Comparing WP_010959504.1 NCBI__GCF_000008325.1:WP_010959504.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
8tzjA Cryo-em structure of vibrio cholerae ftse/ftsx complex (see paper)
56% identity, 99% coverage: 1:218/220 of query aligns to 2:220/220 of 8tzjA
8w6iD Cryo-em structure of escherichia coli str k12 ftsex complex with atp- gamma-s in peptidisc
57% identity, 98% coverage: 1:215/220 of query aligns to 1:215/219 of 8w6iD
P0A9R7 Cell division ATP-binding protein FtsE from Escherichia coli (strain K12) (see paper)
57% identity, 98% coverage: 1:215/220 of query aligns to 1:215/222 of P0A9R7
8hd0A Cell divisome spg hydrolysis machinery ftsex-envc
56% identity, 98% coverage: 1:215/220 of query aligns to 1:215/218 of 8hd0A
8i6rB Cryo-em structure of pseudomonas aeruginosa ftse(e163q)x/envc complex with atp in peptidisc (see paper)
54% identity, 98% coverage: 1:215/220 of query aligns to 1:215/222 of 8i6rB
8iddA Cryo-em structure of mycobacterium tuberculosis atp bound ftsex/ripc complex in peptidisc (see paper)
43% identity, 98% coverage: 1:215/220 of query aligns to 2:217/225 of 8iddA
8igqA Cryo-em structure of mycobacterium tuberculosis adp bound ftsex/ripc complex in peptidisc (see paper)
43% identity, 98% coverage: 1:215/220 of query aligns to 2:217/227 of 8igqA
A5U7B7 Cell division ATP-binding protein FtsE from Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) (see 2 papers)
43% identity, 98% coverage: 1:215/220 of query aligns to 1:216/229 of A5U7B7
6z4wA Ftse structure from streptococcus pneumoniae in complex with adp (space group p 1) (see paper)
39% identity, 97% coverage: 1:213/220 of query aligns to 3:215/230 of 6z4wA
A0A0H2ZM82 Cell division ATP-binding protein FtsE from Streptococcus pneumoniae serotype 2 (strain D39 / NCTC 7466) (see paper)
39% identity, 97% coverage: 1:213/220 of query aligns to 3:215/230 of A0A0H2ZM82
6z67B Ftse structure of streptococcus pneumoniae in complex with amppnp at 2.4 a resolution (see paper)
39% identity, 97% coverage: 1:213/220 of query aligns to 3:215/229 of 6z67B
P30750 Methionine import ATP-binding protein MetN; EC 7.4.2.11 from Escherichia coli (strain K12) (see 3 papers)
42% identity, 92% coverage: 16:217/220 of query aligns to 19:221/343 of P30750
Sites not aligning to the query:
3tuzC Inward facing conformations of the metni methionine abc transporter: cy5 semet soak crystal form (see paper)
41% identity, 92% coverage: 16:217/220 of query aligns to 20:222/344 of 3tuzC
Sites not aligning to the query:
3tuiC Inward facing conformations of the metni methionine abc transporter: cy5 native crystal form (see paper)
41% identity, 92% coverage: 16:217/220 of query aligns to 20:222/344 of 3tuiC
Sites not aligning to the query:
6cvlD Crystal structure of the escherichia coli atpgs-bound metni methionine abc transporter in complex with its metq binding protein (see paper)
41% identity, 92% coverage: 16:217/220 of query aligns to 20:222/344 of 6cvlD
Sites not aligning to the query:
P75957 Lipoprotein-releasing system ATP-binding protein LolD; EC 7.6.2.- from Escherichia coli (strain K12) (see paper)
40% identity, 98% coverage: 1:216/220 of query aligns to 5:224/233 of P75957
7mdyC Lolcde nucleotide-bound
40% identity, 98% coverage: 1:216/220 of query aligns to 2:221/226 of 7mdyC
7arlD Lolcde in complex with lipoprotein and adp (see paper)
40% identity, 98% coverage: 1:216/220 of query aligns to 2:221/222 of 7arlD
7v8iD Lolcd(e171q)e with bound amppnp in nanodiscs (see paper)
39% identity, 98% coverage: 1:216/220 of query aligns to 4:223/229 of 7v8iD
5lilA Structure of aggregatibacter actinomycetemcomitans macb bound to atpys (p21) (see paper)
37% identity, 98% coverage: 1:215/220 of query aligns to 3:220/615 of 5lilA
>WP_010959504.1 NCBI__GCF_000008325.1:WP_010959504.1
MLEFKEVYKRYPEFGEALHDVSFHIGRGERVFLTGHSGAGKSTLLKLVAVIERATRGQIV
LDGRNITRASNREIPYIRRKLGLIFQDYKLLYDRSVFDNVALPLVIAGFNPGEVSRRVRA
ALGKVGLLSKEKRLPQTLSGGEQQRVGIARAIVHKPDFILADEPTGNLDPEAAREVMDIF
RDFNDLGVTLLIASHDEQLISRCGGRVLRLQRGSLSEVGA
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory