SitesBLAST

SitesBLAST – Find functional sites

SitesBLAST

Comparing WP_010963344.1 NCBI__GCF_000008765.1:WP_010963344.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.

Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures

Found 20 (the maximum) hits to proteins with known functional sites (download)

O43175 D-3-phosphoglycerate dehydrogenase; 3-PGDH; 2-oxoglutarate reductase; Malate dehydrogenase; EC 1.1.1.95; EC 1.1.1.399; EC 1.1.1.37 from Homo sapiens (Human) (see 3 papers)
44% identity, 96% coverage: 3:296/305 of query aligns to 8:299/533 of O43175

query
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O43175

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T78 (≠ V76) binding NAD(+)
R135 (≠ K133) to W: in PHGDHD; results in a 2-fold decrease in enzyme activity with 3-phosphohydroxypyruvate, but no change in substrate affinity; dbSNP:rs267606949
RI 155:156 (= RI 153:154) binding NAD(+)
D175 (≠ N172) binding NAD(+)
T207 (≠ I204) binding NAD(+)
CAR 234:236 (= CAR 231:233) binding NAD(+)
D260 (= D257) binding NAD(+)
V261 (= V258) to M: in PHGDHD; results in a four-fold decrease in substrate affinity and a slight increase in maximal enzyme activity with 3-phosphohydroxypyruvate; dbSNP:rs267606947
HLGA 283:286 (≠ HIGA 280:283) binding NAD(+)

Sites not aligning to the query:

1 modified: Initiator methionine, Removed
2 modified: N-acetylalanine
373 A → T: in PHGDHD; results in almost undetectable enzyme activity with 3-phosphohydroxypyruvate; dbSNP:rs201553627
377 G → S: in PHGDHD; results in a 2-fold decrease in enzyme activity with 3-phosphohydroxypyruvate, but no change in substrate affinity; dbSNP:rs267606948
425 V → M: in PHGDHD; results in almost undetectable enzyme activity with 3-phosphohydroxypyruvate; dbSNP:rs121907988
490 V → M: in PHGDHD; results in almost undetectable enzyme activity with 3-phosphohydroxypyruvate; dbSNP:rs121907987

6cwaA Crystal structure phgdh in complex with nadh and 3-phosphoglycerate at 1.77 a resolution (see paper)
44% identity, 96% coverage: 3:296/305 of query aligns to 2:293/299 of 6cwaA

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binding 1,4-dihydronicotinamide adenine dinucleotide: N96 (≠ S100), A100 (≠ V104), R149 (= R153), I150 (= I154), Y168 (= Y171), D169 (≠ N172), P170 (≠ D173), I171 (= I174), H200 (= H203), T201 (≠ I204), P202 (= P205), T207 (≠ K210), C228 (= C231), A229 (= A232), R230 (= R233), H277 (= H280), G279 (= G282)

6rj3A Crystal structure of phgdh in complex with compound 15 (see paper)
44% identity, 96% coverage: 3:296/305 of query aligns to 2:293/297 of 6rj3A

query
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binding 4-[(1~{R})-1-[(2-methyl-5-phenyl-pyrazol-3-yl)carbonylamino]ethyl]benzoic acid: L145 (≠ I149), Y168 (= Y171), D169 (≠ N172), P170 (≠ D173), I171 (= I174), I172 (≠ C175), H200 (= H203), T201 (≠ I204), P202 (= P205), L210 (≠ V213)

6rj5A Crystal structure of phgdh in complex with compound 39 (see paper)
44% identity, 96% coverage: 3:296/305 of query aligns to 3:294/301 of 6rj5A

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E

I

I

binding 2-methyl-~{N}-[(1~{R})-1-[4-(methylsulfonylcarbamoyl)phenyl]ethyl]-5-phenyl-pyrazole-3-carboxamide: L146 (≠ I149), Y169 (= Y171), D170 (≠ N172), P171 (≠ D173), I173 (≠ C175), H201 (= H203), T202 (≠ I204), P203 (= P205), L211 (≠ V213)

6plfA Crystal structure of human phgdh complexed with compound 1 (see paper)
44% identity, 96% coverage: 3:296/305 of query aligns to 4:295/305 of 6plfA

query
sites
6plfA

R

K

I

V

L

L

A

I

N

S

D

D

G

S

M

L

N

D

K

P

N

C

A

C

V

R

N

K

G

I

L

L

I

Q

D

D

L

G

G

G

Y

L

E

Q

V

V

E

E

-

K

D

Q

H

N

Y

L

D

S

K

K

D

E

E

E

L

L

L

I

V

A

K

E

I

L

K

Q

E

D

F

C

D

E

V

G

L

L

V

I

V

V

R

R

S

S

A

A

T

T

K

K

V

V

T

T

K

A

E

D

V

V

I

I

D

N

A

A

T

E

V

-

K

-

G

-

A

-

K

K

L

L

K

Q

L

V

I

V

I

G

R

R

A

A

G

G

V

T

G

G

V

V

D

D

N

N

I

V

D

D

V

L

T

E

Y

A

A

A

R

T

D

R

K

K

G

G

L

I

T

L

V

V

N

M

N

N

T

T

P

P

N

N

A

G

S

N

S

S

A

L

S

S

V

A

A

A

E

E

L

L

A

T

I

C

G

G

H

M

M

I

F

M

A

C

V

L

S

A

R

R

F

Q

I

I

N

P

T

Q

A

A

N

T

V

A

T

S

M

M

R

K

Q

D

G

G

K

K

W

W

E

E

K

R

K

K

A

K

Y

F

T

M

G

G

T

T

E

E

I

L

F

N

G

G

K

K

T

T

L

L

G

G

L

I

I

L

G

G

F

L

G

G

R

R

I

I

A

G

R

R

E

E

V

V

A

A

K

T

R

R

A

M

E

Q

A

S

L

F

G

G

M

M

K

K

V

T

I

I

-

G

Y
|
Y

N
x
D

D
x
P

I

I

C

I

G

S

K

P

V

E

V

V

G

S

Y

A

D

S

S

F

Y

G

E

V

F

Q

Y

Q

D

L

D

P

I
x
L

N

E

G

E

L

I

L

W

R

P

E

L

A

C

D

D

F

F

V

I

S

T

L

V

H
|
H

I
x
T

P
|
P

Y

L

D

L

K

P

K

S

K

T

G

T

Y

G

V
x
L

I

L

G

N

D

D

N

N

E

T

F

F

N

A

A

Q

M

C

K

K

D

K

G

G

A

V

F

R

L

V

I

V

N

N

C

C

A

A

R

R

G

G

V

I

V

V

S

D

E

E

Q

G

A

A

L

L

N

R

A

A

I

L

N

Q

N

S

G

G

K

Q

I

C

R

A

G

G

A

A

L

L

D

D

V

V

F

F

E

T

N

E

E

E

P

P

K

P

P

R

C

D

A

R

E

A

I

L

L

V

D

D

N

H

P

E

R

N

V

V

S

I

V

S

T

C

P

P

H

H

I

L

G

G

A

A

S

S

T

T

K

K

E

E

A

A

Q

Q

A

S

R

R

I

C

G

G

E

E

I

I

binding 4-{(1S)-1-[(5-chloro-6-{[(5S)-2-oxo-1,3-oxazolidin-5-yl]methoxy}-1H-indole-2-carbonyl)amino]-2-hydroxyethyl}benzoic acid: Y170 (= Y171), D171 (≠ N172), P172 (≠ D173), L189 (≠ I190), H202 (= H203), T203 (≠ I204), P204 (= P205), L212 (≠ V213)

7ewhA Crystal structure of human phgdh in complex with homoharringtonine (see paper)
44% identity, 96% coverage: 3:296/305 of query aligns to 3:294/302 of 7ewhA

query
sites
7ewhA

R

K

I

V

L

L

A

I

N

S

D

D

G

S

M

L

N

D

K

P

N

C

A

C

V

R

N

K

G

I

L

L

I

Q

D

D

L

G

G

G

Y

L

E

Q

V

V

E

E

-

K

D

Q

H

N

Y

L

D

S

K

K

D

E

E

E

L

L

L

I

V

A

K

E

I

L

K

Q

E

D

F

C

D

E

V

G

L

L

V

I

V

V

R

R

S

S

A

A

T

T

K

K

V

V

T

T

K

A

E

D

V

V

I

I

D

N

A

A

T

E

V

-

K

-

G

-

A

-

K

K

L

L

K

Q

L

V

I

V

I

G

R

R

A

A

G

G

V

T

G

G

V

V

D

D

N

N

I

V

D

D

V

L

T

E

Y

A

A

A

R

T

D

R

K

K

G

G

L

I

T

L

V

V

N

M

N

N

T

T

P

P

N

N

A

G

S

N

S

S

A

L

S

S

V

A

A

A

E

E

L

L

A

T

I

C

G

G

H

M

M

I

F

M

A

C

V

L

S

A

R

R

F

Q

I

I

N

P

T

Q

A

A

N

T

V

A

T

S

M

M

R

K

Q

D

G

G

K

K

W

W

E

E

K

R

K

K

A

K

Y

F

T

M

G

G

T

T

E

E

I

L

F

N

G

G

K

K

T

T

L

L

G

G

L

I

I
x
L

G
|
G

F
x
L

G
|
G

R
|
R

I
|
I

A
x
G

R

R

E

E

V

V

A

A

K

T

R

R

A

M

E

Q

A

S

L

F

G

G

M

M

K

K

V

T

I

I

-

G

Y

Y

N
x
D

D

P

I

I

C

I

G

S

K

P

V

E

V

V

G

S

Y

A

D

S

S

F

Y

G

E

V

F

Q

Y

Q

D

L

D

P

I

L

N

E

G

E

L

I

L

W

R

P

E

L

A

C

D

D

F

F

V

I

S

T

L

V

H
|
H

I
x
T

P
|
P

Y

L

D

L

K

P

K

S

K

T

G

T

Y

G

V

L

I

L

G

N

D

D

N

N

E

T

F

F

N

A

A

Q

M

C

K

K

D

K

G

G

A

V

F

R

L

V

I

V

N

N

C

C

A

A

R

R

G

G

V

I

V

V

S

D

E

E

Q

G

A

A

L

L

N

R

A

A

I

L

N

Q

N

S

G

G

K

Q

I

C

R

A

G

G

A

A

L

L

D

D

V

V

F

F

E

T

N

E

E

E

P

P

K

P

P

R

C

D

A

R

E

A

I

L

L

V

D

D

N

H

P

E

R

N

V

V

S

I

V

S

T

C

P

P

H

H

I

L

G

G

A

A

S

S

T

T

K

K

E

E

A

A

Q

Q

A

S

R

R

I

C

G

G

E

E

I

I

binding (3beta)-O~3~-[(2R)-2,6-dihydroxy-2-(2-methoxy-2-oxoethyl)-6-methylheptanoyl]cephalotaxine: L146 (≠ I149), G147 (= G150), L148 (≠ F151), G149 (= G152), R150 (= R153), I151 (= I154), G152 (≠ A155), D170 (≠ N172), H201 (= H203), T202 (≠ I204), P203 (= P205)

6rihA Crystal structure of phgdh in complex with compound 9 (see paper)
44% identity, 96% coverage: 3:296/305 of query aligns to 3:294/302 of 6rihA

query
sites
6rihA

R

K

I

V

L

L

A

I

N

S

D

D

G

S

M

L

N

D

K

P

N

C

A

C

V

R

N

K

G

I

L

L

I

Q

D

D

L

G

G

G

Y

L

E

Q

V

V

E

E

-

K

D

Q

H

N

Y

L

D

S

K

K

D

E

E

E

L

L

L

I

V

A

K

E

I

L

K

Q

E

D

F

C

D

E

V

G

L

L

V

I

V

V

R

R

S

S

A

A

T

T

K

K

V

V

T

T

K

A

E

D

V

V

I

I

D

N

A

A

T

E

V

-

K

-

G

-

A

-

K

K

L

L

K

Q

L

V

I

V

I

G

R

R

A

A

G

G

V

T

G

G

V

V

D

D

N

N

I

V

D

D

V

L

T

E

Y

A

A

A

R

T

D

R

K

K

G

G

L

I

T

L

V

V

N

M

N

N

T

T

P

P

N

N

A

G

S

N

S

S

A

L

S

S

V

A

A

A

E

E

L

L

A

T

I

C

G

G

H

M

M

I

F

M

A

C

V

L

S

A

R

R

F

Q

I

I

N

P

T

Q

A

A

N

T

V

A

T

S

M

M

R

K

Q

D

G

G

K

K

W

W

E

E

K

R

K

K

A

K

Y

F

T

M

G

G

T

T

E

E

I

L

F

N

G

G

K

K

T

T

L

L

G

G

L

I

I

L

G

G

F

L

G
|
G

R

R

I

I

A

G

R

R

E

E

V

V

A

A

K

T

R

R

A

M

E

Q

A

S

L

F

G

G

M

M

K

K

V

T

I

I

-

G

Y
|
Y

N
x
D

D
x
P

I
|
I

C
x
I

G

S

K

P

V

E

V

V

G

S

Y

A

D

S

S

F

Y

G

E

V

F

Q

Y

Q

D

L

D

P

I

L

N

E

G

E

L

I

L

W

R

P

E

L

A

C

D

D

F

F

V

I

S

T

L

V

H

H

I
x
T

P
|
P

Y

L

D

L

K

P

K

S

K

T

G

T

Y

G

V
x
L

I

L

G

N

D

D

N

N

E

T

F

F

N

A

A

Q

M

C

K

K

D

K

G

G

A

V

F

R

L

V

I

V

N

N

C

C

A

A

R

R

G

G

V

I

V

V

S

D

E

E

Q

G

A

A

L

L

N

R

A

A

I

L

N

Q

N

S

G

G

K

Q

I

C

R

A

G

G

A

A

L

L

D

D

V

V

F

F

E

T

N

E

E

E

P

P

K

P

P

R

C

D

A

R

E

A

I

L

L

V

D

D

N

H

P

E

R

N

V

V

S

I

V

S

T

C

P

P

H

H

I

L

G

G

A

A

S

S

T

T

K

K

E

E

A

A

Q

Q

A

S

R

R

I

C

G

G

E

E

I

I

binding ~{N}-cyclopropyl-2-methyl-5-phenyl-pyrazole-3-carboxamide: G149 (= G152), Y169 (= Y171), D170 (≠ N172), P171 (≠ D173), I172 (= I174), I173 (≠ C175), T202 (≠ I204), P203 (= P205), L211 (≠ V213)

7dkmA Phgdh covalently linked to oridonin (see paper)
44% identity, 96% coverage: 3:296/305 of query aligns to 4:295/306 of 7dkmA

query
sites
7dkmA

R

K

I

V

L

L

A

I

N

S

D

D

G

S

M

L

N

D

K

P

N
x
C

A

C

V

R

N
x
K

G
x
I

L

L

I

Q

D

D

L

G

G

G

Y

L

E

Q

V

V

E

E

-

K

D

Q

H

N

Y

L

D

S

K

K

D

E

E

E

L

L

L

I

V

A

K

E

I

L

K

Q

E

D

F

C

D

E

V

G

L

L

V

I

V

V

R

R

S

S

A

A

T

T

K

K

V

V

T

T

K

A

E

D

V

V

I

I

D

N

A

A

T

E

V

-

K

-

G

-

A

-

K

K

L

L

K

Q

L

V

I

V

I

G

R

R

A

A

G

G

V
x
T

G

G

V

V

D

D

N

N

I

V

D

D

V

L

T

E

Y

A

A

A

R

T

D

R

K

K

G

G

L

I

T

L

V

V

N

M

N

N

T

T

P

P

N

N

A

G

S

N

S

S

A

L

S

S

V
x
A

A

A

E

E

L

L

A

T

I

C

G

G

H

M

M

I

F

M

A

C

V

L

S

A

R

R

F

Q

I

I

N

P

T

Q

A

A

N

T

V

A

T

S

M

M

R

K

Q

D

G

G

K

K

W

W

E

E

K

R

K

K

A

K

Y

F

T

M

G

G

T

T

E

E

I

L

F

N

G

G

K

K

T

T

L

L

G

G

L

I

I

L

G
|
G

F

L

G

G

R
|
R

I
|
I

A

G

R

R

E

E

V

V

A

A

K

T

R

R

A

M

E

Q

A

S

L

F

G

G

M

M

K

K

V

T

I

I

-

G

Y
|
Y

N
x
D

D
x
P

I
|
I

C

I

G

S

K

P

V

E

V

V

G

S

Y

A

D

S

S

F

Y

G

E

V

F

Q

Y

Q

D

L

D

P

I

L

N

E

G

E

L

I

L

W

R

P

E

L

A

C

D

D

F

F

V

I

S

T

L

V

H
|
H

I
x
T

P
|
P

Y

L

D

L

K

P

K

S

K
x
T

G

T

Y

G

V

L

I

L

G

N

D

D

N

N

E

T

F

F

N

A

A

Q

M

C

K

K

D

K

G

G

A

V

F

R

L

V

I

V

N

N

C
|
C

A
|
A

R
|
R

G

G

V

I

V

V

S

D

E

E

Q

G

A

A

L

L

N

R

A

A

I

L

N

Q

N

S

G

G

K

Q

I

C

R

A

G

G

A

A

L

L

D

D

V

V

F

F

E

T

N

E

E

E

P

P

K

P

P

R

C

D

A

R

E

A

I

L

L

V

D

D

N

H

P

E

R

N

V

V

S

I

V

S

T

C

P

P

H
|
H

I

L

G
|
G

A

A

S

S

T

T

K

K

E

E

A

A

Q

Q

A

S

R

R

I

C

G

G

E
|
E

E

E

I

I

binding nicotinamide-adenine-dinucleotide: T74 (≠ V76), A102 (≠ V104), G148 (= G150), R151 (= R153), I152 (= I154), Y170 (= Y171), D171 (≠ N172), P172 (≠ D173), I173 (= I174), H202 (= H203), T203 (≠ I204), P204 (= P205), T209 (≠ K210), C230 (= C231), A231 (= A232), R232 (= R233), H279 (= H280), G281 (= G282)
binding (1beta,6beta,7beta,8alpha,9beta,10alpha,13alpha,14R,16beta)-1,6,7,14-tetrahydroxy-7,20-epoxykauran-15-one: C14 (≠ N13), K17 (≠ N16), I18 (≠ G17), E293 (= E294)

6plgA Crystal structure of human phgdh complexed with compound 15 (see paper)
44% identity, 96% coverage: 3:296/305 of query aligns to 3:294/303 of 6plgA

query
sites
6plgA

R

K

I

V

L

L

A

I

N

S

D

D

G

S

M

L

N

D

K

P

N

C

A

C

V

R

N

K

G

I

L

L

I

Q

D

D

L

G

G

G

Y

L

E

Q

V

V

E

E

-

K

D

Q

H

N

Y

L

D

S

K

K

D

E

E

E

L

L

L

I

V

A

K

E

I

L

K

Q

E

D

F

C

D

E

V

G

L

L

V

I

V

V

R

R

S

S

A

A

T

T

K

K

V

V

T

T

K

A

E

D

V

V

I

I

D

N

A

A

T

E

V

-

K

-

G

-

A

-

K

K

L

L

K

Q

L

V

I

V

I

G

R

R

A

A

G

G

V

T

G

G

V

V

D

D

N

N

I

V

D

D

V

L

T

E

Y

A

A

A

R

T

D

R

K

K

G

G

L

I

T

L

V

V

N

M

N

N

T

T

P

P

N

N

A

G

S

N

S

S

A

L

S

S

V

A

A

A

E

E

L

L

A

T

I

C

G

G

H

M

M

I

F

M

A

C

V

L

S

A

R

R

F

Q

I

I

N

P

T

Q

A

A

N

T

V

A

T

S

M

M

R

K

Q

D

G

G

K

K

W

W

E

E

K

R

K

K

A

K

Y

F

T

M

G

G

T

T

E

E

I

L

F

N

G

G

K

K

T

T

L

L

G

G

L

I

I

L

G

G

F

L

G
|
G

R
|
R

I

I

A

G

R

R

E

E

V

V

A

A

K

T

R

R

A

M

E

Q

A

S

L

F

G

G

M

M

K

K

V

T

I

I

-

G

Y

Y

N
x
D

D
x
P

I
|
I

C
x
I

G

S

K

P

V

E

V

V

G

S

Y

A

D

S

S

F

Y

G

E

V

F

Q

Y

Q

D

L

D

P

I

L

N

E

G

E

L

I

L

W

R

P

E

L

A

C

D

D

F

F

V

I

S

T

L

V

H
|
H

I
x
T

P

P

Y

L

D
x
L

K

P

K

S

K

T

G

T

Y

G

V

L

I

L

G

N

D

D

N

N

E

T

F

F

N

A

A

Q

M

C

K

K

D

K

G

G

A

V

F

R

L

V

I

V

N

N

C

C

A

A

R

R

G

G

V

I

V

V

S

D

E

E

Q

G

A

A

L

L

N

R

A

A

I

L

N

Q

N

S

G

G

K

Q

I

C

R

A

G

G

A

A

L

L

D

D

V

V

F

F

E

T

N

E

E

E

P

P

K

P

P

R

C

D

A

R

E

A

I

L

L

V

D

D

N

H

P

E

R

N

V

V

S

I

V

S

T

C

P

P

H

H

I

L

G

G

A

A

S

S

T

T

K

K

E

E

A

A

Q

Q

A

S

R

R

I

C

G

G

E

E

I

I

binding (2S)-(4-{3-[(4,5-dichloro-1-methyl-1H-indole-2-carbonyl)amino]oxetan-3-yl}phenyl)(pyridin-3-yl)acetic acid: G149 (= G152), R150 (= R153), D170 (≠ N172), P171 (≠ D173), I172 (= I174), I173 (≠ C175), H201 (= H203), T202 (≠ I204), L205 (≠ D207)

6rj2A Crystal structure of phgdh in complex with compound 40 (see paper)
44% identity, 96% coverage: 4:296/305 of query aligns to 1:291/299 of 6rj2A

query
sites
6rj2A

I

V

L

L

A

I

N

S

D

D

G

S

M

L

N

D

K

P

N

C

A

C

V

R

N

K

G

I

L

L

I

Q

D

D

L

G

G

G

Y

L

E

Q

V

V

E

E

-

K

D

Q

H

N

Y

L

D

S

K

K

D

E

E

E

L

L

L

I

V

A

K

E

I

L

K

Q

E

D

F

C

D

E

V

G

L

L

V

I

V

V

R

R

S

S

A

A

T

T

K

K

V

V

T

T

K

A

E

D

V

V

I

I

D

N

A

A

T

E

V

-

K

-

G

-

A

-

K

K

L

L

K

Q

L

V

I

V

I

G

R

R

A

A

G

G

V

T

G

G

V

V

D

D

N

N

I

V

D

D

V

L

T

E

Y

A

A

A

R

T

D

R

K

K

G

G

L

I

T

L

V

V

N

M

N

N

T

T

P

P

N

N

A

G

S

N

S

S

A

L

S

S

V

A

A

A

E

E

L

L

A

T

I

C

G

G

H

M

M

I

F

M

A

C

V

L

S

A

R

R

F

Q

I

I

N

P

T

Q

A

A

N

T

V

A

T

S

M

M

R

K

Q

D

G

G

K

K

W

W

E

E

K

R

K

K

A

K

Y

F

T

M

G

G

T

T

E

E

I

L

F

N

G

G

K

K

T

T

L

L

G

G

L

I

I

L

G

G

F

L

G
|
G

R

R

I
|
I

A

G

R

R

E

E

V

V

A

A

K

T

R

R

A

M

E

Q

A

S

L

F

G

G

M

M

K

K

V

T

I

I

-

G

Y
|
Y

N
x
D

D
x
P

I
|
I

C
x
I

G

S

K

P

V

E

V

V

G

S

Y

A

D

S

S

F

Y

G

E

V

F

Q

Y

Q

D

L

D

P

I

L

N

E

G

E

L

I

L

W

R

P

E

L

A

C

D

D

F

F

V

I

S

T

L

V

H
|
H

I
x
T

P

P

Y

L

D

L

K

P

K

S

K

T

G

T

Y

G

V
x
L

I

L

G

N

D

D

N

N

E

T

F

F

N

A

A

Q

M

C

K

K

D

K

G

G

A

V

F

R

L

V

I

V

N

N

C

C

A

A

R
|
R

G

G

V

I

V

V

S

D

E

E

Q

G

A

A

L

L

N

R

A

A

I

L

N

Q

N

S

G

G

K

Q

I

C

R

A

G

G

A

A

L

L

D

D

V

V

F

F

E

T

N

E

E

E

P

P

K

P

P

R

C

D

A

R

E

A

I

L

L

V

D

D

N

H

P

E

R

N

V

V

S

I

V

S

T

C

P

P

H

H

I

L

G

G

A

A

S

S

T

T

K

K

E

E

A

A

Q

Q

A

S

R

R

I

C

G

G

E

E

I

I

binding ~{N}-[(1~{R})-1-[4-(ethanoylsulfamoyl)phenyl]ethyl]-2-methyl-5-phenyl-pyrazole-3-carboxamide: G146 (= G152), I148 (= I154), Y166 (= Y171), D167 (≠ N172), P168 (≠ D173), I169 (= I174), I170 (≠ C175), H198 (= H203), T199 (≠ I204), L208 (≠ V213), R228 (= R233)

6plfB Crystal structure of human phgdh complexed with compound 1 (see paper)
42% identity, 96% coverage: 3:296/305 of query aligns to 2:285/292 of 6plfB

query
sites
6plfB

R

K

I

V

L

L

A

I

N

S

D

D

G

S

M

L

N

D

K

P

N

C

A

C

V

R

N

K

G

I

L

L

I

Q

D

D

L

G

G

G

Y

L

E

Q

V

V

E

E

D

K

H

-

Y

-

D

-

K

Q

D

N

E

L

L

L

L

I

V

A

K

E

I

L

K

Q

E

D

F

C

D

E

V

G

L

L

V

I

V

V

R

R

S

S

A

A

T

A

K

-

V

-

T

-

K

-

E

D

V

V

I

I

D

N

A

A

T

E

V

-

K

-

G

-

A

-

K

K

L

L

K

Q

L

V

I

V

I

G

R

R

A

A

G

G

V

T

G

G

V

V

D

D

N

N

I

V

D

D

V

L

T

E

Y

A

A

A

R

T

D

R

K

K

G

G

L

I

T

L

V

V

N

M

N

N

T

T

P

P

N

N

A

G

S

N

S

S

A

L

S

S

V

A

A

A

E

E

L

L

A

T

I

C

G

G

H

M

M

I

F

M

A

C

V

L

S

A

R

R

F

Q

I

I

N

P

T

Q

A

A

N

T

V

A

T

S

M

M

R

K

Q

D

G

G

K

K

W

W

E

E

K

R

K

K

A

K

Y

F

T

M

G

G

T

T

E

E

I

L

F

N

G

G

K

K

T

T

L

L

G

G

L

I

I

L

G

G

F

L

G

G

R
|
R

I

I

A

G

R

R

E

E

V

V

A

A

K

T

R

R

A

M

E

Q

A

S

L

F

G

G

M

M

K

K

V

T

I

I

-

G

Y
|
Y

N
x
D

D
x
P

I

I

C
x
I

G

S

K

P

V

E

V

V

G

S

Y

A

D

S

S

F

Y

G

E

V

F

Q

Y

Q

D

L

D

P

I
x
L

N

E

G

E

L

I

L

W

R

P

E

L

A

C

D

D

F

F

V

I

S

T

L

V

H

H

I
x
T

P
|
P

Y

L

D

L

K

P

K
x
S

K

T

G

T

Y

G

V
x
L

I

L

G

N

D

D

N

N

E

T

F

F

N

A

A

Q

M

C

K

K

D

K

G

G

A

V

F

R

L

V

I

V

N

N

C

C

A

A

R

R

G

G

V

I

V

V

S

D

E

E

Q

G

A

A

L

L

N

R

A

A

I

L

N

Q

N

S

G

G

K

Q

I

C

R

A

G

G

A

A

L

L

D

D

V

V

F

F

E

T

N

E

E

E

P

P

K

P

P

R

C

D

A

R

E

A

I

L

L

V

D

D

N

H

P

E

R

N

V

V

S

I

V

S

T

C

P

P

H

H

I

L

G

G

A

A

S

S

T

T

K

K

E

E

A

A

Q

Q

A

S

R

R

I

C

G

G

E

E

I

I

binding 4-{(1S)-1-[(5-chloro-6-{[(5S)-2-oxo-1,3-oxazolidin-5-yl]methoxy}-1H-indole-2-carbonyl)amino]-2-hydroxyethyl}benzoic acid: R141 (= R153), Y160 (= Y171), D161 (≠ N172), P162 (≠ D173), I164 (≠ C175), L179 (≠ I190), T193 (≠ I204), P194 (= P205), S198 (≠ K209), L202 (≠ V213)

1wwkA Crystal structure of phosphoglycerate dehydrogenase from pyrococcus horikoshii ot3
45% identity, 100% coverage: 2:305/305 of query aligns to 1:303/304 of 1wwkA

query
sites
1wwkA

I

M

R

K

I

V

L

L

A

V

N

A

D

A

G

P

M

L

N

H

K

E

N

K

A

A

V

I

N

Q

G

V

L

L

I

K

D

D

L

A

G

G

Y

L

E

E

V

V

V

I

-

Y

E

E

D

E

H

Y

Y

P

D

D

K

E

D

D

E

R

L

L

L

V

V

E

K

L

I

V

K

K

E

D

F

V

D

E

V

A

L

I

V

I

V

V

R

R

S

S

A

K

T

P

K

K

V

V

T

T

K

R

E

R

V

V

I

I

D

E

A

S

A

A

T

P

V

-

K

-

G

-

A

-

K

K

L

L

K

K

L

V

I

I

I

A

R

R

A

A

G

G

V

V

G

G

V

L

D

D

N

N

I

I

D

D

V

V

T

E

Y

A

A

A

R

K

D

E

K

K

G

G

L

I

T

E

V

V

N

V

N

N

T

A

P

P

N

A

A

A

S
|
S

S

S

A

R

S

S

V
|
V

A

A

E

E

L

L

A

A

I

V

G

G

H

L

M

M

F

F

A

S

V

V

S

A

R

R

F

K

I

I

N

A

T

F

A

A

N

D

V

R

T

K

M

M

R

R

Q

E

G

G

K

V

W

W

E

A

K

K

A

E

Y

A

T

M

G

G

T

I

E

E

I

L

F

E

G

G

K

K

T

T

L

I

G

G

L

I

I

I

G
|
G

F
|
F

G
|
G

R
|
R

I
|
I

A

G

R

Y

E

Q

V

V

A

A

K

K

R

I

A

A

E

N

A

A

L

L

G

G

M

M

K

N

V

I

I

L

Y

L

N
x
Y

D
|
D

I

-

C

-

G

-

K

-

V

-

G
x
P

Y

Y

D

P

S

N

Y

E

E

E

F

R

Y

A

D

K

D

E

I

V

N

N

G

G

-

K

-

F

-

V

-

D

-

L

-

E

-

T

L

L

R

K

E

E

A

S

D

D

F

V

V

V

S

T

L

I

H

H

I
x
V

P
|
P

Y

L

D

V

K

E

K

S

K
x
T

G

Y

Y

H

V

L

I

I

G

N

D

E

N

E

E

R

F

L

N

K

A

L

M

M

K

K

D

K

G

T

A

A

F

I

L

L

I

I

N

N

C
x
T

A
x
S

R
|
R

G

G

G

P

V

V

S

D

E

T

Q

N

A

A

L

L

L

V

N

K

A

A

I

L

N

K

N

E

G

G

K

W

I

I

R

A

G

G

A

A

A

G

L

L

D
|
D

V

V

F

F

E

E

N

E

E
|
E

P

P

K

L

P

P

C

K

A

D

E

H

I

P

L

L

-

T

-

K

-

F

D

D

N

N

P

-

R

-

V

V

S

V

V

L

T

T

P

P

H
|
H

I

I

G
|
G

A

A

S

S

T

T

K

V

E

E

A

A

Q

Q

A

E

R

R

I

A

G

G

E

V

E

E

I

V

V

A

N

E

I

K

V

V

E

V

N

K

T

I

F

L

K

K

active site: S96 (= S100), R230 (= R233), D254 (= D257), E259 (= E262), H278 (= H280)
binding nicotinamide-adenine-dinucleotide: V100 (= V104), G146 (= G150), F147 (= F151), G148 (= G152), R149 (= R153), I150 (= I154), Y168 (≠ N172), D169 (= D173), P170 (≠ G180), V201 (≠ I204), P202 (= P205), T207 (≠ K210), T228 (≠ C231), S229 (≠ A232), D254 (= D257), H278 (= H280), G280 (= G282)

P87228 Putative D-3-phosphoglycerate dehydrogenase; 3-PGDH; 2-oxoglutarate reductase; EC 1.1.1.95; EC 1.1.1.399 from Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast) (see paper)
37% identity, 97% coverage: 2:296/305 of query aligns to 56:360/466 of P87228

query
sites
P87228

I

I

R

K

I

I

L

L

A

L

N

L

D

E

G

N

M

V

N

N

K

Q

N

S

A

A

V

L

N

S

G

N

L

L

I

K

D

D

L

E

G

G

Y

Y

E

Q

V

V

-

E

-

F

V

L

E

K

D

T

H

S

Y

M

D
x
S

K

E

D

D

E

D

L

L

L

V

V

E

K

K

I

I

K

K

E

G

F

V

D

H

V

A

L

I

V

G

V

I

R

R

S

S

A

K

T

T

K

R

V

L

T

T

K

R

E

R

V

V

I

L

D

E

A

A

T

D

V

-

K

-

G

-

A

-

K

S

L

L

K

I

L

V

I

I

I

G

R

C

A

F

G

C

V

I

G

G

V

T

D

N

N

Q

I

V

D

D

V

L

T

D

Y

F

A

A

R

A

D

E

K

R

G

G

L

I

T

A

V

V

N

F

N

N

T

S

P

P

N

Y

A

A

S

N

S

S

A

R

S

S

V

V

A

A

E

E

L

L

A

V

I

I

G

G

H

Y

M

I

F

I

A

S

V

L

S

A

R

R

F

Q

I

V

N

G

T

D

A

R

N

S

V

L

T

E

M

L

R

H

Q

R

G

G

K

E

W

W

E

N

K

K

K

V

A

S

Y

S

T

G

G

C

T

W

E

E

I

I

F

R

G

G

K

K

T

T

L

L

G

G

L

I

I

I

G

G

F

Y

G

G

R

H

I

I

A

G

R

S

E

Q

V

L

A

S

K

V

R

L

A

A

E

E

A

A

L

M

G

G

M

L

K

H

V

V

I

V

Y

Y

N

Y

D

D

I

I

C

L

G

-

K

P

V

I

V

M

G

P

Y

L

D

G

S

S

Y

A

E

K

F

Q

Y

L

D

S

I

L

N

P

G

E

L

L

R

H

E

R

A

A

D

D

F

F

V

V

S

S

L

L

H

H

I

V

P

P

Y

A

D
x
S

K

P

K

E

K

T

G

K

Y

N

V

M

I

I

G

S

D

S

N

K

E

E

F

F

N

A

A

A

M

M

K

K

D

E

G

G

A

S

F

Y

L

L

I

I

N

N

C

A

A

S

R

R

G

G

G

T

V

V

S

D

E

I

Q

P

A

A

L

L

L

V

N

D

A

A

I

S

N

K

N

S

G

G

K

K

I

I

R

A

G

G

A

A

L

I

D

D

V

V

F

Y

E

P

N

S

E

E

P

P

-

A

-

G

-

N

-

G

-

K

-

D

-

K

-

F

-

V

-

D

-

S

-

L

-

N

K

S

P

W

C

T

A

S

E

E

I

L

L

T

D

H

N

C

P

K

R

N

V

I

S

I

V

L

T

T

P

P

H

H

I

I

G

G

A

G

S

S

T

T

K

E

E

E

A

A

Q

Q

A

Y

R

N

I

I

G

G

E

I

E

E

I

V

S87 (≠ D31) modified: Phosphoserine
S258 (≠ D207) modified: Phosphoserine

3dc2A Crystal structure of serine bound d-3-phosphoglycerate dehydrogenase from mycobacterium tuberculosis (see paper)
41% identity, 90% coverage: 28:300/305 of query aligns to 28:297/526 of 3dc2A

query
sites
3dc2A

D

D

H

G

Y

P

D

D

K

R

D

D

E

K

L

L

V

A

K

A

I

V

K

P

E

E

F

A

D

D

V

A

L

L

V

L

V

V

R

R

S

S

A

A

T

T

K

T

V

V

T

D

K

A

E

E

V

V

I

L

D

A

A

A

T

P

V

-

K

-

G

-

A

-

K

K

L

L

K

K

L

I

I

V

I

A

R

R

A

A

G

G

V

V

G

G

V

L

D

D

N

N

I

V

D

D

V

V

T

D

Y

A

A

A

R

T

D

A

K

R

G

G

L

V

T

L

V

V

N

V

N

N

T

A

P

P

N

T

A

S

S
x
N

S

I

A

H

S

S

V

A

A

A

E

E

L

H

A

A

I

L

G

A

H

L

M

L

F

L

A

A

V

A

S

S

R

R

F

Q

I

I

N

P

T

A

A

A

N

D

V

A

T

S

M

L

R

R

Q

E

G

H

K

T

W

W

E

K

K

R

K

S

A

S

Y

F

T

S

G

G

T

T

E

E

I

I

F

F

G

G

K

K

T

T

L

V

G

G

L

V

I

V

G

G

F

L

G

G

R

R

I

I

A

G

R

Q

E

L

V

V

A

A

K

Q

R

R

A

I

E

A

A

A

L

F

G

G

M

-

K

-

V

-

I

-

Y

-

N

-

D

-

I

-

C

-

G

A

K

Y

V

V

G

A

Y

Y

D

D

S

P

Y

Y

-

V

-

S

-

P

-

A

-

R

-

A

-

Q

-

L

-

G

-

I

E

E

F

L

Y

L

D

-

D

S

I

L

N

D

G

D

L

L

R

A

E

R

A

A

D

D

F

F

V

I

S

S

L

V

H

H

I

L

P

P

Y

K

D

T

K

P

K

E

K

T

G

A

Y

G

V

L

I

I

G

D

D

K

N

E

E

A

F

L

N

A

A

K

M

T

K

K

D

P

G

G

A

V

F

I

L

I

I

V

N

N

C

A

A

A

R
|
R

G

G

V

L

V

V

S

D

E

E

Q

A

A

A

L

L

L

A

N

D

A

A

I

I

N

T

N

G

G

G

K

H

I

V

R

R

G

A

A

A

A

G

L

L

D
|
D

V

V

F

F

E

A

N

T

E
|
E

P

P

K

C

P

T

C

D

A

S

E

P

I

L

L

F

D

E

N

L

P

A

R

Q

V

V

S

V

V

V

T

T

P

P

H
|
H

I

L

G

G

A

A

S

S

T

T

K

A

E

E

A

A

Q

Q

A

D

R

R

I

A

G

G

E

T

E

D

I

V

V

A

N

E

I

S

V

V

active site: N96 (≠ S100), R230 (= R233), D254 (= D257), E259 (= E262), H277 (= H280)

Sites not aligning to the query:

binding serine: 458, 460, 461, 462, 463, 464, 465, 484

3ddnB Crystal structure of hydroxypyruvic acid phosphate bound d-3- phosphoglycerate dehydrogenase in mycobacterium tuberculosis (see paper)
41% identity, 90% coverage: 28:300/305 of query aligns to 29:298/525 of 3ddnB

query
sites
3ddnB

D

D

H

G

Y

P

D

D

K

R

D

D

E

K

L

L

V

A

K

A

I

V

K

P

E

E

F

A

D

D

V

A

L

L

V

L

V

V

R

R

S

S

A

A

T

T

K

T

V

V

T

D

K

A

E

E

V

V

I

L

D

A

A

A

T

P

V

-

K

-

G

-

A

-

K

K

L

L

K

K

L

I

I

V

I

A

R
|
R

A

A

G

G

V
|
V

G

G

V

L

D

D

N

N

I

V

D

D

V

V

T

D

Y

A

A

A

R

T

D

A

K

R

G

G

L

V

T

L

V

V

N

V

N

N

T

A

P

P

N

T

A

S

S
x
N

S

I

A

H

S

S

V

A

A

A

E

E

L

H

A

A

I

L

G

A

H

L

M

L

F

L

A

A

V

A

S

S

R

R

F

Q

I

I

N

P

T

A

A

A

N

D

V

A

T

S

M

L

R

R

Q

E

G

H

K

T

W

W

E

K

K

R

K

S

A

S

Y

F

T

S

G

G

T

T

E

E

I

I

F

F

G

G

K

K

T

T

L

V

G

G

L

V

I

V

G

G

F

L

G

G

R

R

I

I

A

G

R

Q

E

L

V

V

A

A

K

Q

R

R

A

I

E

A

A

A

L

F

G

G

M

-

K

-

V

-

I

-

Y

-

N

-

D

-

I

-

C

-

G

A

K

Y

V

V

G

A

Y

Y

D

D

S

P

Y

Y

-

V

-

S

-

P

-

A

-

R

-

A

-

Q

-

L

-

G

-

I

E

E

F

L

Y

L

D

-

D

S

I

L

N

D

G

D

L

L

R

A

E

R

A

A

D

D

F

F

V

I

S

S

L

V

H

H

I

L

P

P

Y

K

D

T

K

P

K

E

K

T

G

A

Y

G

V

L

I

I

G

D

D

K

N

E

E

A

F

L

N

A

A

K

M

T

K

K

D

P

G

G

A

V

F

I

L

I

I

V

N

N

C

A

A

A

R
|
R

G

G

V

L

V

V

S

D

E

E

Q

A

A

A

L

L

L

A

N

D

A

A

I

I

N

T

N

G

G

G

K

H

I

V

R

R

G

A

A

A

A

G

L

L

D
|
D

V

V

F

F

E

A

N

T

E
|
E

P

P

K

C

P

T

C

D

A

S

E

P

I

L

L

F

D

E

N

L

P

A

R

Q

V

V

S

V

V

V

T

T

P

P

H
|
H

I

L

G

G

A
|
A

S

S

T

T

K

A

E

E

A

A

Q
|
Q

A

D

R

R

I

A

G

G

E

T

E

D

I

V

V

A

N

E

I

S

V

V

active site: N97 (≠ S100), R231 (= R233), D255 (= D257), E260 (= E262), H278 (= H280)
binding 2-oxo-3-(phosphonooxy)propanoic acid: R70 (= R73), V73 (= V76), N97 (≠ S100), A281 (= A283), Q287 (= Q289)

2eklA Structure of st1218 protein from sulfolobus tokodaii
39% identity, 100% coverage: 2:305/305 of query aligns to 5:307/312 of 2eklA

query
sites
2eklA

I

V

R

K

I

A

L

L

A

I

N

T

D

D

G

P

M

I

N

D

K

E

N

I

A

L

V

I

N

K

G

T

L

L

I

R

D

E

L

K

G

G

Y

I

E

Q

V

V

-

D

V

Y

E

M

D

P

H

E

Y

I

D

S

K

K

D

E

E

E

L

L

V

N

K

I

I

I

K

G

E

N

F

Y

D

D

V

I

L

I

V

V

R

R

S

S

A

R

T

T

K

K

V

V

T

T

K

K

E

D

V

V

I

I

D

E

A

-

T

-

V

-

K

K

G

G

A

K

K

K

L

L

K

K

L

I

I

I

I

A

R

R

A

A

G

G

V
x
I

G

G

V

L

D

D

N

N

I

I

D

D

V

T

T

E

Y

E

A

A

R

E

D

K

K

R

G

N

L

I

T

K

V

V

N

V

N

Y

T

A

P

P

N

G

A

A

S
|
S

S

T

A

D

S

S

V

A

A

V

E

E

L

L

A

T

I

I

G

G

H

L

M

M

F

I

A

A

V

A

S

A

R

R

F

K

I

M

N

Y

T

T

A

S

N

M

V

A

T

L

M

A

R

K

Q

S

G

G

K

I

W

F

E

K

K

K

K

-

A

-

Y

I

T

E

G

G

T

L

E

E

I

L

F

A

G

G

K

K

T

T

L

I

G

G

L

I

I

V

G
|
G

F

F

G
|
G

R
|
R

I
|
I

A

G

R

T

E

K

V

V

A

G

K

I

R

I

A

A

E

N

A

A

L

M

G

G

M

M

K

K

V

V

I

L

Y

A

N
x
Y

D
|
D

I
|
I

C
x
L

G

-

K

-

V

-

G

-

Y

-

D

D

S

I

Y

R

E

E

F

K

Y

A

D

E

D

K

I

I

N

N

G

A

-

K

-

A

-

V

-

S

-

L

-

E

L

L

R

K

E

N

A

S

D

D

F

V

V

I

S

S

L

L

H
|
H

I
x
V

P
x
T

Y

V

D

S

K

K

K

D

K

A

G

K

Y

P

V
x
I

I

I

G

D

D

Y

N

P

E

Q

F

F

N

E

A

L

M

M

K

K

D

D

G

N

A

V

F

I

L

I

I

V

N

N

C
x
T

A
x
S

R
|
R

G

A

G

V

V

A

V

V

S

N

E

G

Q

K

A

A

L

L

N

D

A

Y

I

I

N

K

G

G

K

K

I

V

R

Y

G

A

A

Y

A

A

L

T

D
|
D

V

V

F

F

E

W

N

N

E
|
E

P

P

K

P

P

K

C

E

A

E

-

W

-

E

-

L

E

E

I

L

L

L

D

K

N

H

P

E

R

R

V

V

S

I

V

V

T

T

P

T

H
|
H

I

I

G
|
G

A

A

S

Q

T

T

K

K

E

E

A

A

Q

Q

A

K

R

R

I

V

G

A

E

E

E

M

I

T

V

T

N

Q

I

N

V

L

E

L

N

N

T

A

F

M

K

K

active site: S100 (= S100), R232 (= R233), D256 (= D257), E261 (= E262), H282 (= H280)
binding nicotinamide-adenine-dinucleotide: I76 (≠ V76), S100 (= S100), G148 (= G150), G150 (= G152), R151 (= R153), I152 (= I154), Y170 (≠ N172), D171 (= D173), I172 (= I174), L173 (≠ C175), H202 (= H203), V203 (≠ I204), T204 (≠ P205), I212 (≠ V213), T230 (≠ C231), S231 (≠ A232), D256 (= D257), G284 (= G282)

7cvpA The crystal structure of human phgdh from biortus.
44% identity, 74% coverage: 70:296/305 of query aligns to 25:248/254 of 7cvpA

query
sites
7cvpA

L

L

I

I

I

V

R

R

A

S

G

-

V

V

G

T

V

A

D

D

N

V

I

I

D

V

V

V

T

G

Y

R

A

A

R

-

D

-

K

-

G

G

L

T

T

L

V

V

N

M

N

N

T

T

P

P

N

N

A

G

S

N

S

S

A

L

S

S

V

A

A

A

E

E

L

L

A

T

I

C

G

G

H

M

M

I

F

M

A

C

V

L

S

A

R

R

F

Q

I

I

N

P

T

Q

A

A

N

T

V

A

T

S

M

M

R

K

Q

D

G

G

K

K

W

W

E

E

K

R

K

K

A

K

Y

F

T

M

G

G

T

T

E

E

I

L

F

N

G

G

K

K

T

T

L

L

G

G

L

I

I

L

G
|
G

F

L

G
|
G

R
|
R

I
|
I

A

G

R

R

E

E

V

V

A

A

K

T

R

R

A

M

E

Q

A

S

L

F

G

G

M

M

K

K

V

T

I

I

-

G

Y
|
Y

N
x
D

D
x
P

I
|
I

C

I

G

S

K

P

V

E

V

V

G

S

Y

A

D

S

S

F

Y

G

E

V

F

Q

Y

Q

D

L

D

P

I

L

N

E

G

E

L

I

L

W

R

P

E

L

A

C

D

D

F

F

V

I

S

T

L

V

H
|
H

I
x
T

P
|
P

Y

L

D

L

K

P

K

S

K
x
T

G

T

Y

G

V

L

I

L

G

N

D

D

N

N

E

T

F

F

N

A

A

Q

M

C

K

K

D

K

G

G

A

V

F

R

L

V

I

V

N

N

C
|
C

A
|
A

R
|
R

G

G

V

I

V

V

S

D

E

E

Q

G

A

A

L

L

N

R

A

A

I

L

N

Q

N

S

G

G

K

Q

I

C

R

A

G

G

A

A

L

L

D

D

V

V

F

F

E

T

N

E

E

E

P

P

K

P

P

R

C

D

A

R

E

A

I

L

L

V

D

D

N

H

P

E

R

N

V

V

S

I

V

S

T

C

P

P

H
|
H

I

L

G
|
G

A

A

S

S

T

T

K

K

E

E

A

A

Q

Q

A

S

R

R

I

C

G

G

E

E

I

I

binding nicotinamide-adenine-dinucleotide: G101 (= G150), G103 (= G152), R104 (= R153), I105 (= I154), Y123 (= Y171), D124 (≠ N172), P125 (≠ D173), I126 (= I174), H155 (= H203), T156 (≠ I204), P157 (= P205), T162 (≠ K210), C183 (= C231), A184 (= A232), R185 (= R233), H232 (= H280), G234 (= G282)

5aovA Ternary crystal structure of pyrococcus furiosus glyoxylate hydroxypyruvate reductase in presence of glyoxylate (see paper)
35% identity, 86% coverage: 32:294/305 of query aligns to 36:302/334 of 5aovA

query
sites
5aovA

K

R

D

E

E

K

L

L

V

E

K

K

I

V

K

K

E

D

F

V

D

D

V

A

L

L

V

V

V

T

R
x
M

S
x
L

A

S

T

E

K

R

V

I

T

D

K

Q

E

E

V

V

I

F

D

E

A

N

A

A

T

-

V

-

K

-

G

-

A

P

K

R

L

L

K

R

L

I

I

V

I

A

R

N

A
x
Y

G
x
A

V
|
V

G
|
G

V

Y

D

D

N

N

I

I

D

D

V

V

T

E

Y

E

A

A

R

T

D

R

K

R

G

G

L

I

T

Y

V

V

N

T

N

N

T

T

P

P

N

D

A

V

S
x
L

S

T

A

N

S

A

V
x
T

A

A

E

D

L

H

A

A

I

F

G

A

H

L

M

L

F

L

A

A

V

T

S

A

R

R

F

H

I

V

N

V

T

K

A

G

N

D

V

K

T

F

M

V

R

R

Q

S

G

G

K

E

W

W

E

K

K

R

K

K

A

G

-

I

-

A

-

W

-

H

-

P

-

K

-

W

Y

F

T

L

G

G

T

Y

E

E

I

L

F

Y

G

G

K

K

T

T

L

I

G

G

L

I

I

V

G

G

F
|
F

G
|
G

R
|
R

I
|
I

A

G

R

Q

E

A

V

I

A

A

K

R

R

R

A

A

E

K

A

G

L

F

G

N

M

M

K

R

V

I

I

L

Y

Y

N

Y

D
x
S

I
x
R

C

T

G

R

K

K

V

S

V

Q

G

A

Y

E

D

K

S

E

Y

L

-

G

E

A

F

E

Y

Y

D

R

D

P

I

L

N

E

G

E

L

V

L

L

R

K

E

E

A

S

D

D

F

F

V

V

S

I

L

L

H
x
A

I
x
V

P
|
P

Y

L

D

T

K

K

K

E

K
x
T

G

M

Y

Y

V

M

I

I

G

N

D

E

N

E

E

R

F

L

N

K

A

L

M

M

K

K

D

P

G

T

A

A

F

I

L

L

I

V

N

N

C
x
I

A
|
A

R
|
R

G

G

G

K

V

V

S

D

E

T

Q

K

A

A

L

L

L

I

N

K

A

A

I

L

N

K

N

E

G

G

K

W

I

I

R

A

G

G

A

A

A

G

L

L

D
|
D

V

V

F

F

E

E

N

E

E
|
E

P

P

K

Y

P

Y

C

N

A

E

E

E

I

L

L

F

D

S

N

L

P

D

R

N

V

V

S

V

V

L

T

T

P

P

H
|
H

I

I

G
|
G

A

S

S

A

T

T

K

F

E

E

A

A

Q

R

A

E

R

A

I

M

G

A

E

E

active site: L100 (≠ S100), R241 (= R233), D265 (= D257), E270 (= E262), H288 (= H280)
binding glyoxylic acid: M52 (≠ R48), L53 (≠ S49), L53 (≠ S49), Y74 (≠ A74), A75 (≠ G75), V76 (= V76), G77 (= G77), R241 (= R233), H288 (= H280)
binding nadp nicotinamide-adenine-dinucleotide phosphate: V76 (= V76), T104 (≠ V104), F158 (= F151), G159 (= G152), R160 (= R153), I161 (= I154), S180 (≠ D173), R181 (≠ I174), A211 (≠ H203), V212 (≠ I204), P213 (= P205), T218 (≠ K210), I239 (≠ C231), A240 (= A232), R241 (= R233), H288 (= H280), G290 (= G282)

2p9eA Crystal structure of g336v mutant of e.Coli phosphoglycerate dehydrogenase (see paper)
36% identity, 97% coverage: 2:296/305 of query aligns to 7:304/406 of 2p9eA

query
sites
2p9eA

I

I

R

K

I

F

L

L

A

L

N

V

D

E

G

G

M

V

N

H

K

Q

N

K

A

A

V

L

N

E

G

S

L

L

I

R

D

A

L

A

G

G

Y

Y

E

T

V

N

V

I

E

E

D

F

H

H

-

K

-

G

-

A

Y

L

D

D

K

D

D

E

E

Q

L

L

L

K

V

E

K

S

I

I

K

R

E

D

F

A

D

H

V

F

L

I

V

G

V

L

R

R

S

S

A

R

T

T

K

H

V

L

T

T

K

E

E

D

V

V

I

I

D

N

A

A

T

E

V

-

K

-

G

-

A

-

K

K

L

L

K

V

L

A

I

I

I

G

R

A

A

F

G

A

V

I

G

G

V

T

D

N

N

Q

I

V

D

D

V

L

T

D

Y

A

A

A

R

A

D

K

K

R

G

G

L

I

T

P

V

V

N

F

N

N

T

A

P

P

N

F

A

S

S
x
N

S

T

A

R

S

S

V

V

A

A

E

E

L

L

A

V

I

I

G

G

H

E

M

L

F

L

A

L

V

L

S

L

R

R

F

G

I

V

N

P

T

E

A

A

N

N

V

A

T

K

M

A

R

H

Q

R

G

G

K

V

W

W

E

N

K

K

K

L

A

A

Y

A

T

G

G

S

T

F

E

E

I

A

F

R

G

G

K

K

T

K

L

L

G

G

L

I

I

I

G

G

F

Y

G
|
G

R
x
H

I
|
I

A

G

R

T

E

Q

V

L

A

G

K

I

R

L

A

A

E

E

A

S

L

L

G

G

M

M

K

Y

V

V

I

Y

Y

F

N
x
Y

D
|
D

I
|
I

C

E

G

N

K

K

V

L

V

P

G

L

Y

G

D

N

S

A

Y

T

E

Q

F

V

Y

-

D

Q

D

H

I

L

N

S

G

D

L

L

R

N

E

M

A

S

D

D

F

V

V

V

S

S

L

L

H
|
H

I
x
V

P
|
P

Y

E

D

N

K

P

K
x
S

K

T

G

K

Y

N

V

M

I

M

G

G

D

A

N

K

E

E

F

I

N

S

A

L

M

M

K

K

D

P

G

G

A

S

F

L

L

L

I

I

N

N

C
x
A

A
x
S

R
|
R

G

G

G

T

V

V

S

D

E

I

Q

P

A

A

L

L

L

A

N

D

A

A

I

L

N

A

N

S

G

K

K

H

I

L

R

A

G

G

A

A

L

I

D
|
D

V

V

F

F

E

P

N

T

E
|
E

P

P

K

A

P

T

C

N

A

S

E

D

I

P

L

F

D

T

N

S

P

P

-

L

-

A

-

E

-

F

-

D

R

N

V

V

S

L

V

L

T

T

P

P

H
|
H

I

I

G
|
G

A

G

S

S

T

T

K

Q

E

E

A

A

Q

Q

A

E

R

N

I

I

G

G

E

L

E

E

I

V

active site: N104 (≠ S100), R236 (= R233), D260 (= D257), E265 (= E262), H288 (= H280)
binding 1,4-dihydronicotinamide adenine dinucleotide: G156 (= G152), H157 (≠ R153), I158 (= I154), Y176 (≠ N172), D177 (= D173), I178 (= I174), H206 (= H203), V207 (≠ I204), P208 (= P205), S212 (≠ K209), A234 (≠ C231), S235 (≠ A232), R236 (= R233), H288 (= H280), G290 (= G282)

6rj6A Crystal structure of phgdh in complex with bi-4924 (see paper)
44% identity, 64% coverage: 101:296/305 of query aligns to 3:199/204 of 6rj6A

query
sites
6rj6A

S

S

A

L

S

S

V

A

A

A

E

E

L

L

A

T

I

C

G

G

H

M

M

I

F

M

A

C

V

L

S

A

R

R

F

Q

I

I

N

P

T

Q

A

A

N

T

V

A

T

S

M

M

R

K

Q

D

G

G

K

K

W

W

E

E

K

R

K

K

A

K

Y

F

T

M

G

G

T

T

E

E

I

L

F

N

G

G

K

K

T

T

L

L

G

G

L

I

I

L

G
|
G

F

L

G

G

R
|
R

I
|
I

A

G

R

R

E

E

V

V

A

A

K

T

R

R

A

M

E

Q

A

S

L

F

G

G

M

M

K

K

V

T

I

I

-

G

Y
|
Y

N
x
D

D
x
P

I
|
I

C
x
I

G

S

K

P

V

E

V

V

G

S

Y

A

D

S

S

F

Y

G

E

V

F

Q

Y

Q

D

L

D

P

I

L

N

E

G

E

L

I

L

W

R

P

E

L

A

C

D

D

F

F

V

I

S

T

L

V

H
|
H

I
x
T

P
|
P

Y

L

D

L

K

P

K

S

K
x
T

G

T

Y

G

V

L

I

L

G

N

D

D

N

N

E

T

F

F

N

A

A

Q

M

C

K

K

D

K

G

G

A

V

F

R

L

V

I

V

N

N

C

C

A

A

R

R

G

G

V

I

V

V

S

D

E

E

Q

G

A

A

L

L

N

R

A

A

I

L

N

Q

N

S

G

G

K

Q

I

C

R

A

G

G

A

A

L

L

D

D

V

V

F

F

E

T

N

E

E

E

P

P

K

P

P

R

C

D

A

R

E

A

I

L

L

V

D

D

N

H

P

E

R

N

V

V

S

I

V

S

T

C

P

P

H

H

I

L

G

G

A

A

S

S

T

T

K

K

E

E

A

A

Q

Q

A

S

R

R

I

C

G

G

E

E

I

I

binding 2-[4-[(1~{S})-1-[[4,5-bis(chloranyl)-1,6-dimethyl-indol-2-yl]carbonylamino]-2-oxidanyl-ethyl]phenyl]sulfonylethanoic acid: G52 (= G150), R55 (= R153), I56 (= I154), Y74 (= Y171), D75 (≠ N172), P76 (≠ D173), I77 (= I174), I78 (≠ C175), H106 (= H203), T107 (≠ I204), P108 (= P205), T113 (≠ K210)

Query Sequence

>WP_010963344.1 NCBI__GCF_000008765.1:WP_010963344.1
MIRILANDGMNKNAVNGLIDLGYEVVEDHYDKDELLVKIKEFDVLVVRSATKVTKEVIDA
ATVKGAKLKLIIRAGVGVDNIDVTYARDKGLTVNNTPNASSASVAELAIGHMFAVSRFIN
TANVTMRQGKWEKKAYTGTEIFGKTLGLIGFGRIAREVAKRAEALGMKVIYNDICGKVVG
YDSYEFYDDINGLLREADFVSLHIPYDKKKGYVIGDNEFNAMKDGAFLINCARGGVVSEQ
ALLNAINNGKIRGAALDVFENEPKPCAEILDNPRVSVTPHIGASTKEAQARIGEEIVNIV
ENTFK

Or try a new SitesBLAST search

SitesBLAST's Database

SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory