SitesBLAST – Find functional sites

 

SitesBLAST

Comparing WP_010937022.1 NCBI__GCF_000011905.1:WP_010937022.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.

Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures

Found 1 hits to proteins with known functional sites (download)

3al0C Crystal structure of the glutamine transamidosome from thermotoga maritima in the glutamylation state. (see paper)
32% identity, 97% coverage: 2:93/95 of query aligns to 1:92/564 of 3al0C

query
sites
3al0C
K
 
K
L
 
V
N
 
T
R
 
K
E
 
D
D
 
L
V
 
V
L
 
L
H
 
H
I
 
L
A
 
E
R
 
N
L
 
L
A
 
A
K
 
R
L
 
L
G
 
E
L
 
L
E
 
S
E
 
E
D
 
D
E
 
Q
I
 
R
N
 
E
R
 
S
L
 
L
S
 
M
K
 
K
E
 
D
L
 
F
S
 
Q
A
 
E
L
 
I
L
 
L
E
 
D
H
 
Y
F
 
V
E
 
E
V
 
L
L
 
L
Q
 
N
Q
 
E
V
 
V
D
 
D
T
 
V
T
 
E
G
 
G
V
 
V
E
 
E
P
 
P
T
 
M
A
 
Y
Q
 
-
S
 
-
T
 
T
P
 
P
V
 
V
K
 
E
S
 
D
V
 
S
L
 
A
K
 
K
E
 
L
D
 
R
I
 
K
I
 
G
K
 
D
P
 
P
S
 
R
Y
 
F
D
 
F
-
 
E
-
 
M
R
 
R
E
 
D
E
 
L
I
 
I
L
 
K
S
 
K
N
 
N
A
 
F
P
 
P
R
 
E
R
 
E
E
 
K
G
 
D
D
 
G
Y
 
H
V
 
I
R
 
K
I
 
V
R
 
P
A
 
G
V
 
I

Sites not aligning to the query:

Query Sequence

>WP_010937022.1 NCBI__GCF_000011905.1:WP_010937022.1
MKLNREDVLHIARLAKLGLEEDEINRLSKELSALLEHFEVLQQVDTTGVEPTAQSTPVKS
VLKEDIIKPSYDREEILSNAPRREGDYVRIRAVME

Or try a new SitesBLAST search

SitesBLAST's Database

SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory