SitesBLAST
Comparing WP_009135094.1 NCBI__GCF_000231275.1:WP_009135094.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
1wqaA Crystal structure of pyrococcus horikoshii phosphomannomutase/phosphoglucomutase complexed with mg2+
40% identity, 94% coverage: 12:445/462 of query aligns to 6:439/455 of 1wqaA
- active site: R11 (vs. gap), S101 (= S106), H102 (= H107), K111 (= K116), D243 (= D250), D245 (= D252), D247 (= D254), R248 (= R255), G330 (= G336), R340 (= R346)
- binding magnesium ion: S101 (= S106), D243 (= D250), D245 (= D252), D247 (= D254)
4il8A Crystal structure of an h329a mutant of p. Aeruginosa pmm/pgm (see paper)
30% identity, 89% coverage: 49:459/462 of query aligns to 47:451/459 of 4il8A
- active site: S104 (= S106), H105 (= H107), K114 (= K116), D238 (= D250), D240 (= D252), D242 (= D254), R243 (= R255), A325 (≠ G336), D336 (≠ R346)
- binding magnesium ion: S104 (= S106), D238 (= D250), D240 (= D252), D242 (= D254)
Sites not aligning to the query:
2h5aX Complex of the enzyme pmm/pgm with xylose 1-phosphate (see paper)
30% identity, 89% coverage: 49:459/462 of query aligns to 43:447/455 of 2h5aX
- active site: H101 (= H107), D234 (= D250), D236 (= D252), D238 (= D254), R239 (= R255), D332 (≠ R346)
- binding 1-O-phosphono-alpha-D-xylopyranose: T298 (≠ V313), G299 (= G314), H300 (≠ E315), E317 (= E332), S319 (≠ N334), H321 (≠ G336), R413 (= R425), S415 (= S427), N416 (= N428), T417 (= T429)
- binding zinc ion: S100 (= S106), D234 (= D250), D236 (= D252), D238 (= D254)
Sites not aligning to the query:
2h4lX Complex of pmm/pgm with ribose 1-phosphate (see paper)
30% identity, 89% coverage: 49:459/462 of query aligns to 43:447/455 of 2h4lX
- active site: H101 (= H107), D234 (= D250), D236 (= D252), D238 (= D254), R239 (= R255), D332 (≠ R346)
- binding 1-O-phosphono-alpha-D-ribofuranose: S100 (= S106), T298 (≠ V313), E317 (= E332), R413 (= R425), S415 (= S427), N416 (= N428), T417 (= T429)
- binding zinc ion: S100 (= S106), D234 (= D250), D236 (= D252), D238 (= D254)
Sites not aligning to the query:
2fkfA Phosphomannomutase/phosphoglucomutase from pseudomonas aeruginosa with alpha-d-glucose 1,6-bisphosphate bound (see paper)
30% identity, 89% coverage: 49:459/462 of query aligns to 43:447/455 of 2fkfA
- active site: S100 (= S106), H101 (= H107), K110 (= K116), D234 (= D250), D236 (= D252), D238 (= D254), R239 (= R255), H321 (≠ G336), D332 (≠ R346)
- binding 1,6-di-O-phosphono-alpha-D-glucopyranose: H101 (= H107), S319 (≠ N334), R413 (= R425), S415 (= S427), N416 (= N428), T417 (= T429)
- binding zinc ion: S100 (= S106), D234 (= D250), D236 (= D252), D238 (= D254)
Sites not aligning to the query:
1pcmX Enzyme-ligand complex of p. Aeruginosa pmm/pgm (see paper)
30% identity, 89% coverage: 49:459/462 of query aligns to 43:447/455 of 1pcmX
- active site: S100 (= S106), H101 (= H107), K110 (= K116), D234 (= D250), D236 (= D252), D238 (= D254), R239 (= R255), H321 (≠ G336), D332 (≠ R346)
- binding 6-O-phosphono-alpha-D-mannopyranose: S100 (= S106), T298 (≠ V313), G299 (= G314), H300 (≠ E315), E317 (= E332), S319 (≠ N334), H321 (≠ G336), R413 (= R425), S415 (= S427)
- binding zinc ion: S100 (= S106), D234 (= D250), D236 (= D252), D238 (= D254)
Sites not aligning to the query:
1p5gX Enzyme-ligand complex of p. Aeruginosa pmm/pgm (see paper)
30% identity, 89% coverage: 49:459/462 of query aligns to 43:447/455 of 1p5gX
- active site: S100 (= S106), H101 (= H107), K110 (= K116), D234 (= D250), D236 (= D252), D238 (= D254), R239 (= R255), H321 (≠ G336), D332 (≠ R346)
- binding 6-O-phosphono-alpha-D-glucopyranose: S100 (= S106), K277 (≠ S292), G299 (= G314), H300 (≠ E315), E317 (= E332), S319 (≠ N334), H321 (≠ G336), R413 (= R425), S415 (= S427), N416 (= N428), T417 (= T429)
- binding zinc ion: S100 (= S106), D234 (= D250), D236 (= D252), D238 (= D254)
Sites not aligning to the query:
1p5dX Enzyme-ligand complex of p. Aeruginosa pmm/pgm (see paper)
30% identity, 89% coverage: 49:459/462 of query aligns to 43:447/455 of 1p5dX
- active site: S100 (= S106), H101 (= H107), K110 (= K116), D234 (= D250), D236 (= D252), D238 (= D254), R239 (= R255), H321 (≠ G336), D332 (≠ R346)
- binding 1-O-phosphono-alpha-D-glucopyranose: S100 (= S106), R239 (= R255), T298 (≠ V313), G299 (= G314), H300 (≠ E315), E317 (= E332), S319 (≠ N334), H321 (≠ G336), R413 (= R425), S415 (= S427), T417 (= T429)
- binding zinc ion: S100 (= S106), D234 (= D250), D236 (= D252), D238 (= D254)
Sites not aligning to the query:
1pcjX Enzyme-ligand complex of p. Aeruginosa pmm/pgm (see paper)
30% identity, 89% coverage: 49:459/462 of query aligns to 46:450/458 of 1pcjX
- active site: S103 (= S106), H104 (= H107), K113 (= K116), D237 (= D250), D239 (= D252), D241 (= D254), R242 (= R255), H324 (≠ G336), D335 (≠ R346)
- binding 1-O-phosphono-alpha-D-mannopyranose: S103 (= S106), T301 (≠ V313), G302 (= G314), E320 (= E332), S322 (≠ N334), H324 (≠ G336), R416 (= R425), S418 (= S427), N419 (= N428), T420 (= T429)
- binding zinc ion: S103 (= S106), D237 (= D250), D239 (= D252), D241 (= D254)
Sites not aligning to the query:
P26276 Phosphomannomutase/phosphoglucomutase; PMM / PGM; EC 5.4.2.2; EC 5.4.2.8 from Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) (see 10 papers)
30% identity, 89% coverage: 49:459/462 of query aligns to 51:455/463 of P26276
- S108 (= S106) binding via phosphate group; modified: Phosphoserine; mutation S->A,V: About 5% activity, still subject to substrate inhibition and requires G1,6P as an activator; phosphorylation occurs at a different site.; mutation to C: KM for G1P unchanged, kcat decreases 24-fold; G1,6P stimulates reaction by 2-3 orders of magnitude. No stable protein phosphorylation detected, altered ligation of metal residue.
- N110 (= N108) mutation to A: KM halves, decreases processivity as dissociation of G1,6P intermediate increases 30-fold.
- D242 (= D250) binding Mg(2+)
- D244 (= D252) binding Mg(2+)
- D246 (= D254) binding Mg(2+)
- R247 (= R255) mutation to A: Small reduction in KM, small increase in dissociation of G1,6P intermediate.
- R262 (≠ Y270) mutation to A: Increases KM 2-fold, decreases kcat 9-fold for G1P. Alters flexibility of the hinge region.
- K285 (≠ S292) binding alpha-D-glucose 1-phosphate
- H308 (≠ E315) binding alpha-D-glucose 1-phosphate; binding alpha-D-mannose 1-phosphate
- E325 (= E332) mutation to A: Reduces KM and Vmax approximately 2-fold.
- EMSGH 325:329 (≠ EGNGG 332:336) binding alpha-D-glucose 1-phosphate; binding alpha-D-mannose 1-phosphate
- H329 (≠ G336) mutation to A: No phosphoglucomutase activity using G1P as substrate, protein is less easily phosphorylated, no significant change in structure.
- P368 (= P374) mutation to G: Increases KM 2-fold, decreases kcat 6-fold for G1P. Alters flexibility of the hinge region, structure is less compact.
- R421 (= R425) mutation to C: Loss of phosphomannomutase activity, very low phosphoglucomutase activity.
- RASNT 421:425 (≠ RKSNT 425:429) binding alpha-D-glucose 1-phosphate; binding alpha-D-mannose 1-phosphate
Sites not aligning to the query:
- 1 modified: Initiator methionine, Removed
- 15 R→A: KM halves, decreases processivity as dissociation of G1,6P intermediate increases 25-fold.
- 17 binding alpha-D-glucose 1-phosphate; binding alpha-D-mannose 1-phosphate
- 20 R→A: No phosphoglucomutase activity.
Q02E40 Phosphomannomutase/phosphoglucomutase; PMM / PGM; EC 5.4.2.2; EC 5.4.2.8 from Pseudomonas aeruginosa (strain UCBPP-PA14) (see paper)
30% identity, 89% coverage: 49:459/462 of query aligns to 51:455/463 of Q02E40