Comparing WP_009141894.1 NCBI__GCF_000225705.1:WP_009141894.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 4 hits to proteins with known functional sites (download)
P69786 PTS system glucose-specific EIICB component; EIICB-Glc; EII-Glc; EC 2.7.1.199 from Escherichia coli (strain K12) (see 5 papers)
29% identity, 99% coverage: 4:527/530 of query aligns to 8:471/477 of P69786
P09323 PTS system N-acetylglucosamine-specific EIICBA component; EIICBA-Nag; EII-Nag; EC 2.7.1.193 from Escherichia coli (strain K12) (see paper)
28% identity, 99% coverage: 6:530/530 of query aligns to 8:466/648 of P09323
Sites not aligning to the query:
6bvgA Crystal structure of bcmalt t280c-e54c crosslinked by divalent mercury (see paper)
29% identity, 78% coverage: 6:419/530 of query aligns to 6:445/447 of 6bvgA
1o2fB Complex of enzyme iiaglc and iibglc phosphocarrier protein hpr from escherichia coli nmr, restrained regularized mean structure (see paper)
41% identity, 12% coverage: 456:518/530 of query aligns to 2:63/77 of 1o2fB
>WP_009141894.1 NCBI__GCF_000225705.1:WP_009141894.1
MMQKIQKFGGAMFTPVMLFAFAGVVIGFGTLFTTEVIFGPLAAPGTMWYGVWNVILQGGW
TVFNQLPLLFAVSLPIGLANKQNARCCMEALVGYLTFQYFVSTMLSQWGGFFGVDFAAEV
GGTSGLAMIASIKTLDMGMIGALAVSGIIIAIHNKFYEVELPEWLGVFAGSTFVYIITFF
VMLPVAFVACLGWPHVQDGIRAFQGFVATTGTLGVGVFAFLERALIPFGLHHLMYSPFYY
DNAVVDGGIYTAFATALPQIAASTDSLKELAPYAAFTCSTWSKIFGCPGIALAFFVTAKP
EKKKELLSLLIPITLTAVFCGVTEPIEFTFLFIAPPLFIVHCVLAALLAMAINMVGCVGV
FAGGIIEISSLNFIPLMANHWQQYAMALVVGLVFTVIWFVVFRFLIVKFDFKTPGREDDD
EQVKFRSKAEYRAAKNGELASGEGAKVDESDPYAVMAAEVLELLGGADNIVDVTNCVTRL
RVNVKDETLVADDPDFKSIGTSGIAKNGKGMQVIIGLKVPKVRDRFEALL
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory