SitesBLAST
Comparing WP_011424699.1 NCBI__GCF_000092045.1:WP_011424699.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
4mzuF Crystal structure of fdtd, a bifunctional ketoisomerase/n- acetyltransferase from shewanella denitrificans (see paper)
40% identity, 81% coverage: 19:154/168 of query aligns to 5:144/294 of 4mzuF
- binding coenzyme a: N81 (= N77), D82 (= D78), K83 (≠ T79), G100 (= G110), A101 (≠ S111), L106 (= L116), G118 (= G128), A119 (= A129), T124 (= T134), K125 (= K135), I134 (≠ A144), N136 (≠ V146), R139 (= R149)
- binding thymine: W20 (≠ G34), Q21 (≠ T35), C38 (≠ S52)
Sites not aligning to the query:
4mzuB Crystal structure of fdtd, a bifunctional ketoisomerase/n- acetyltransferase from shewanella denitrificans (see paper)
40% identity, 81% coverage: 19:154/168 of query aligns to 5:143/290 of 4mzuB
- binding coenzyme a: F72 (= F68), T80 (= T76), N81 (= N77), D82 (= D78), K83 (≠ T79), P85 (= P81), G99 (= G110), A100 (≠ S111), G117 (= G128), A118 (= A129), T123 (= T134), K124 (= K135), I133 (≠ A144), R138 (= R149)
- binding magnesium ion: G58 (vs. gap), N76 (≠ G72)
- binding thymine: W20 (≠ G34), Q21 (≠ T35), C38 (≠ S52), A39 (≠ S53)
Sites not aligning to the query:
G3XD01 UDP-2-acetamido-3-amino-2,3-dideoxy-D-glucuronate N-acetyltransferase; UDP-D-GlcNAc3NA N-acetyltransferase; UDP-2-acetamido-3-amino-2,3-dideoxy-alpha-D-glucuronic acid 3-N-acetyltransferase; EC 2.3.1.201 from Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) (see paper)
44% identity, 79% coverage: 24:156/168 of query aligns to 32:157/191 of G3XD01
- K136 (= K135) mutation to A: Reduction in catalytic activity.; mutation to R: No effect on catalytic activity.
7s45A Crystal structure of an n-acetyltransferase, c80t mutant, from helicobacter pullorum in the presence of acetyl coenzyme a and dtdp (see paper)
40% identity, 76% coverage: 11:137/168 of query aligns to 1:131/141 of 7s45A
- binding acetyl coenzyme *a: W64 (≠ C58), T82 (= T76), N83 (= N77), D84 (= D78), K85 (≠ T79), Y86 (= Y80), P87 (= P81), L110 (= L116), T128 (= T134), K129 (= K135)
- binding thymidine-5'-diphosphate: F44 (= F56), E46 (vs. gap)
7s42A Crystal structure of an n-acetyltransferase from helicobacter pullorum in the presence of coenzyme a and dtdp-3-acetamido-3,6-dideoxy-d- galactose (see paper)
41% identity, 76% coverage: 11:137/168 of query aligns to 1:135/145 of 7s42A
- binding [(2~{R},3~{R},4~{S},5~{R},6~{R})-4-acetamido-6-methyl-3,5-bis(oxidanyl)oxan-2-yl] [[(2~{R},3~{S},5~{R})-5-[5-methyl-2,4-bis(oxidanylidene)pyrimidin-1-yl]-3-oxidanyl-oxolan-2-yl]methoxy-oxidanyl-phosphoryl] hydrogen phosphate: F44 (= F56), E46 (vs. gap), W64 (≠ C58), N83 (= N77), D84 (= D78), Y92 (≠ T92)
- binding coenzyme a: C82 (≠ T76), D84 (= D78), K85 (≠ T79), Y86 (= Y80), P87 (= P81), L114 (= L116), T132 (= T134), K133 (= K135)
7s41A Crystal structure of an n-acetyltransferase from helicobacter pullorum in the presence of coenzyme a and dtdp-3-acetamido-3,6-dideoxy-d- glucose (see paper)
41% identity, 76% coverage: 11:137/168 of query aligns to 1:135/145 of 7s41A
- binding [(2~{R},3~{R},4~{S},5~{S},6~{R})-4-acetamido-6-methyl-3,5-bis(oxidanyl)oxan-2-yl] [[(2~{R},3~{S},5~{R})-5-[5-methyl-2,4-bis(oxidanylidene)pyrimidin-1-yl]-3-oxidanyl-oxolan-2-yl]methoxy-oxidanyl-phosphoryl] hydrogen phosphate : F44 (= F56), E46 (vs. gap), W64 (≠ C58), N83 (= N77), D84 (= D78), Y92 (≠ T92)
- binding coenzyme a: C82 (≠ T76), D84 (= D78), K85 (≠ T79), Y86 (= Y80), P87 (= P81), L114 (= L116), T132 (= T134), K133 (= K135)
7s3wA Crystal structure of an n-acetyltransferase from helicobacter pullorum in the presence of coenzyme a and dtdp-3-amino-3,6-dideoxy-d- galactose (see paper)
41% identity, 76% coverage: 11:137/168 of query aligns to 1:135/145 of 7s3wA
- binding oxidized coenzyme a: C82 (≠ T76), D84 (= D78), K85 (≠ T79), Y86 (= Y80), P87 (= P81), L114 (= L116), T132 (= T134), K133 (= K135)
- binding (3R,4S,5R,6R)-4-amino-3,5-dihydroxy-6-methyloxan-2-yl][hydroxy-[[(2R,3S,5R)-3-hydroxy-5-(5-methyl-2,4-dioxopyrimidin-1-yl)oxolan-2-yl]methoxy]phosphoryl] hydrogen phosphate: F44 (= F56), E46 (vs. gap), D84 (= D78), Y92 (≠ T92)
7s3uA Crystal structure of an n-acetyltransferase from helicobacter pullorum in the presence of coenzyme a and dtdp-3-amino-3,6-dideoxy-d-glucose (see paper)
41% identity, 76% coverage: 11:137/168 of query aligns to 1:135/145 of 7s3uA
- binding coenzyme a: C82 (≠ T76), N83 (= N77), D84 (= D78), K85 (≠ T79), Y86 (= Y80), P87 (= P81), L114 (= L116), T132 (= T134), K133 (= K135)
- binding [(3R,4S,5S,6R)-4-amino-3,5-dihydroxy-6-methyloxan-2-yl][hydroxy-[[(2R,3S,5R)-3-hydroxy-5-(5-methyl-2,4-dioxopyrimidin-1-yl)oxolan-2-yl]methoxy]phosphoryl] hydrogen phosphate: F44 (= F56), E46 (vs. gap), D84 (= D78), Y92 (≠ T92)
3mqhA Crystal structure of the 3-n-acetyl transferase wlbb from bordetella petrii in complex with coa and udp-3-amino-2-acetamido-2,3-dideoxy glucuronic acid (see paper)
41% identity, 77% coverage: 24:152/168 of query aligns to 32:153/191 of 3mqhA
- binding coenzyme a: F76 (= F68), T84 (= T76), N85 (= N77), V86 (≠ A83), Y87 (≠ I84), P89 (= P86), G111 (= G110), A112 (≠ S111), A130 (= A129), N135 (≠ T134), V145 (≠ A144), P148 (= P147), R150 (= R149)
- binding (2S,3S,4R,5R,6R)-5-(acetylamino)-4-amino-6-{[(R)-{[(R)-{[(2R,3S,4R,5R)-5-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)-3,4-dihydroxytetrahydrofuran-2-yl]methoxy}(hydroxy)phosphoryl]oxy}(hydroxy)phosphoryl]oxy}-3-hydroxytetrahydro-2H-pyran-2-carboxylic acid: F46 (≠ E38), Q60 (≠ S52), N61 (≠ S53), Y66 (≠ C58), F76 (= F68), N85 (= N77), V86 (≠ A83), R95 (≠ T92), Y99 (≠ W96)
Sites not aligning to the query:
- binding coenzyme a: 161
- binding (2S,3S,4R,5R,6R)-5-(acetylamino)-4-amino-6-{[(R)-{[(R)-{[(2R,3S,4R,5R)-5-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)-3,4-dihydroxytetrahydrofuran-2-yl]methoxy}(hydroxy)phosphoryl]oxy}(hydroxy)phosphoryl]oxy}-3-hydroxytetrahydro-2H-pyran-2-carboxylic acid: 24, 28
3mqgC Crystal structure of the 3-n-acetyl transferase wlbb from bordetella petrii in complex with acetyl-coa (see paper)
41% identity, 77% coverage: 24:152/168 of query aligns to 33:154/192 of 3mqgC
- binding acetyl coenzyme *a: Y67 (≠ C58), F77 (= F68), P80 (≠ H71), T85 (= T76), N86 (= N77), V87 (≠ A83), Y88 (≠ I84), P90 (= P86), G112 (= G110), A113 (≠ S111), F128 (≠ Q126), G130 (= G128), A131 (= A129), N136 (≠ T134), V146 (≠ A144), P149 (= P147), R151 (= R149)
- binding uridine-5'-monophosphate: F47 (≠ E38)
- binding uridine-5'-diphosphate: S41 (≠ R32), N62 (≠ S53)
Sites not aligning to the query:
3fsbA Crystal structure of qdtc, the dtdp-3-amino-3,6-dideoxy-d-glucose n- acetyl transferase from thermoanaerobacterium thermosaccharolyticum in complex with coa and dtdp-3-amino-quinovose (see paper)
39% identity, 74% coverage: 27:151/168 of query aligns to 107:219/260 of 3fsbA
- binding coenzyme a: F150 (≠ G70), A178 (≠ G110), A179 (≠ S111), G196 (= G128), A197 (= A129), V212 (≠ A144)
- binding [(3R,4S,5S,6R)-4-amino-3,5-dihydroxy-6-methyloxan-2-yl][hydroxy-[[(2R,3S,5R)-3-hydroxy-5-(5-methyl-2,4-dioxopyrimidin-1-yl)oxolan-2-yl]methoxy]phosphoryl] hydrogen phosphate: G114 (= G34), H132 (≠ S52), F150 (≠ G70)
Sites not aligning to the query:
3fscA Crystal structure of qdtc, the dtdp-3-amino-3,6-dideoxy-d-glucose n- acetyl transferase from thermoanaerobacterium thermosaccharolyticum in complex with coa and dtdp-3-amino-fucose (see paper)
38% identity, 76% coverage: 24:151/168 of query aligns to 104:219/259 of 3fscA
- binding coenzyme a: F150 (≠ G70), A178 (≠ G110), A179 (≠ S111), G196 (= G128), A197 (= A129), V212 (≠ A144)
- binding (3R,4S,5R,6R)-4-amino-3,5-dihydroxy-6-methyloxan-2-yl][hydroxy-[[(2R,3S,5R)-3-hydroxy-5-(5-methyl-2,4-dioxopyrimidin-1-yl)oxolan-2-yl]methoxy]phosphoryl] hydrogen phosphate: K112 (≠ R32), G114 (= G34), T115 (= T35), H132 (≠ S52), S133 (= S53)
Sites not aligning to the query:
3fs8A Crystal structure of qdtc, the dtdp-3-amino-3,6-dideoxy-d-glucose n- acetyl transferase from thermoanaerobacterium thermosaccharolyticum in complex with acetyl-coa (see paper)
38% identity, 76% coverage: 24:151/168 of query aligns to 104:219/259 of 3fs8A
Sites not aligning to the query:
5u2kA Crystal structure of galactoside o-acetyltransferase complex with coa (h3 space group)
32% identity, 70% coverage: 42:158/168 of query aligns to 74:189/190 of 5u2kA
1krvA Galactoside acetyltransferase in complex with coa and pnp-beta-gal (see paper)
36% identity, 57% coverage: 61:156/168 of query aligns to 95:186/201 of 1krvA
- binding 4-nitrophenyl beta-D-galactopyranoside: M126 (≠ W96)
- binding coenzyme a: A104 (≠ G70), S110 (≠ T76), T112 (≠ D78), W138 (≠ S108), G140 (= G110), S141 (= S111), N146 (≠ L116), A159 (= A129), P177 (= P147), R179 (= R149), R182 (≠ G152)
Sites not aligning to the query:
1kruA Galactoside acetyltransferase in complex with iptg and coenzyme a (see paper)
36% identity, 57% coverage: 61:156/168 of query aligns to 95:186/201 of 1kruA
Sites not aligning to the query:
P07464 Galactoside O-acetyltransferase; GAT; Acetyl-CoA:galactoside 6-O-acetyltransferase; Thiogalactoside acetyltransferase; Thiogalactoside transacetylase; EC 2.3.1.18 from Escherichia coli (strain K12) (see 3 papers)
36% identity, 57% coverage: 61:156/168 of query aligns to 96:187/203 of P07464
- H115 (≠ Y80) mutation to A: Results in an 1800-fold decrease in catalytic activity.
- S142 (= S111) binding in other chain
- A160 (= A129) binding in other chain
- TK 165:166 (= TK 134:135) binding acetyl-CoA
- R180 (= R149) binding acetyl-CoA
- R183 (≠ G152) binding in other chain
Sites not aligning to the query:
- 1 modified: Initiator methionine, Removed; Partial
- 17 binding substrate
- 71 binding substrate
- 85 binding in other chain; binding in other chain
- 93 binding substrate
1krrA Galactoside acetyltransferase in complex with acetyl-coenzyme a (see paper)
36% identity, 57% coverage: 61:156/168 of query aligns to 95:186/200 of 1krrA
- binding acetyl coenzyme *a: I103 (= I69), A104 (≠ G70), P105 (≠ H71), T112 (≠ D78), H114 (≠ Y80), G140 (= G110), S141 (= S111), N146 (≠ L116), G158 (= G128), A159 (= A129), A174 (= A144), P177 (= P147), R182 (≠ G152)
Sites not aligning to the query:
7l82AAA Putative acetyl transferase protein (see paper)
35% identity, 75% coverage: 26:151/168 of query aligns to 108:216/216 of 7l82AAA
- binding [(2~{R},3~{R},4~{S},5~{S},6~{R})-3-acetamido-5-[[(1~{S})-1-[2-[3-[[(2~{R})-4-[[[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-4-oxidanyl-3-phosphonooxy-oxolan-2-yl]methoxy-oxidanyl-phosphoryl]oxy-oxidanyl-phosphoryl]oxy-3,3-dimethyl-2-oxidanyl-butanoyl]amino]propanoylamino]ethylsulfanyl]-1-oxidanyl-ethyl]amino]-6-methyl-4-oxidanyl-oxan-2-yl] [[(2~{R},3~{S},4~{R},5~{R})-5-[2,4-bis(oxidanylidene)pyrimidin-1-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] hydrogen phosphate: Y168 (≠ S108), T171 (≠ S111), G193 (= G128), M194 (≠ A129), I209 (≠ A144)
Sites not aligning to the query:
- binding [(2~{R},3~{R},4~{S},5~{S},6~{R})-3-acetamido-5-[[(1~{S})-1-[2-[3-[[(2~{R})-4-[[[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-4-oxidanyl-3-phosphonooxy-oxolan-2-yl]methoxy-oxidanyl-phosphoryl]oxy-oxidanyl-phosphoryl]oxy-3,3-dimethyl-2-oxidanyl-butanoyl]amino]propanoylamino]ethylsulfanyl]-1-oxidanyl-ethyl]amino]-6-methyl-4-oxidanyl-oxan-2-yl] [[(2~{R},3~{S},4~{R},5~{R})-5-[2,4-bis(oxidanylidene)pyrimidin-1-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] hydrogen phosphate: 10, 12, 39, 40, 73, 74
7l81AAA Putative acetyl transferase protein (see paper)
35% identity, 75% coverage: 26:151/168 of query aligns to 108:216/216 of 7l81AAA
Sites not aligning to the query:
Query Sequence
>WP_011424699.1 NCBI__GCF_000092045.1:WP_011424699.1
MIASNVKLGDGSVIHHRDLVNLYGCTIGAGTRIGTFVEIQKNVVVGRDCKISSHSFLCEG
VTLEDGVFIGHGVMFTNDTYPRAINPDGSLQTETDWILIPTLVKRHASIGSNATILPGVI
IGEAAQVGAGAVVTKDVPDGAIVAGVPARVIGRVNDGPVDMFALGEME
Or try a new SitesBLAST search
SitesBLAST's Database
SitesBLAST's database includes
(1) SwissProt
entries with experimentally-supported functional features;
and (2) protein structures with bound ligands, from the
BioLip database.
by Morgan Price,
Arkin group
Lawrence Berkeley National Laboratory