SitesBLAST
Comparing WP_011385142.1 NCBI__GCF_000009985.1:WP_011385142.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
P12995 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; 7,8-diamino-pelargonic acid aminotransferase; DAPA AT; DAPA aminotransferase; 7,8-diaminononanoate synthase; DANS; Diaminopelargonic acid synthase; EC 2.6.1.62 from Escherichia coli (strain K12) (see 4 papers)
37% identity, 99% coverage: 3:435/439 of query aligns to 1:422/429 of P12995
- Y17 (≠ F20) mutation to F: Severely reduces the aminotransferase activity.
- W52 (= W55) binding
- GS 112:113 (= GS 115:116) binding
- Y144 (= Y147) mutation to F: Severely reduces the aminotransferase activity.
- D147 (= D150) mutation to N: Loss of aminotransferase activity.
- D245 (= D251) binding
- R253 (= R259) mutation to A: Has only a small effect on the rate of reaction with DAPA.; mutation to K: Increases aminotransferase activity toward SAM.; mutation to M: Loss of aminotransferase activity.; mutation to Q: Increases aminotransferase activity toward SAM.
- K274 (= K280) binding ; modified: N6-(pyridoxal phosphate)lysine
- G307 (= G314) binding
- PT 308:309 (≠ HS 315:316) binding
- R391 (= R404) binding ; mutation to A: Reduces aminotransferase activity.
1dtyA Crystal structure of adenosylmethionine-8-amino-7-oxonanoate aminotransferase with pyridoxal phosphate cofactor.
37% identity, 99% coverage: 3:435/439 of query aligns to 1:422/429 of 1dtyA
- active site: Y17 (≠ F20), Y144 (= Y147), E211 (= E217), D245 (= D251), A248 (≠ M254), K274 (= K280), Y398 (= Y411)
- binding pyridoxal-5'-phosphate: G112 (= G115), S113 (= S116), Y144 (= Y147), H145 (= H148), D245 (= D251), I247 (≠ V253), K274 (= K280)
6ed7A Crystal structure of 7,8-diaminopelargonic acid synthase bound to inhibitor mac13772
37% identity, 97% coverage: 10:435/439 of query aligns to 7:422/429 of 6ed7A
- active site: Y17 (≠ F20), Y144 (= Y147), D245 (= D251), K274 (= K280)
- binding 2-[(2-nitrophenyl)sulfanyl]acetohydrazide: Y17 (≠ F20), W52 (= W55), W52 (= W55), Y144 (= Y147), D147 (= D150), A217 (= A223), K274 (= K280), R391 (= R404), F393 (≠ L406), F393 (≠ L406)
- binding pyridoxal-5'-phosphate: G112 (= G115), S113 (= S116), Y144 (= Y147), H145 (= H148), D245 (= D251), I247 (≠ V253), K274 (= K280)
1mlzA Crystal structure of 7,8-diaminopelargonic acid synthase in complex with the trans-isomer of amiclenomycin. (see paper)
37% identity, 99% coverage: 3:435/439 of query aligns to 1:421/427 of 1mlzA
- active site: Y17 (≠ F20), Y144 (= Y147), E210 (= E217), D244 (= D251), A247 (≠ M254), K273 (= K280), Y397 (= Y411)
- binding pyridoxal-5'-phosphate: G112 (= G115), S113 (= S116), Y144 (= Y147), H145 (= H148), D244 (= D251), I246 (≠ V253), K273 (= K280), P307 (≠ H315), T308 (≠ S316)
- binding trans-amiclenomycin: W52 (= W55), W53 (= W56), Y144 (= Y147), K273 (= K280), R390 (= R404), F392 (≠ L406)
1mlyA Crystal structure of 7,8-diaminopelargonic acid synthase in complex with the cis isomer of amiclenomycin (see paper)
37% identity, 99% coverage: 3:435/439 of query aligns to 1:421/427 of 1mlyA
- active site: Y17 (≠ F20), Y144 (= Y147), E210 (= E217), D244 (= D251), A247 (≠ M254), K273 (= K280), Y397 (= Y411)
- binding cis-amiclenomycin: W52 (= W55), W53 (= W56), K273 (= K280), R390 (= R404), F392 (≠ L406)
- binding pyridoxal-5'-phosphate: G112 (= G115), S113 (= S116), Y144 (= Y147), H145 (= H148), D244 (= D251), I246 (≠ V253), K273 (= K280), P307 (≠ H315), T308 (≠ S316)
1qj3A Crystal structure of 7,8-diaminopelargonic acid synthase in complex with 7-keto-8-aminopelargonic acid (see paper)
37% identity, 99% coverage: 3:435/439 of query aligns to 1:410/416 of 1qj3A
- active site: Y17 (≠ F20), Y144 (= Y147), E201 (= E217), D235 (= D251), A238 (≠ M254), K264 (= K280), Y386 (= Y411)
- binding 7-keto-8-aminopelargonic acid: Y17 (≠ F20), W52 (= W55), Y144 (= Y147), K264 (= K280), R379 (= R404), F381 (≠ L406)
- binding pyridoxal-5'-phosphate: G112 (= G115), S113 (= S116), Y144 (= Y147), H145 (= H148), G146 (= G149), D235 (= D251), I237 (≠ V253), A238 (≠ M254), K264 (= K280)
6zhkA Crystal structure of adenosylmethionine-8-amino-7-oxononanoate aminotransferase from methanocaldococcus jannaschii dsm 2661
35% identity, 98% coverage: 8:436/439 of query aligns to 5:435/438 of 6zhkA
4cxqA Mycobaterium tuberculosis transaminase bioa complexed with substrate kapa (see paper)
37% identity, 99% coverage: 3:435/439 of query aligns to 1:423/427 of 4cxqA
- active site: Y18 (≠ F20), Y149 (= Y147), E212 (= E217), D246 (= D251), A249 (≠ M254), K275 (= K280), Y399 (= Y411)
- binding 7-keto-8-aminopelargonic acid: W56 (= W55), Y149 (= Y147), G308 (= G314), T310 (≠ S316), R392 (= R404)
- binding pyridoxal-5'-phosphate: G116 (= G115), S117 (= S116), Y149 (= Y147), H150 (= H148), G151 (= G149), E212 (= E217), D246 (= D251), I248 (≠ V253), K275 (= K280), P309 (≠ H315), T310 (≠ S316)
4w1vA Crystal structure of 7,8-diaminopelargonic acid synthase (bioa) from mycobacterium tuberculosis, complexed with a thiazole inhibitor (see paper)
37% identity, 99% coverage: 3:435/439 of query aligns to 1:421/425 of 4w1vA
- active site: Y18 (≠ F20), Y147 (= Y147), E210 (= E217), D244 (= D251), A247 (≠ M254), K273 (= K280), Y397 (= Y411)
- binding dimethyl (2R)-5-(3-fluorophenyl)-1H-pyrrolo[1,2-c][1,3]thiazole-6,7-dicarboxylate 2-oxide: P17 (= P19), Y18 (≠ F20), W54 (= W55), M81 (≠ I82), G83 (≠ A84), Y147 (= Y147), G306 (= G314), P307 (≠ H315), T308 (≠ S316), F392 (≠ L406)
- binding pyridoxal-5'-phosphate: G114 (= G115), S115 (= S116), Y147 (= Y147), H148 (= H148), E210 (= E217), D244 (= D251), I246 (≠ V253), K273 (= K280)
4cxrA Mycobaterium tuberculosis transaminase bioa complexed with 1-(1,3- benzothiazol-2-yl)methanamine (see paper)
37% identity, 99% coverage: 3:435/439 of query aligns to 1:421/425 of 4cxrA
- active site: Y18 (≠ F20), Y147 (= Y147), E210 (= E217), D244 (= D251), A247 (≠ M254), K273 (= K280), Y397 (= Y411)
- binding 1-(1,3-benzothiazol-2-yl)methanamine: Y18 (≠ F20), W54 (= W55), W55 (= W56), A216 (= A223)
- binding pyridoxal-5'-phosphate: G114 (= G115), S115 (= S116), Y147 (= Y147), H148 (= H148), E210 (= E217), D244 (= D251), I246 (≠ V253), K273 (= K280), P307 (≠ H315), T308 (≠ S316)
3du4A Crystal structure of 7-keto-8-aminopelargonic acid bound 7,8- diaminopelargonic acid synthase in bacillus subtilis (see paper)
36% identity, 93% coverage: 14:423/439 of query aligns to 11:429/448 of 3du4A