Comparing WP_011425039.1 NCBI__GCF_000092045.1:WP_011425039.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 8 hits to proteins with known functional sites (download)
Q88E47 Homogentisate 1,2-dioxygenase; HGDO; Homogentisate oxygenase; Homogentisic acid oxidase; Homogentisicase; EC 1.13.11.5 from Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440) (see paper)
55% identity, 96% coverage: 15:447/453 of query aligns to 5:429/433 of Q88E47
3zdsA Structure of homogentisate 1,2-dioxygenase in complex with reaction intermediates of homogentisate with oxygen. (see paper)
55% identity, 95% coverage: 19:447/453 of query aligns to 1:421/425 of 3zdsA
3zdsF Structure of homogentisate 1,2-dioxygenase in complex with reaction intermediates of homogentisate with oxygen. (see paper)
55% identity, 95% coverage: 19:447/453 of query aligns to 2:422/426 of 3zdsF
3zdsC Structure of homogentisate 1,2-dioxygenase in complex with reaction intermediates of homogentisate with oxygen. (see paper)
55% identity, 95% coverage: 19:447/453 of query aligns to 2:422/426 of 3zdsC
4aq6D Substrate bound homogentisate 1,2-dioxygenase (see paper)
55% identity, 95% coverage: 19:447/453 of query aligns to 3:423/427 of 4aq6D
Q93099 Homogentisate 1,2-dioxygenase; Homogentisate oxygenase; Homogentisic acid oxidase; Homogentisicase; EC 1.13.11.5 from Homo sapiens (Human) (see 13 papers)
51% identity, 94% coverage: 19:446/453 of query aligns to 4:434/445 of Q93099
Q9Y041 Homogentisate 1,2-dioxygenase; Homogentisate oxygenase; Homogentisic acid oxidase; Homogentisicase; EC 1.13.11.5 from Caenorhabditis elegans (see paper)
51% identity, 95% coverage: 17:446/453 of query aligns to 5:433/437 of Q9Y041
1ey2A Human homogentisate dioxygenase with fe(ii) (see paper)
50% identity, 92% coverage: 19:435/453 of query aligns to 3:413/419 of 1ey2A
>WP_011425039.1 NCBI__GCF_000092045.1:WP_011425039.1
MDQTAIQAADAEAATANRLKYMPGFGNDFETESLPGALPQGQNSPQKCNYGLYAEQLSGS
PFTAPRGTNERSWLYRIRPSVRHTRRFSNASYPLWKTAPCLDEHSLPLGQLRWDPIPAPE
EKLTFLQGVRTMTTAGDAATQVGMSAHAYVFNEDMVDDYFFDADGELLIVPQLGAIRVFT
EMGIMDVEPLEICLVPRGMMFKVMTTGEQTASRGYICENYGAKFTLPDRGPIGANCLANP
RDFKTPVAAFEDKEKPCRVHVKWCGKFYVTEIGHSPLDVVAWHGNYAPYKYDLRTFSPVG
AISFDHPDPSIFSVLTAPTEDAGTANVDFVIFPPRWLVAEHTFRPPWYHRNIMSEFMGLI
HGQYDAKEEGFVPGGISLHNMMLPHGPDALAFEKASNVELKPVKLDHTMAFMFETRYPQQ
LTKYAAELETLQDDYLECWDGLERKFDGTPGIK
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory