Comparing WP_011033020.1 NCBI__GCF_000007065.1:WP_011033020.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 2 hits to proteins with known functional sites (download)
3zyyX Reductive activator for corrinoid,iron-sulfur protein (see paper)
25% identity, 76% coverage: 4:413/539 of query aligns to 206:612/628 of 3zyyX
Sites not aligning to the query:
4c1nI Corrinoid protein reactivation complex with activator (see paper)
25% identity, 76% coverage: 4:413/539 of query aligns to 87:493/509 of 4c1nI
>WP_011033020.1 NCBI__GCF_000007065.1:WP_011033020.1
MKTGVAIDLGTSGFRAQKIDLESGEIKKTVITLRNPLPGANVMDHLDFAIHYGLDKAHGL
SATAVKNILNELGVKPEEMERFAICGNPIQLSIFQGIPIEDLAYAGERKKEKYHIQEQNR
DSRIIPLSEIAGFEEFQNCKLIVPPAIKHEVGADALALIVKAGMIESDEIAIATDYGTNA
EMALKSNGIIYTGSAAAGPALEGQEIEYGSIASPHTICDVEFEGNNLRCYVLDRDMKTAK
GDLINPKTGEVVEKGEVTAKGITGTGVIALIEAGMRNKLIVLPKIQTPEGVLYLQDGIKF
TNNDLIEAGRAIGALRAGHITLCAAAGIEMEDLKIAHMSGAAGTYMDAAKAHQVGMIPYN
ANYVSQIGNTSLTVAREILLSEDRLWELQTIAKQILGTHVMFATSEAFKEAYLLELAYWN
EGMAFKMLQKFLKKKKLPMLSEPSTILKIDRQVERDIPVLGEEGLEVLEKVGTYLTMVIE
DCQGCKKCAKVCPNGALRMEDNGLVKIRTDLCDGANCQRCLHACPDDRFKWENLTVAGI
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory