SitesBLAST
Comparing WP_011034813.1 NCBI__GCF_000007065.1:WP_011034813.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 13 hits to proteins with known functional sites (download)
2fyfA Structure of a putative phosphoserine aminotransferase from mycobacterium tuberculosis (see paper)
22% identity, 98% coverage: 3:364/370 of query aligns to 5:363/368 of 2fyfA
- active site: F101 (= F97), D168 (= D166), K192 (= K190)
- binding tetrachloroplatinate(ii): I321 (≠ L323), A324 (≠ E326)
- binding pyridoxal-5'-phosphate: A77 (≠ D72), T78 (= T73), W81 (≠ F76), F101 (= F97), T147 (= T143), D168 (= D166), T170 (= T168), Q191 (= Q189), K192 (= K190), N243 (≠ E238), T244 (≠ G239)
Sites not aligning to the query:
P9WQ73 Phosphoserine aminotransferase; Phosphohydroxythreonine aminotransferase; PSAT; EC 2.6.1.52 from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) (see 2 papers)
22% identity, 98% coverage: 3:364/370 of query aligns to 12:371/376 of P9WQ73
- T154 (= T143) binding pyridoxal 5'-phosphate
- D176 (= D166) binding pyridoxal 5'-phosphate
- Q199 (= Q189) binding pyridoxal 5'-phosphate
Sites not aligning to the query:
- 1 modified: Initiator methionine, Removed
1bt4A Phosphoserine aminotransferase from bacillus circulans subsp. Alkalophilus
22% identity, 95% coverage: 12:363/370 of query aligns to 7:354/361 of 1bt4A
Q9Y617 Phosphoserine aminotransferase; Phosphohydroxythreonine aminotransferase; PSAT; EC 2.6.1.52 from Homo sapiens (Human) (see 6 papers)
24% identity, 45% coverage: 36:202/370 of query aligns to 43:212/370 of Q9Y617
- S43 (= S36) to R: in PSATD; reduced O-phospho-L-serine:2-oxoglutarate aminotransferase catalytic efficiency; 3-fold increase of KM for 3-phosphohydroxypyruvate; 5-fold increase of KM for L-glutamate; decreased function in L-serine biosynthesis shown through in vitro reconstruction of the phosphorylated pathway; does not affect secondary structure; does not affect dimerization; does not affect thermal stability
- H44 (= H37) binding in other chain
- R45 (= R38) binding in other chain
- Y70 (= Y63) to N: in NLS2; uncertain significance
- G79 (≠ D72) binding pyridoxal 5'-phosphate; to W: in NLS2; loss of O-phospho-L-serine:2-oxoglutarate aminotransferase activity; loss of function in L-serine biosynthesis shown through in vitro reconstruction of the phosphorylated pathway
- C80 (≠ T73) binding pyridoxal 5'-phosphate
- P87 (≠ L80) to A: has no effect on O-phospho-L-serine:2-oxoglutarate aminotransferase catalytic efficiency; does not affect KM for 3-phosphohydroxypyruvate; does not affect KM for L-glutamate; no effect on function in L-serine biosynthesis shown through in vitro reconstruction of the phosphorylated pathway; does not affect secondary structure; does not affect dimerization; does not affect thermal stability; dbSNP:rs11540974
- A99 (≠ V89) to V: in NLS2; does not affect secondary structure; does not affect dimerization; increased thermal stability; dbSNP:rs587777778
- D100 (= D90) to A: in PSATD; has no effect on O-phospho-L-serine:2-oxoglutarate aminotransferase catalytic efficiency; does not affect KM for 3-phosphohydroxypyruvate; does not affect KM for L-glutamate; does not affect secondary structure; results in increased protein aggregation as shown by dynamic light scattering; dbSNP:rs118203967
- W107 (≠ F97) binding pyridoxal 5'-phosphate
- E155 (≠ G142) to Q: in NLS2; uncertain significance
- T156 (= T143) binding pyridoxal 5'-phosphate
- D176 (= D166) binding pyridoxal 5'-phosphate
- S179 (= S169) to L: in NLS2; loss of O-phospho-L-serine:2-oxoglutarate aminotransferase activity; loss of function in L-serine biosynthesis shown through in vitro reconstruction of the phosphorylated pathway; dbSNP:rs587777777
- Q199 (= Q189) binding pyridoxal 5'-phosphate
- K200 (= K190) modified: N6-(pyridoxal phosphate)lysine
Sites not aligning to the query:
- 241 binding in other chain
- 242 binding in other chain
- 245 C → R: in NLS2; reduced O-phospho-L-serine:2-oxoglutarate aminotransferase catalytic efficiency; 9-fold increase of KM for L-glutamate; does not affect KM for 3-phosphohydroxypyruvate; decreased function in L-serine biosynthesis shown through in vitro reconstruction of the phosphorylated pathway; does not affect secondary structure; does not affect dimerization
- 335 binding O-phospho-L-serine
- 336 binding O-phospho-L-serine
- 342 binding O-phospho-L-serine; R → W: in NLS2; loss of O-phospho-L-serine:2-oxoglutarate aminotransferase activity; loss of function in L-serine biosynthesis shown through in vitro reconstruction of the phosphorylated pathway; dbSNP:rs202103028
8a5wC Crystal structure of the human phosphoserine aminotransferase (psat) in complex with o-phosphoserine (see paper)
24% identity, 45% coverage: 36:202/370 of query aligns to 38:207/365 of 8a5wC
Sites not aligning to the query:
8a5wA Crystal structure of the human phosphoserine aminotransferase (psat) in complex with o-phosphoserine (see paper)
24% identity, 45% coverage: 36:202/370 of query aligns to 38:207/365 of 8a5wA
Sites not aligning to the query:
8a5vA Crystal structure of the human phosposerine aminotransferase (psat) (see paper)
24% identity, 45% coverage: 36:202/370 of query aligns to 38:207/365 of 8a5vA
Sites not aligning to the query:
8a5vE Crystal structure of the human phosposerine aminotransferase (psat) (see paper)
24% identity, 45% coverage: 36:202/370 of query aligns to 39:208/366 of 8a5vE
Sites not aligning to the query:
3e77A Human phosphoserine aminotransferase in complex with plp
24% identity, 45% coverage: 36:202/370 of query aligns to 36:205/363 of 3e77A
- active site: W100 (≠ F97), D169 (= D166), K193 (= K190)
- binding pyridoxal-5'-phosphate: G71 (≠ S71), G72 (≠ D72), C73 (≠ T73), W100 (≠ F97), T149 (= T143), D169 (= D166), S171 (≠ T168), Q192 (= Q189), K193 (= K190)
Sites not aligning to the query:
8a5wE Crystal structure of the human phosphoserine aminotransferase (psat) in complex with o-phosphoserine (see paper)
24% identity, 46% coverage: 36:206/370 of query aligns to 39:208/365 of 8a5wE
Sites not aligning to the query:
1w23B Crystal structure of phosphoserine aminotransferase from bacillus alcalophilus (see paper)
20% identity, 83% coverage: 12:318/370 of query aligns to 7:307/357 of 1w23B
- active site: W102 (= W101), D172 (= D166), K196 (= K190)
- binding magnesium ion: Y127 (= Y121), Y154 (≠ S145), H285 (≠ A294), A286 (≠ E295)
- binding pyridoxal-5'-phosphate: A76 (≠ D72), S77 (≠ T73), W102 (= W101), T152 (= T143), D172 (= D166), S174 (≠ T168), Q195 (= Q189), K196 (= K190), N234 (= N243), T235 (= T244)
4azjA Structural basis of l-phosphoserine binding to bacillus alcalophilus phosphoserine aminotransferase (see paper)
20% identity, 83% coverage: 12:318/370 of query aligns to 7:310/360 of 4azjA
- active site: W102 (= W101), D172 (= D166), K196 (= K190)
- binding pyridoxal-5'-phosphate: A76 (≠ D72), S77 (≠ T73), W102 (= W101), T152 (= T143), D172 (= D166), S174 (≠ T168), Q195 (= Q189), K196 (= K190), N237 (= N243), T238 (= T244)
- binding phosphoserine: H41 (= H37), R42 (= R38), W102 (= W101), T152 (= T143), K196 (= K190)
Sites not aligning to the query:
5yb0B Crystal structure of wild type phosphoserine aminotransferase (psat) from e. Histolytica (see paper)
22% identity, 88% coverage: 36:361/370 of query aligns to 36:347/349 of 5yb0B
Query Sequence
>WP_011034813.1 NCBI__GCF_000007065.1:WP_011034813.1
MKPTRVPKNPCFSSGPCAKHPGYSIEDLNDAPFGRSHRSKPGKEKLAEAIKRTRDMLGLP
SDYLVGIVPASDTGAFEMCLWSMLGCRGVDVLVWESFSKEWATDITKQLKLKDTRVFEAE
YGKLPDLENVDFKNDVVFVWNGTTSGVKVPNGDWIPDSREGLTLCDATSAVFAMDIPYHK
LDVLTFSWQKVLGGEGAHGMLILSPRAVQRLESYTPAWPLPKIFRLTKGGKLNKEIFEGS
TINTPSMLANEDWLATLKWAESVGGLKQLIQRTNENLAVFEAFVAKNNWIHFLAETKEIR
SSTSVCFKVDLSEEKLKELIKMLENEKVAYDIGSYRDAPSGLRIWCGATIEKEDLECLCE
WIEWAYDLVK
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SitesBLAST's Database
SitesBLAST's database includes
(1) SwissProt
entries with experimentally-supported functional features;
and (2) protein structures with bound ligands, from the
BioLip database.
by Morgan Price,
Arkin group
Lawrence Berkeley National Laboratory