Comparing WP_011386516.1 NCBI__GCF_000009985.1:WP_011386516.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 8 hits to proteins with known functional sites (download)
6vh5D Crystal structure of prephenate dehydratase from brucella melitensis biovar abortus 2308 in complex with phenylalanine
60% identity, 94% coverage: 11:281/289 of query aligns to 9:282/282 of 6vh5D
7am0B Gqqa- a novel type of quorum quenching acylases (see paper)
55% identity, 96% coverage: 8:283/289 of query aligns to 1:277/278 of 7am0B
2qmxA The crystal structure of l-phe inhibited prephenate dehydratase from chlorobium tepidum tls (see paper)
40% identity, 92% coverage: 11:275/289 of query aligns to 4:273/278 of 2qmxA
P0A9J8 Bifunctional chorismate mutase/prephenate dehydratase; Chorismate mutase-prephenate dehydratase; P-protein; EC 5.4.99.5; EC 4.2.1.51 from Escherichia coli (strain K12)
35% identity, 95% coverage: 3:276/289 of query aligns to 97:376/386 of P0A9J8
Sites not aligning to the query:
7alzA Gqqa- a novel type of quorum quenching acylases (see paper)
60% identity, 38% coverage: 175:283/289 of query aligns to 84:193/194 of 7alzA
3mwbA The crystal structure of prephenate dehydratase in complex with l-phe from arthrobacter aurescens to 2.0a
35% identity, 84% coverage: 35:277/289 of query aligns to 29:276/306 of 3mwbA
3mwbB The crystal structure of prephenate dehydratase in complex with l-phe from arthrobacter aurescens to 2.0a
34% identity, 92% coverage: 13:277/289 of query aligns to 5:273/303 of 3mwbB
3luyA Putative chorismate mutase from bifidobacterium adolescentis
24% identity, 92% coverage: 13:279/289 of query aligns to 8:289/326 of 3luyA
>WP_011386516.1 NCBI__GCF_000009985.1:WP_011386516.1
MNDQPNPDQAIAFQGEPGAYSHLACRNAYPGMQPLPCATFEDTFAAVREGRARYAMIPID
NSVAGRVADVHHLMPYAGLHIIAEHFERISHHLLVVPGATLDTIKTVKSHVHALGQCRNL
IRELGLKVIVGTDTAGAAAELAERQDPTMAAIASELAAEAYGLVSLKAGIEDAEHNTTRF
VVLAREALEPNPNQPCVTTFVFRVRNVAAALYKALGGFATNGINMTRLESYMVGGEFAAT
QFYADVEGHPTQRNLRLALEELDFFSHEVRILGVYPRHPFRMKQQSGAE
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory