Comparing WP_011382736.1 AMB_RS01465 NADP-dependent malic enzyme to proteins with known functional sites using BLASTp with E ≤ 0.001.
Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures
Found 20 (the maximum) hits to proteins with known functional sites (download)
6zngF Maeb full-length acetyl-coa bound state (see paper)
49% identity, 97% coverage: 20:764/766 of query aligns to 3:743/753 of 6zngF
P76558 NADP-dependent malic enzyme; NADP-ME; EC 1.1.1.40 from Escherichia coli (strain K12) (see paper)
50% identity, 98% coverage: 18:764/766 of query aligns to 2:754/759 of P76558
6zn7A Maeb malic enzyme domain apoprotein (see paper)
64% identity, 53% coverage: 20:423/766 of query aligns to 2:405/405 of 6zn7A
6zn4A Maeb malic enzyme domain apoprotein (see paper)
64% identity, 53% coverage: 20:423/766 of query aligns to 2:405/406 of 6zn4A
5ceeA Malic enzyme from candidatus phytoplasma aywb in complex with NAD and mg2+ (see paper)
48% identity, 49% coverage: 50:422/766 of query aligns to 29:387/387 of 5ceeA
2a9fA Crystal structure of a putative malic enzyme ((s)-malate:nad+ oxidoreductase (decarboxylating))
52% identity, 45% coverage: 27:373/766 of query aligns to 10:354/383 of 2a9fA
2dvmA NAD complex structure of ph1275 protein from pyrococcus horikoshii
46% identity, 55% coverage: 21:439/766 of query aligns to 1:413/438 of 2dvmA
2haeD Crystal structure of a putative malic enzyme (malate oxidoreductase)
44% identity, 51% coverage: 24:415/766 of query aligns to 1:373/373 of 2haeD
2haeB Crystal structure of a putative malic enzyme (malate oxidoreductase)
44% identity, 51% coverage: 24:415/766 of query aligns to 1:373/373 of 2haeB
6ioxA Crystal structure of porphyromonas gingivalis phosphotransacetylase in complex with acetyl-coa (see paper)
33% identity, 42% coverage: 445:765/766 of query aligns to 4:335/339 of 6ioxA
1xcoD Crystal structure of a phosphotransacetylase from bacillus subtilis in complex with acetylphosphate (see paper)
29% identity, 42% coverage: 446:765/766 of query aligns to 7:325/325 of 1xcoD
Q8ZND6 Phosphate acetyltransferase; Phosphotransacetylase; EC 2.3.1.222; EC 2.3.1.8 from Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) (see paper)
29% identity, 43% coverage: 434:764/766 of query aligns to 381:709/714 of Q8ZND6
Sites not aligning to the query:
Q9SIU0 NAD-dependent malic enzyme 1, mitochondrial; AtNAD-ME1; NAD-malic enzyme 1; EC 1.1.1.39 from Arabidopsis thaliana (Mouse-ear cress) (see paper)
27% identity, 44% coverage: 37:373/766 of query aligns to 141:548/623 of Q9SIU0
Sites not aligning to the query:
2af3C Phosphotransacetylase from methanosarcina thermophila soaked with coenzyme a (see paper)
24% identity, 40% coverage: 446:754/766 of query aligns to 4:317/332 of 2af3C
P38503 Phosphate acetyltransferase; Phosphotransacetylase; EC 2.3.1.8 from Methanosarcina thermophila (see 2 papers)
24% identity, 40% coverage: 446:754/766 of query aligns to 5:318/333 of P38503
Sites not aligning to the query:
6w29A Trypanosoma cruzi malic enzyme in complex with inhibitor (mec013) (see paper)
27% identity, 46% coverage: 18:372/766 of query aligns to 68:483/545 of 6w29A
6w59A Trypanosoma cruzi malic enzyme in complex with inhibitor (mec063) (see paper)
27% identity, 46% coverage: 18:372/766 of query aligns to 66:481/544 of 6w59A
6w56A Trypanosoma cruzi malic enzyme in complex with inhibitor (mec062) (see paper)
27% identity, 46% coverage: 18:372/766 of query aligns to 66:481/544 of 6w56A
6w49A Trypanosoma cruzi malic enzyme in complex with inhibitor (mec010) (see paper)
27% identity, 46% coverage: 18:372/766 of query aligns to 66:481/543 of 6w49A
1gq2A Malic enzyme from pigeon liver (see paper)
26% identity, 47% coverage: 11:373/766 of query aligns to 48:480/555 of 1gq2A
>WP_011382736.1 AMB_RS01465 NADP-dependent malic enzyme
MASNFHTEASRNTEAKGNDTLERDTLLMHASGRPGKIEVVPTKPLATQRDLSLAYSPGVA
FPCLHIARDPSLAYDYTAKGNLVAVISNGTAVLGLGDLGALASKPVMEGKAVLFKRFADV
DSIDLEVDTRDVDEFIAAVRYLGPSFGGINLEDIKAPECFIIEQRLRELMPIPVFHDDQH
GTAIISAAGLINALDLTGRDISTVKVVVNGAGAAGIACIELAKAMGVRHENVVLCDTKGT
IYQGRTEGMNQWKSAHAVPTKARTLAEALDGADVFYGLSVKGAVTPEMVAAMAAKPIIFA
MANPDPEITPEEVKAVRSDAIVATGRSDYPNQINNVLGFPYIFRGALDVRASTINDAMKI
AAARAIAALAREDVPDEVDAAYSGRRLRYGPDYIIPVPFDPRLIASIPPAVAKAAMDSGV
ARKPIIDMGAYKRELSARLDPASAGMQTITDVVKANPKRVVFAEGEEEKQIRAAVAFANA
GLGHPILLGREDRIRETMKNIGLPAAESLDIINSRISPRTKAYTDMLYARLQRRGALYRD
VQRLVNQERNIFGSLMVQSGDADAMVTGLTRNYWQAFEEIKKVIDPTPGELMFGMTVFVV
KGKLVFVADTTVMETPTPQQLADIAVQTAHKARQMGHEPRVAMISYSNFGNPSSERSDRV
REAVGLLDARKVDFVYDGEMAADVALDPELLSHFPFCRLKAPANVLVMPGLYSAHIASKL
LQKLGGTSVIGPILVGLSKPVQITSMDASANDIVNMAVLASYDAVR
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory