Comparing WP_011319057.1 NCBI__GCF_000204075.1:WP_011319057.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 6 hits to proteins with known functional sites (download)
6lrgB Crystal structure of the ternary complex of agre with ornithine and NAD+ (see paper)
97% identity, 98% coverage: 4:695/703 of query aligns to 1:681/681 of 6lrgB
6lrgA Crystal structure of the ternary complex of agre with ornithine and NAD+ (see paper)
96% identity, 99% coverage: 2:698/703 of query aligns to 1:678/678 of 6lrgA
6lrhA Crystal structure of the binary complex of agre c264a mutant with l- arginine (see paper)
95% identity, 99% coverage: 2:697/703 of query aligns to 1:675/675 of 6lrhA
6jv0A Crystal structure of n-terminal domain of argz, bound to product, an arginine dihydrolase from the ornithine-ammonia cycle in cyanobacteria (see paper)
82% identity, 38% coverage: 5:273/703 of query aligns to 3:271/273 of 6jv0A
6juzA Crystal structure of n-terminal domain of argz(n71s) covalently bond to a reaction intermediate (see paper)
81% identity, 38% coverage: 5:273/703 of query aligns to 2:270/272 of 6juzA
Q9SMZ4 Alpha-aminoadipic semialdehyde synthase; cAt-LKR/SDH; LKR/SDH; EC 1.5.1.8; EC 1.5.1.9 from Arabidopsis thaliana (Mouse-ear cress) (see paper)
36% identity, 12% coverage: 271:354/703 of query aligns to 461:548/1064 of Q9SMZ4
Sites not aligning to the query:
>WP_011319057.1 NCBI__GCF_000204075.1:WP_011319057.1
MTSRIRFLMCPPDHYDVDYVINPWMEGNIHKSSRDRAVEQWQGLYQILKEHAIVDLVTPQ
KGWPDLVFTANAGLVLGDNVVLSRFLHKERQGEEPYFKEWFENNGYTVYELPKDLPFEGA
GDALLDREGRWLWAGYGFRSELDSHPYLAKWLDIEVLSLRLIDERFYHLDTCFCPLANGY
LLYYPGAFDSYSNRLIEMRVAPEKRIAIAEADAVNFACNTVNVENIVIMNKASNALKQSL
EDVGFQVLETPLTEFLKAGGAAKCLTLRVTEPVRDEVHANVYVESRIIRIEGHLLDSGLI
NRALDMIVDTGGSFQVLNFNLGEQRQSTSAAEVKVSAPSHEVMEEIISQLIDLGAVDLPQ
DERDAKLEPVTQDGVAPDDFYVSTIYPTEVRINGQWIKVENQRMDGAIAISQTPNGLLAR
CKILRDLKAGEQVIVDVLGIRTIRKTESREQRNTQEFSFMSGGVSSERRVELVVEQVAWE
LRKIRDAGGKVVVTAGPVVIHTGGGEHLSRLIREGYVQALLGGNAIAVHDIEQNMMGTSL
GVDMKRGVAVRGGHRHHLKVINTIRRYGSIAKGVEAGIIRSGVMYECVRNQVPFVLAGSI
RDDGPLPDTQMDLIKAQEEYAKHLEGAEMILMLSSMLHSIGVGNMTPAGVKMVCVDINPA
VVTKLSDRGSIESVGVVTDVGLFLSLLTQQLDKLTSPYVSKVG
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory