Comparing WP_011320452.1 NCBI__GCF_000204075.1:WP_011320452.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 15 hits to proteins with known functional sites (download)
Q820M5 Sucrose synthase; SuSyNe; EC 2.4.1.13 from Nitrosomonas europaea (strain ATCC 19718 / CIP 103999 / KCTC 2705 / NBRC 14298) (see paper)
41% identity, 95% coverage: 34:797/805 of query aligns to 38:790/794 of Q820M5
P49036 Sucrose synthase 2; Sucrose-UDP glucosyltransferase 2; EC 2.4.1.13 from Zea mays (Maize) (see paper)
42% identity, 89% coverage: 80:797/805 of query aligns to 91:805/816 of P49036
Sites not aligning to the query:
3s27H The crystal structure of sucrose synthase-1 from arabidopsis thaliana and its functional implications. (see paper)
39% identity, 97% coverage: 14:797/805 of query aligns to 15:792/797 of 3s27H
3s28A The crystal structure of sucrose synthase-1 in complex with a breakdown product of the udp-glucose (see paper)
39% identity, 97% coverage: 21:797/805 of query aligns to 6:776/781 of 3s28A
P30298 Sucrose synthase 2; OsSUS2; Sucrose synthase 1; RSs1; Sucrose-UDP glucosyltransferase 2; EC 2.4.1.13 from Oryza sativa subsp. japonica (Rice) (see paper)
38% identity, 96% coverage: 27:797/805 of query aligns to 35:797/808 of P30298
Sites not aligning to the query:
P31928 Sucrose-phosphate synthase; UDP-glucose-fructose-phosphate glucosyltransferase; EC 2.4.1.14 from Spinacia oleracea (Spinach) (see 2 papers)
28% identity, 61% coverage: 272:759/805 of query aligns to 176:670/1056 of P31928
Sites not aligning to the query:
Q9FY54 Probable sucrose-phosphate synthase 2; Protein KAONASHI 2; Sucrose-phosphate synthase 2F; AtSPS2F; Sucrose-phosphate synthase 5.2; AtSPS5.2; UDP-glucose-fructose-phosphate glucosyltransferase; EC 2.4.1.14 from Arabidopsis thaliana (Mouse-ear cress) (see paper)
27% identity, 61% coverage: 272:759/805 of query aligns to 177:665/1047 of Q9FY54
2r68A Complex structure of sucrose phosphate synthase (sps)-s6p of halothermothrix orenii (see paper)
28% identity, 57% coverage: 294:751/805 of query aligns to 28:440/456 of 2r68A
Sites not aligning to the query:
2r66A Complex structure of sucrose phosphate synthase (sps)-f6p of halothermothrix orenii (see paper)
28% identity, 57% coverage: 294:751/805 of query aligns to 28:440/456 of 2r66A
Sites not aligning to the query:
Q94BT0 Sucrose-phosphate synthase 1; Sucrose-phosphate synthase 1F; AtSPS1F; Sucrose-phosphate synthase 5.1; AtSPS5.1; UDP-glucose-fructose-phosphate glucosyltransferase; EC 2.4.1.14 from Arabidopsis thaliana (Mouse-ear cress) (see paper)
25% identity, 61% coverage: 272:766/805 of query aligns to 170:668/1043 of Q94BT0
Sites not aligning to the query:
4xsrA Crystal structure of anabaena alr3699/hepe in complex with udp-glucose (see paper)
29% identity, 15% coverage: 621:743/805 of query aligns to 232:348/365 of 4xsrA
Sites not aligning to the query:
4xsuA Crystal structure of anabaena alr3699/hepe in complex with udp and glucose (see paper)
29% identity, 15% coverage: 621:743/805 of query aligns to 235:351/368 of 4xsuA
Sites not aligning to the query:
5d00B Crystal structure of bsha from b. Subtilis complexed with n- acetylglucosaminyl-malate and ump (see paper)
26% identity, 14% coverage: 614:725/805 of query aligns to 225:325/361 of 5d00B
Sites not aligning to the query:
Q47594 O-antigen chain mannosyltransferase B; Mannosyl-N-acetyl-alpha-D-glucosaminyl-diphospho-ditrans,octacis-undecaprenol 3-alpha-mannosyltransferase; EC 2.4.1.349 from Escherichia coli (see paper)
23% identity, 23% coverage: 579:763/805 of query aligns to 218:380/381 of Q47594
5d00A Crystal structure of bsha from b. Subtilis complexed with n- acetylglucosaminyl-malate and ump (see paper)
26% identity, 14% coverage: 614:725/805 of query aligns to 224:324/361 of 5d00A
Sites not aligning to the query:
>WP_011320452.1 NCBI__GCF_000204075.1:WP_011320452.1
MHELFHPIFANGEEKAALQQLIIALDSSGKRYFLRNEILHTFSQYCQQAQKPTYFYYSSS
VGKLIQYTHEIVLAEDSTWFVVRPRIANQEVWRLTSDLAKFDSMPIDAFLDVSDRLVNAY
EPNILEIDLSSFYEASPSISDPRNIGQGLAFLNRYLCSQIATDPQYWVELVYLALRGLQY
DGINLMIGDAIPSGIHLAKQIHAAIKFLSDLPPEEPYEKFYIELQALGFEPGWGNTAERI
LETITLLDRLIDSPQPAVLEAFVARVPAVFRVVLVSIHGWVAQEDVMGRDETLGQVIYVL
EQARSLENKLQQEIKLAGLEVLGIQPHIIILTRLIPHCEGTYCNLRLEKLHNTENAWILR
VPFGEFNPAITNNWISKFEIWPYLETFALDAEKQLLAQFQGKPNLIVGNYSDGNLVAFLL
ARRLKVTHCNIAHSLEKPKNLFSNLYWQNSEEKYHFSVQFTADLITMNAADFIITSSYQE
IFGTPESVGQYESYKFFTMPHLYHVVDGVDLFSPKFNMVPPGVNEQVFFPYSQTADRDPN
LSQSVHDLLFHRQDSQIFGYLEQPQKPPIFAVAPITSIKNLTGLAECFGRSQELQAHSNL
ILLTSKLNIDETTNPEEAREIEKLHNIINQYQLQGHIRWLGLRLPNQEVGEAYRLVADYR
GIYLHFARFEAFGRSILEAMISGLPTFATKFGGSLEILEDQNNGFRINPTDLEGTAEKIL
AFFQECDTHPEHWQEVSQWMSQRIHQKYNWQLHTSQLLALTKIYSFWNFIRPESSEARVR
YMESLFHLIYKPRAEQILAKHMSCH
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory