SitesBLAST – Find functional sites

 

SitesBLAST

Comparing WP_011384260.1 NCBI__GCF_000009985.1:WP_011384260.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.

Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures

Found 1 hits to proteins with known functional sites (download)

A0A0H2ZQB9 Ergothioneine transporter EgtUBC from Streptococcus pneumoniae serotype 2 (strain D39 / NCTC 7466) (see paper)
30% identity, 35% coverage: 97:186/256 of query aligns to 54:143/506 of A0A0H2ZQB9

query
sites
A0A0H2ZQB9
L
 
V
L
 
L
P
 
Q
V
 
I
V
 
A
S
 
G
L
 
I
L
 
F
R
 
Q
P
 
T
I
 
I
P
 
P
P
 
S
I
 
L
A
 
A
W
 
L
I
 
L
P
 
G
L
 
L
A
 
F
I
 
I
L
 
P
W
 
L
F
 
M
G
 
G
L
 
I
G
 
G
D
 
T
A
 
L
P
 
P
S
 
A
F
 
L
F
 
T
I
 
A
T
 
L
A
 
V
I
 
I
A
 
Y
A
 
A
F
 
I
F
 
F
P
 
P
I
 
I
F
 
L
L
 
Q
N
 
N
A
 
T
F
 
I
A
 
T
G
 
G
G
 
L
L
 
K
A
 
G
V
 
I
G
 
D
G
 
P
R
 
S
Y
 
L
L
 
Q
D
 
E
A
 
A
A
 
G
R
 
I
C
 
A
L
 
F
G
 
G
A
 
M
T
 
T
R
 
R
L
 
W
A
 
E
L
 
R
L
 
L
L
 
K
E
 
K
V
 
F
R
 
E
L
 
I
P
 
P
A
 
L
A
 
A
L
 
M
P
 
P
M
 
V
I
 
I
A
 
M
T
 
S
G
 
G
L
 
I
R
 
R

Sites not aligning to the query:

Query Sequence

>WP_011384260.1 NCBI__GCF_000009985.1:WP_011384260.1
MSSAAIRRAARFSSALSGLGLLVAFWALAAAGLDNPVLLPSPAEVAGVLGEVIGSGAFHR
DLGASLRRVLGGYVLASGLAVPLALVMAAWGPLRQSLLPVVSLLRPIPPIAWIPLAILWF
GLGDAPSFFITAIAAFFPIFLNAFAGGLAVGGRYLDAARCLGATRLALLLEVRLPAALPM
IATGLRIGLGQSWMAVVTAELIAAQSGLGYMIQANRLTLQTAHVLVGMVTIGTLGALMTW
AFTLAERRLLVPWQEN

Or try a new SitesBLAST search

SitesBLAST's Database

SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory