Comparing WP_011020307.1 NCBI__GCF_000007345.1:WP_011020307.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
1aj8A Citrate synthase from pyrococcus furiosus (see paper)
45% identity, 97% coverage: 4:348/355 of query aligns to 14:353/371 of 1aj8A
P39120 Citrate synthase 2; Citrate synthase II; EC 2.3.3.16 from Bacillus subtilis (strain 168) (see paper)
43% identity, 95% coverage: 11:349/355 of query aligns to 21:355/372 of P39120
1iomA Crystal structure of citrate synthase from thermus thermophilus hb8 (see paper)
42% identity, 99% coverage: 5:355/355 of query aligns to 15:364/374 of 1iomA
6abyA Crystal structure of citrate synthase (msed_1522) from metallosphaera sedula in complex with oxaloacetate (see paper)
41% identity, 97% coverage: 4:349/355 of query aligns to 16:354/372 of 6abyA
6abxA Crystal structure of citrate synthase (msed_1522) from metallosphaera sedula in complex with citrate (see paper)
41% identity, 97% coverage: 4:349/355 of query aligns to 16:354/370 of 6abxA
1ixeA Crystal structure of citrate synthase from thermus thermophilus hb8 (see paper)
41% identity, 99% coverage: 5:355/355 of query aligns to 15:361/371 of 1ixeA
8bp7E Citrate-bound hexamer of synechococcus elongatus citrate synthase (see paper)
41% identity, 97% coverage: 3:347/355 of query aligns to 17:359/379 of 8bp7E
P39119 Citrate synthase 1; Citrate synthase I; EC 2.3.3.16 from Bacillus subtilis (strain 168) (see paper)
38% identity, 97% coverage: 4:349/355 of query aligns to 15:354/366 of P39119
2c6xA Structure of bacillus subtilis citrate synthase
38% identity, 97% coverage: 4:349/355 of query aligns to 14:353/363 of 2c6xA
6s87D Crystal structure of 2-methylcitrate synthase (prpc) from pseudomonas aeruginosa in complex with oxaloacetate.
37% identity, 96% coverage: 10:349/355 of query aligns to 16:349/365 of 6s87D
I6Y9Q3 2-methylcitrate synthase; 2-MCS; MCS; Citrate synthase; EC 2.3.3.5; EC 2.3.3.16 from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
37% identity, 94% coverage: 15:347/355 of query aligns to 52:377/393 of I6Y9Q3
6abwA Crystal structure of citrate synthase (msed_0281) from metallosphaera sedula in complex with acetyl-coa (see paper)
37% identity, 98% coverage: 2:350/355 of query aligns to 7:354/369 of 6abwA
P9WPD5 Citrate synthase 1; EC 2.3.3.16 from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) (see paper)
37% identity, 97% coverage: 4:348/355 of query aligns to 58:414/431 of P9WPD5
2h12B Structure of acetobacter aceti citrate synthase complexed with oxaloacetate and carboxymethyldethia coenzyme a (cmx) (see paper)
34% identity, 98% coverage: 2:348/355 of query aligns to 51:409/426 of 2h12B
O34002 2-methylcitrate synthase; 2-MCS; MCS; Citrate synthase; EC 2.3.3.5; EC 2.3.3.16 from Antarctic bacterium DS2-3R (see 2 papers)
33% identity, 94% coverage: 15:347/355 of query aligns to 30:366/379 of O34002
Sites not aligning to the query:
1a59A Cold-active citrate synthase (see paper)
33% identity, 94% coverage: 15:347/355 of query aligns to 28:364/377 of 1a59A
3msuA Crystal structure of citrate synthase from francisella tularensis
34% identity, 97% coverage: 5:348/355 of query aligns to 64:404/415 of 3msuA
3msuB Crystal structure of citrate synthase from francisella tularensis
33% identity, 97% coverage: 5:348/355 of query aligns to 64:415/426 of 3msuB
4jagA Structural determination of the a50t:s279g:s280k:v281k:k282e:h283n variant of citrate synthase from e. Coli complexed with oxaloacetate (see paper)
33% identity, 97% coverage: 5:348/355 of query aligns to 56:409/426 of 4jagA
4jaeA Structural determination of the a50t:s279g:s280k:v281k:k282e:h283n variant of citrate synthase from e. Coli complexed with s- carboxymethyl-coa (see paper)
33% identity, 97% coverage: 5:348/355 of query aligns to 56:409/426 of 4jaeA
>WP_011020307.1 NCBI__GCF_000007345.1:WP_011020307.1
MSKNICFIDGLEGVLKYREVDINELVKLPYDAVSYLLIRGRLPGEQELAEYSARLHAERR
INKEVIDVIRMCNFNIDAMAALRTVISFISQFDPDLNDSSPEGNMRKAIRLIAIVPTIVA
TYYRMANGKEPLPPDPSLSHGANFLYMIKGSKPDPLDAEVMEKDFILSAEHELNASTFSS
RVTASTMSDLYSAVVSGLCTLKGPLHGGARAEVMTMLDEVASPENAEKFVLEKISQREKI
MGFGHRVYKTYDPRGVIFKQLSKKLAESKGDMHWYTTAEAVENVVVRELVEKRGKPIYPN
VDFYSGVIYKYMEIPPQLATSIFAIGRVSGWIAHCFDQYERKKIIRPRAFMLDEC
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory