Comparing WP_009545830.1 NCBI__GCF_000017845.1:WP_009545830.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
6mjpA Lptb(e163q)fgc from vibrio cholerae (see paper)
47% identity, 98% coverage: 6:238/238 of query aligns to 6:236/240 of 6mjpA
6mhzA Vanadate trapped cryo-em structure of e.Coli lptb2fg transporter (see paper)
48% identity, 99% coverage: 2:237/238 of query aligns to 2:235/235 of 6mhzA
6s8nB Cryo-em structure of lptb2fgc in complex with lipopolysaccharide (see paper)
48% identity, 99% coverage: 2:237/238 of query aligns to 2:235/238 of 6s8nB
6s8gA Cryo-em structure of lptb2fgc in complex with amp-pnp (see paper)
48% identity, 99% coverage: 2:237/238 of query aligns to 2:235/238 of 6s8gA
6mbnA Lptb e163q in complex with atp (see paper)
48% identity, 99% coverage: 2:237/238 of query aligns to 3:236/241 of 6mbnA
6b89A E. Coli lptb in complex with adp and novobiocin (see paper)
48% identity, 99% coverage: 2:236/238 of query aligns to 2:234/234 of 6b89A
4p31A Crystal structure of a selenomethionine derivative of e. Coli lptb in complex with adp-magensium (see paper)
48% identity, 99% coverage: 2:236/238 of query aligns to 2:234/234 of 4p31A
6b8bA E. Coli lptb in complex with adp and a novobiocin derivative (see paper)
48% identity, 98% coverage: 2:235/238 of query aligns to 2:233/233 of 6b8bA
1ji0A Crystal structure analysis of the abc transporter from thermotoga maritima
33% identity, 100% coverage: 1:237/238 of query aligns to 5:238/240 of 1ji0A
P69874 Spermidine/putrescine import ATP-binding protein PotA; EC 7.6.2.11 from Escherichia coli (strain K12) (see 3 papers)
30% identity, 95% coverage: 5:229/238 of query aligns to 20:239/378 of P69874
Sites not aligning to the query:
7ahhC Opua inhibited inward-facing, sbd docked (see paper)
33% identity, 95% coverage: 4:229/238 of query aligns to 32:254/382 of 7ahhC
Sites not aligning to the query:
7aheC Opua inhibited inward facing (see paper)
33% identity, 95% coverage: 4:229/238 of query aligns to 32:254/382 of 7aheC
Sites not aligning to the query:
1vciA Crystal structure of the atp-binding cassette of multisugar transporter from pyrococcus horikoshii ot3 complexed with atp (see paper)
31% identity, 95% coverage: 5:229/238 of query aligns to 9:220/353 of 1vciA
8y5iA Cryo-em structure of e.Coli spermidine transporter potd-potabc in translocation intermidiate state (see paper)
30% identity, 95% coverage: 5:229/238 of query aligns to 5:224/358 of 8y5iA
7d0aB Acinetobacter mlafedb complex in adp-vanadate trapped vclose conformation (see paper)
30% identity, 98% coverage: 5:238/238 of query aligns to 7:243/263 of 7d0aB
7d08B Acinetobacter mlafedb complex in atp-bound vtrans1 conformation (see paper)
30% identity, 98% coverage: 5:238/238 of query aligns to 7:243/263 of 7d08B
6z5uK Cryo-em structure of the a. Baumannii mlabdef complex bound to appnhp (see paper)
30% identity, 98% coverage: 5:238/238 of query aligns to 5:241/253 of 6z5uK
7ahdC Opua (e190q) occluded (see paper)
32% identity, 95% coverage: 4:229/238 of query aligns to 32:254/260 of 7ahdC
Sites not aligning to the query:
7chaI Cryo-em structure of p.Aeruginosa mlafebd with amppnp (see paper)
30% identity, 98% coverage: 5:237/238 of query aligns to 6:241/262 of 7chaI