q426 (= Q345), T427 (= T346), D513 (= D428), I525 (≠ F440), R528 (= R443), R539 (= R454)
8v4rA Crystal structure of acetyl-coa synthetase 2 in complex with amp and coa from candida albicans (see paper)
30% identity, 94% coverage: 29:547/551 of query aligns to 87:632/666 of 8v4rA
- binding adenosine monophosphate: G398 (= G320), E399 (= E321), P400 (≠ A322), T423 (≠ G342), Y424 (≠ F343), Q426 (= Q345), T427 (= T346), D513 (= D428), I525 (≠ F440), R528 (= R443), R539 (= R454)
- binding coenzyme a: F175 (≠ T116), R203 (vs. gap), R206 (vs. gap), G316 (≠ A243), H538 (≠ Y453), R599 (≠ K514), F605 (≠ Y520)
8w0cA Crystal structure of acetyl-coa synthetase 2 from candida albicans in complex with a cyclopentyl ester amp inhibitor
30% identity, 94% coverage: 29:547/551 of query aligns to 88:633/667 of 8w0cA
- binding 5'-O-[(S)-(cyclopentyloxy)(hydroxy)phosphoryl]adenosine: G399 (= G320), E400 (= E321), P401 (≠ A322), T424 (≠ G342), Y425 (≠ F343), W426 (≠ G344), Q427 (= Q345), T428 (= T346), D514 (= D428), R529 (= R443), R540 (= R454)
8w0bA Crystal structure of acetyl-coa synthetase 2 from candida albicans in complex with a cyclopropyl amp ester inhibitor
30% identity, 94% coverage: 29:547/551 of query aligns to 88:633/667 of 8w0bA
- binding 5'-O-[(R)-(cyclopropyloxy)(hydroxy)phosphoryl]adenosine: V398 (≠ A319), G399 (= G320), E400 (= E321), P401 (≠ A322), T424 (≠ G342), Y425 (≠ F343), W426 (≠ G344), Q427 (= Q345), T428 (= T346), D514 (= D428), I526 (≠ F440), R529 (= R443), R540 (= R454)
7kdsA Crystal structure of acetyl-coa synthetase 2 in complex with adenosine-5'-propylphosphate from candida albicans
31% identity, 94% coverage: 29:547/551 of query aligns to 87:628/654 of 7kdsA
- active site: T275 (= T203), T427 (= T346), E428 (= E347), N534 (≠ K449), R539 (= R454), K620 (= K539)
- binding adenosine-5'-monophosphate-propyl ester: I321 (≠ G248), G398 (= G320), E399 (= E321), P400 (≠ A322), D422 (≠ E341), T423 (≠ G342), Y424 (≠ F343), W425 (≠ G344), Q426 (= Q345), T427 (= T346), D513 (= D428), R528 (= R443), N534 (≠ K449), R539 (= R454)
8w0jA Crystal structure of acetyl-coa synthetase 2 from candida albicans in complex with a propyne amp ester inhibitor
30% identity, 94% coverage: 29:547/551 of query aligns to 88:628/662 of 8w0jA
- binding 5'-O-{(S)-hydroxy[(prop-2-yn-1-yl)oxy]phosphoryl}adenosine: G399 (= G320), E400 (= E321), P401 (≠ A322), T424 (≠ G342), Y425 (≠ F343), W426 (≠ G344), Q427 (= Q345), T428 (= T346), D514 (= D428), I526 (≠ F440), R529 (= R443), R540 (= R454)
8v4pA Crystal structure of acetyl-coa synthetase 2 in complex with adenosine-5'-allylphosphate from candida albicans
30% identity, 94% coverage: 29:547/551 of query aligns to 87:627/660 of 8v4pA
- binding 5'-O-{(S)-hydroxy[(prop-2-en-1-yl)oxy]phosphoryl}adenosine: P152 (≠ K93), A176 (≠ H117), G177 (≠ L118), R203 (vs. gap), T208 (≠ S142), D317 (= D244), E342 (≠ D269), G343 (≠ H270), P345 (≠ K272), G398 (= G320), E399 (= E321), P400 (≠ A322), T423 (≠ G342), W425 (≠ G344), Q426 (= Q345), T427 (= T346), D513 (= D428), I525 (≠ F440), R528 (= R443), R539 (= R454)
Query Sequence
>WP_009126569.1 NCBI__GCF_000195635.1:WP_009126569.1
MVERFLSQTSFTSQEDFIKNFKINVPENFNFGYDVVDAWAEAEPDKPALLWTNDKGEHRQ
FTFADMKRYTDMTASYFQSLGIGRGDMVMLILKRRFEFWFSIVALHKLGAVVIPATHLLT
KKDIVYRCNAADIKMIVCAGESVITDHITAAMPESPTVRKLVSVGPEIAEGFEDFHKGIG
TAAPFVKPEQPNTNDDISLMYFTSGTTGEPKMVAHDFTYPLGHIVTGSFWHNLTEESLHL
TIADTGWGKAVWGKLYGQWIAGANVFVYDHEKFTPADILEKIQDYHVTSLCAPPTIFRFL
IHEDLTKYNLSSLKYCTIAGEALNPAVFETFKKLTGIKLMEGFGQTETTLTVATMPWMEP
KPGSMGLPNPQYDVDLIDYDGRSVEAGEQGQIVIRTDKGKPLGLFKEYYRDANRTHEAWH
DGIYYTGDVAWKDEDGYLWFVGRADDVIKSSGYRIGPFEVESALMTHPAVVECAITGVPD
EIRGQVVKATIVLAKDYKERAGEGLIKELQNHVKKVTAPYKYPRVIEFVDELPKTISGKI
RRVEIRKNDEK
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SitesBLAST's Database
SitesBLAST's database includes
(1) SwissProt
entries with experimentally-supported functional features;
and (2) protein structures with bound ligands, from the
BioLip database.
by Morgan Price,
Arkin group
Lawrence Berkeley National Laboratory