SitesBLAST
Comparing WP_011445460.1 NCBI__GCF_000013325.1:WP_011445460.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
3o0hB Crystal structure of glutathione reductase from bartonella henselae
45% identity, 99% coverage: 6:452/453 of query aligns to 2:445/459 of 3o0hB
- active site: S13 (= S17), I37 (≠ V41), C41 (= C45), C46 (= C50), K49 (= K53), D74 (≠ K78), P75 (≠ M79), Y177 (= Y181), E181 (= E185), I314 (= I320), A433 (= A440), H435 (= H442), E440 (= E447)
- binding flavin-adenine dinucleotide: I9 (= I13), G10 (= G14), G12 (= G16), S13 (= S17), G14 (= G18), A32 (= A36), E33 (= E37), E34 (= E38), T40 (= T44), C41 (= C45), G45 (= G49), C46 (= C50), K49 (= K53), R112 (= R116), A113 (= A117), T139 (= T143), G140 (= G144), Y177 (= Y181), R262 (= R268), N265 (≠ K271), G301 (= G307), D302 (= D308), Q308 (= Q314), L309 (= L315), T310 (= T316)
Sites not aligning to the query:
4dnaA Crystal structure of putative glutathione reductase from sinorhizobium meliloti 1021
47% identity, 99% coverage: 6:452/453 of query aligns to 2:447/461 of 4dnaA
- active site: Y37 (≠ V41), C41 (= C45), C46 (= C50), K49 (= K53), Y178 (= Y181), E182 (= E185), A435 (= A440), H437 (= H442), E442 (= E447)
- binding flavin-adenine dinucleotide: I9 (= I13), G10 (= G14), G11 (≠ A15), G12 (= G16), G14 (= G18), E33 (= E37), E34 (= E38), G39 (= G43), T40 (= T44), C41 (= C45), G45 (= G49), C46 (= C50), K49 (= K53), R112 (= R116), A113 (= A117), V139 (≠ T143), G140 (= G144), Y178 (= Y181), R264 (= R268), G303 (= G307), D304 (= D308), Q310 (= Q314), L311 (= L315), T312 (= T316)
Sites not aligning to the query:
5ebkA Trypanothione reductase in complex with 6-(sec-butoxy)-2-((3- chlorophenyl)thio)pyrimidin-4-amine (see paper)
40% identity, 98% coverage: 8:453/453 of query aligns to 5:472/486 of 5ebkA
- active site: L48 (≠ V41), C52 (= C45), C57 (= C50), K60 (= K53), Y198 (= Y181), E202 (= E185), G459 (≠ A440), H461 (= H442), E466 (= E447)
- binding flavin-adenine dinucleotide: G11 (= G14), G13 (= G16), S14 (= S17), D35 (≠ E37), V36 (≠ E38), A46 (vs. gap), A47 (vs. gap), G50 (= G43), T51 (= T44), C52 (= C45), G56 (= G49), K60 (= K53), G127 (≠ A117), A159 (= A142), T160 (= T143), G161 (= G144), S178 (= S161), Y198 (= Y181), R287 (= R268), R290 (≠ K271), G326 (= G307), D327 (= D308), M333 (≠ Q314), L334 (= L315), T335 (= T316), A338 (= A319)
- binding 6-sec-Butoxy-2-[(3-chlorophenyl)sulfanyl]-4-pyrimidinamine: C52 (= C45), V53 (= V46), Y110 (= Y101), Y221 (≠ N201), R222 (= R202), R222 (= R202), D224 (≠ E204), R228 (= R208), N252 (= N232), N254 (≠ P234), I285 (≠ T266), H461 (= H442), E466 (= E447)
Sites not aligning to the query:
2x50A Crystal structure of trypanothione reductase from leishmania infantum in complex with NADPH and silver (see paper)
40% identity, 98% coverage: 8:453/453 of query aligns to 4:471/485 of 2x50A
- active site: L47 (≠ V41), C51 (= C45), C56 (= C50), K59 (= K53), Y197 (= Y181), E201 (= E185), G458 (≠ A440), H460 (= H442), E465 (= E447)
- binding silver ion: C51 (= C45), C56 (= C50), T334 (= T316)
- binding flavin-adenine dinucleotide: G12 (= G16), S13 (= S17), V33 (≠ A36), D34 (≠ E37), A45 (vs. gap), G49 (= G43), T50 (= T44), C51 (= C45), G55 (= G49), C56 (= C50), K59 (= K53), G126 (≠ A117), T159 (= T143), R286 (= R268), R289 (≠ K271), G325 (= G307), D326 (= D308), L333 (= L315), T334 (= T316)
- binding nadph dihydro-nicotinamide-adenine-dinucleotide phosphate: G195 (≠ A179), G196 (= G180), Y197 (= Y181), I198 (= I182), E201 (= E185), Y220 (≠ N201), R221 (= R202), R227 (= R208), A283 (= A265), I284 (≠ T266), G285 (= G267), R286 (= R268), M332 (≠ Q314), A364 (= A346)
Sites not aligning to the query:
2w0hA X ray structure of leishmania infantum trypanothione reductase in complex with antimony and NADPH (see paper)
40% identity, 98% coverage: 8:453/453 of query aligns to 4:471/485 of 2w0hA
- active site: L47 (≠ V41), C51 (= C45), C56 (= C50), K59 (= K53), Y197 (= Y181), E201 (= E185), G458 (≠ A440), H460 (= H442), E465 (= E447)
- binding flavin-adenine dinucleotide: G10 (= G14), G12 (= G16), S13 (= S17), G14 (= G18), V33 (≠ A36), D34 (≠ E37), A45 (vs. gap), G49 (= G43), T50 (= T44), C51 (= C45), G55 (= G49), C56 (= C50), K59 (= K53), G126 (≠ A117), T159 (= T143), R286 (= R268), R289 (≠ K271), G325 (= G307), D326 (= D308), L333 (= L315), T334 (= T316)
- binding nadph dihydro-nicotinamide-adenine-dinucleotide phosphate: G195 (≠ A179), G196 (= G180), Y197 (= Y181), I198 (= I182), E201 (= E185), Y220 (≠ N201), R221 (= R202), R227 (= R208), N253 (≠ P234), A283 (= A265), I284 (≠ T266), G285 (= G267), R286 (= R268), M332 (≠ Q314), A364 (= A346)
- binding antimony (iii) ion: C51 (= C45), C56 (= C50), T334 (= T316)
Sites not aligning to the query:
6i7nA Trypanothione reductase from leismania infantum in complex with trl156 (see paper)
40% identity, 98% coverage: 8:453/453 of query aligns to 6:473/490 of 6i7nA
- active site: C53 (= C45), C58 (= C50), K61 (= K53), Y199 (= Y181), E203 (= E185), H462 (= H442), E467 (= E447)
- binding flavin-adenine dinucleotide: G12 (= G14), G14 (= G16), S15 (= S17), G16 (= G18), D36 (≠ E37), A47 (vs. gap), A48 (vs. gap), G51 (= G43), T52 (= T44), C53 (= C45), G57 (= G49), C58 (= C50), K61 (= K53), G128 (≠ A117), A160 (= A142), T161 (= T143), G162 (= G144), R288 (= R268), D328 (= D308), L335 (= L315), T336 (= T316), A339 (= A319)
Sites not aligning to the query:
6i7nB Trypanothione reductase from leismania infantum in complex with trl156 (see paper)
40% identity, 98% coverage: 8:453/453 of query aligns to 5:472/488 of 6i7nB
- active site: C52 (= C45), C57 (= C50), K60 (= K53), Y198 (= Y181), E202 (= E185), H461 (= H442), E466 (= E447)
- binding flavin-adenine dinucleotide: G11 (= G14), G15 (= G18), D35 (≠ E37), A46 (vs. gap), A47 (vs. gap), G50 (= G43), T51 (= T44), C52 (= C45), G56 (= G49), C57 (= C50), K60 (= K53), G127 (≠ A117), A159 (= A142), T160 (= T143), G161 (= G144), Y198 (= Y181), R287 (= R268), G326 (= G307), D327 (= D308), M333 (≠ Q314), L334 (= L315), T335 (= T316)
- binding ~{N}-(4-azanylbutyl)-~{N}-(2-azanyl-2-oxidanylidene-ethyl)-7-(3-azanyl-3-oxidanylidene-propyl)-4-(dimethylamino)-2-(2-naphthalen-2-ylethylamino)pyrrolo[2,3-d]pyrimidine-6-carboxamide: L17 (≠ V20), E18 (≠ R21), Y110 (= Y101)
Sites not aligning to the query:
6er5A X-ray structure of trypanothione reductase from leishmania infantum in complex with 2-(diethylamino)ethyl 4-((3-(4-nitrophenyl)-3- oxopropyl)amino)benzoate (see paper)
40% identity, 98% coverage: 8:453/453 of query aligns to 5:472/488 of 6er5A
- active site: C52 (= C45), C57 (= C50), K60 (= K53), Y198 (= Y181), E202 (= E185), H461 (= H442), E466 (= E447)
- binding 2-(diethylamino)ethyl 4-((3-(4-nitrophenyl)-3-oxopropyl)amino)benzoate: Y221 (≠ N201), R222 (= R202), R228 (= R208), I285 (≠ T266)
- binding flavin-adenine dinucleotide: G11 (= G14), G13 (= G16), G15 (= G18), V34 (≠ A36), D35 (≠ E37), V36 (≠ E38), A46 (vs. gap), A47 (vs. gap), G50 (= G43), T51 (= T44), C52 (= C45), G56 (= G49), C57 (= C50), K60 (= K53), G127 (≠ A117), T160 (= T143), Y198 (= Y181), R287 (= R268), R290 (≠ K271), G326 (= G307), D327 (= D308), M333 (≠ Q314), L334 (= L315), T335 (= T316)
Sites not aligning to the query:
4apnA Structure of tr from leishmania infantum in complex with a diarylpirrole-based inhibitor (see paper)
40% identity, 98% coverage: 8:453/453 of query aligns to 5:472/488 of 4apnA
- active site: L48 (≠ V41), C52 (= C45), C57 (= C50), K60 (= K53), Y198 (= Y181), E202 (= E185), G459 (≠ A440), H461 (= H442), E466 (= E447)
- binding flavin-adenine dinucleotide: G11 (= G14), G13 (= G16), S14 (= S17), D35 (≠ E37), A46 (vs. gap), G50 (= G43), T51 (= T44), G56 (= G49), C57 (= C50), K60 (= K53), G127 (≠ A117), T160 (= T143), R287 (= R268), R290 (≠ K271), G326 (= G307), D327 (= D308), L334 (= L315), T335 (= T316)
- binding 4-[[1-(4-ethylphenyl)-2-methyl-5-(4-methylsulfanylphenyl)pyrrol-3-yl]methyl]thiomorpholine: L17 (≠ V20), E18 (≠ R21), S109 (≠ A100), Y110 (= Y101), M113 (≠ T104), F396 (= F378), T397 (≠ R379)
- binding nadph dihydro-nicotinamide-adenine-dinucleotide phosphate: G196 (≠ A179), G197 (= G180), Y198 (= Y181), I199 (= I182), E202 (= E185), Y221 (≠ N201), R222 (= R202), R228 (= R208), A284 (= A265), I285 (≠ T266), G286 (= G267), R287 (= R268), M333 (≠ Q314), A365 (= A346)
Sites not aligning to the query:
4adwA Crystal structure of leishmania infantum trypanothione reductase in complex with NADPH and trypanothione (see paper)
40% identity, 98% coverage: 8:453/453 of query aligns to 5:472/488 of 4adwA
- active site: L48 (≠ V41), C52 (= C45), C57 (= C50), K60 (= K53), Y198 (= Y181), E202 (= E185), G459 (≠ A440), H461 (= H442), E466 (= E447)
- binding flavin-adenine dinucleotide: G11 (= G14), G13 (= G16), S14 (= S17), G15 (= G18), D35 (≠ E37), A46 (vs. gap), G50 (= G43), T51 (= T44), C52 (= C45), G56 (= G49), C57 (= C50), K60 (= K53), G127 (≠ A117), A159 (= A142), T160 (= T143), R287 (= R268), R290 (≠ K271), G326 (= G307), D327 (= D308), M333 (≠ Q314), L334 (= L315), T335 (= T316), H461 (= H442), P462 (= P443)
- binding bis(gamma-glutamyl-cysteinyl-glycinyl)spermidine: F396 (= F378), L399 (vs. gap), H461 (= H442), E466 (= E447)
- binding nadph dihydro-nicotinamide-adenine-dinucleotide phosphate: G196 (≠ A179), G197 (= G180), Y198 (= Y181), I199 (= I182), Y221 (≠ N201), R222 (= R202), R228 (= R208), I285 (≠ T266), G286 (= G267), R287 (= R268), A365 (= A346)
Sites not aligning to the query:
2yauA X-ray structure of the leishmania infantum tryopanothione reductase in complex with auranofin (see paper)
40% identity, 98% coverage: 8:453/453 of query aligns to 5:472/488 of 2yauA
- active site: L48 (≠ V41), C52 (= C45), C57 (= C50), K60 (= K53), Y198 (= Y181), E202 (= E185), G459 (≠ A440), H461 (= H442), E466 (= E447)
- binding gold ion: C52 (= C45), C57 (= C50), T335 (= T316)
- binding flavin-adenine dinucleotide: G11 (= G14), G13 (= G16), G15 (= G18), D35 (≠ E37), V36 (≠ E38), A46 (vs. gap), A47 (vs. gap), G50 (= G43), T51 (= T44), C52 (= C45), G56 (= G49), C57 (= C50), K60 (= K53), F126 (≠ R116), G127 (≠ A117), A159 (= A142), T160 (= T143), R287 (= R268), R290 (≠ K271), D327 (= D308), L334 (= L315), T335 (= T316)
- binding nadph dihydro-nicotinamide-adenine-dinucleotide phosphate: G196 (≠ A179), G197 (= G180), Y198 (= Y181), I199 (= I182), E202 (= E185), Y221 (≠ N201), R222 (= R202), R228 (= R208), I285 (≠ T266), G286 (= G267), R287 (= R268), M333 (≠ Q314), A365 (= A346)
- binding 2,3,4,6-tetra-O-acetyl-1-thio-beta-D-glucopyranose: F396 (= F378), L399 (vs. gap), H461 (= H442)
Sites not aligning to the query:
6t98A Trypanothione reductase from leishmania infantum in complex with 9a (see paper)
40% identity, 98% coverage: 8:453/453 of query aligns to 6:473/489 of 6t98A
- active site: C53 (= C45), C58 (= C50), K61 (= K53), Y199 (= Y181), E203 (= E185), H462 (= H442), E467 (= E447)
- binding flavin-adenine dinucleotide: G12 (= G14), G14 (= G16), S15 (= S17), G16 (= G18), V35 (≠ A36), D36 (≠ E37), A47 (vs. gap), G51 (= G43), T52 (= T44), C53 (= C45), G57 (= G49), C58 (= C50), K61 (= K53), G128 (≠ A117), T161 (= T143), Y199 (= Y181), I200 (= I182), R288 (= R268), R291 (≠ K271), G327 (= G307), D328 (= D308), M334 (≠ Q314), L335 (= L315), T336 (= T316)
- binding 4-[3-methyl-1-[4-[4-(2-phenylethyl)-1,3-thiazol-2-yl]-3-(2-piperidin-4-ylethoxy)phenyl]-1,2,3-triazol-3-ium-4-yl]butan-1-amine: W22 (≠ R24), S106 (≠ R96), S110 (≠ A100), M114 (≠ T104), D117 (≠ N107)
Sites not aligning to the query:
6t97A Trypanothione reductase from leismania infantum in complex with trl190
40% identity, 98% coverage: 8:453/453 of query aligns to 6:473/489 of 6t97A
- active site: C53 (= C45), C58 (= C50), K61 (= K53), Y199 (= Y181), E203 (= E185), H462 (= H442), E467 (= E447)
- binding flavin-adenine dinucleotide: G12 (= G14), G14 (= G16), S15 (= S17), G16 (= G18), V35 (≠ A36), D36 (≠ E37), A47 (vs. gap), A48 (vs. gap), T52 (= T44), C53 (= C45), G57 (= G49), C58 (= C50), K61 (= K53), G128 (≠ A117), T161 (= T143), G162 (= G144), Y199 (= Y181), I200 (= I182), R288 (= R268), R291 (≠ K271), G327 (= G307), D328 (= D308), M334 (≠ Q314), L335 (= L315), T336 (= T316)
- binding 4-[1-[4-[4-(2-phenylethyl)-1,3-thiazol-2-yl]-3-(2-piperidin-4-ylethoxy)phenyl]-1,2,3-triazol-4-yl]butan-1-amine: E19 (≠ R21), W22 (≠ R24), S106 (≠ R96), S110 (≠ A100), Y111 (= Y101), M114 (≠ T104), D117 (≠ N107)
Sites not aligning to the query:
6t95A Trypanothione reductase from leismania infantum in complex with 4a (see paper)
40% identity, 98% coverage: 8:453/453 of query aligns to 6:473/489 of 6t95A
- active site: C53 (= C45), C58 (= C50), K61 (= K53), Y199 (= Y181), E203 (= E185), H462 (= H442), E467 (= E447)
- binding flavin-adenine dinucleotide: G12 (= G14), G14 (= G16), S15 (= S17), G16 (= G18), D36 (≠ E37), V37 (≠ E38), A47 (vs. gap), A48 (vs. gap), G51 (= G43), T52 (= T44), C53 (= C45), G57 (= G49), C58 (= C50), K61 (= K53), G128 (≠ A117), T161 (= T143), G162 (= G144), Y199 (= Y181), R288 (= R268), R291 (≠ K271), G327 (= G307), D328 (= D308), M334 (≠ Q314), L335 (= L315), T336 (= T316)
- binding 1-[2-[5-[4-(4-azanylbutyl)-3-methyl-1,2,3-triazol-3-ium-1-yl]-2-[4-(2-phenylethyl)-1,3-thiazol-2-yl]phenoxy]ethyl]imidazolidin-2-one: E19 (≠ R21), W22 (≠ R24), S106 (≠ R96), I107 (≠ L97), S110 (≠ A100), Y111 (= Y101), M114 (≠ T104), D117 (≠ N107)
Sites not aligning to the query:
2rabA Structure of glutathione amide reductase from chromatium gracile in complex with NAD (see paper)
40% identity, 98% coverage: 8:453/453 of query aligns to 4:444/451 of 2rabA
- active site: S13 (= S17), L37 (≠ V41), C41 (= C45), C46 (= C50), K49 (= K53), Y173 (= Y181), E177 (= E185), I310 (= I320), A431 (= A440), H433 (= H442), E438 (= E447)
- binding flavin-adenine dinucleotide: G10 (= G14), G12 (= G16), S13 (= S17), G14 (= G18), I32 (≠ A36), E33 (= E37), S34 (≠ E38), T40 (= T44), G45 (= G49), C46 (= C50), K49 (= K53), H110 (≠ R116), A111 (= A117), T135 (= T143), G136 (= G144), R258 (= R268), G297 (= G307), D298 (= D308), Q304 (= Q314), L305 (= L315), T306 (= T316)
- binding nicotinamide-adenine-dinucleotide: K49 (= K53), I169 (≠ S177), G172 (= G180), Y173 (= Y181), I174 (= I182), E177 (= E185), A193 (≠ N201), L194 (≠ R202), E195 (≠ S203), V227 (≠ F235), V256 (≠ T266), G257 (= G267), Q304 (= Q314), V337 (≠ A346)
D0VWY5 Glutathione amide reductase; GAR; EC 1.8.1.16 from Marichromatium gracile (Chromatium gracile) (see 2 papers)
40% identity, 98% coverage: 8:453/453 of query aligns to 5:448/463 of D0VWY5
- SG 14:15 (= SG 17:18) binding FAD
- E34 (= E37) binding FAD
- T41 (= T44) binding FAD
- C42 (= C45) modified: Disulfide link with 47, Redox-active
- C47 (= C50) modified: Disulfide link with 42, Redox-active
- K50 (= K53) binding FAD; binding NAD(+)
- HA 113:114 (≠ RA 116:117) binding FAD
- 174:180 (vs. 179:185, 71% identical) binding NAD(+)
- LE 197:198 (≠ RS 202:203) binding NAD(+)
- V230 (≠ F235) binding NAD(+)
- G261 (= G267) binding NAD(+)
- D302 (= D308) binding FAD
- Q308 (= Q314) binding NAD(+)
- QLT 308:310 (= QLT 314:316) binding FAD
- V341 (≠ A346) binding NAD(+)
- H437 (= H442) active site, Proton acceptor; binding FAD
Sites not aligning to the query:
- 1 modified: Initiator methionine, Removed
- 2 binding Ni(2+)
- 2:463 modified: mature protein, Glutathione amide reductase
- 3 binding Ni(2+)
- 4 binding Ni(2+)
2r9zB Glutathione amide reductase from chromatium gracile (see paper)
40% identity, 98% coverage: 8:453/453 of query aligns to 4:446/453 of 2r9zB
- active site: S13 (= S17), L37 (≠ V41), C41 (= C45), C46 (= C50), K49 (= K53), G74 (≠ K78), Y174 (= Y181), E178 (= E185), I312 (= I320), A433 (= A440), H435 (= H442), E440 (= E447)
- binding flavin-adenine dinucleotide: G12 (= G16), S13 (= S17), G14 (= G18), I32 (≠ A36), E33 (= E37), S34 (≠ E38), G39 (= G43), T40 (= T44), C41 (= C45), G45 (= G49), C46 (= C50), K49 (= K53), H111 (≠ R116), A112 (= A117), T136 (= T143), G137 (= G144), I175 (= I182), R260 (= R268), G299 (= G307), D300 (= D308), Q306 (= Q314), L307 (= L315), T308 (= T316)
8pf3A Crystal structure of trypanosoma brucei trypanothione reductase in complex with 1-(3,4-dichlorobenzyl)-4-(((5-((4-fluorophenethyl) carbamoyl)furan-2-yl)methyl)(4-fluorophenyl)carbamoyl)-1-(3- phenylpropyl)piperazin-1-ium (see paper)
40% identity, 98% coverage: 8:453/453 of query aligns to 6:473/489 of 8pf3A
- binding flavin-adenine dinucleotide: I11 (= I13), G12 (= G14), G14 (= G16), S15 (= S17), G16 (= G18), D36 (≠ E37), V37 (≠ E38), A47 (vs. gap), A48 (vs. gap), G51 (= G43), T52 (= T44), G57 (= G49), C58 (= C50), K61 (= K53), G128 (≠ A117), T161 (= T143), F199 (≠ Y181), R288 (= R268), R291 (≠ K271), G327 (= G307), D328 (= D308), M334 (≠ Q314), L335 (= L315), T336 (= T316)
- binding 4-[(3,4-dichlorophenyl)methyl]-~{N}-(4-fluorophenyl)-~{N}-[[5-[2-(4-fluorophenyl)ethylcarbamoyl]furan-2-yl]methyl]-4-(3-phenylpropyl)-1,4$l^{4}-diazinane-1-carboxamide: V59 (= V51), L63 (= L55), P337 (= P317), I340 (= I320), F397 (= F378), P399 (= P380), L400 (vs. gap), H462 (= H442), P463 (= P443), T464 (≠ S444), E467 (= E447), E468 (= E448)
6oezA Crystal structure of trypanothione reductase from trypanosoma brucei in complex with inhibitor (+)-n-(cyclobutylmethyl)-3-{5-[1- (pyrrolidin-1-yl)cyclohexyl]-2-(1-{[(2s)-pyrro-lidin-2-yl]methyl}-1h- indol-5-yl)-1,3-thiazol-4-yl}prop-2-yn-1-amine (see paper)
40% identity, 98% coverage: 8:453/453 of query aligns to 2:469/485 of 6oezA
- active site: S11 (= S17), L45 (≠ V41), C49 (= C45), C54 (= C50), K57 (= K53), G82 (≠ K78), S83 (≠ M79), F195 (≠ Y181), E199 (= E185), I336 (= I320), G456 (≠ A440), H458 (= H442), E463 (= E447)
- binding 4-(2-hydroxyethyl)-1-piperazine ethanesulfonic acid: F393 (= F378), P395 (= P380), L396 (vs. gap), P459 (= P443), T460 (≠ S444), S461 (≠ M445), E463 (= E447), E464 (= E448), S467 (≠ L451)
- binding flavin-adenine dinucleotide: I7 (= I13), G8 (= G14), G10 (= G16), S11 (= S17), D32 (≠ E37), A43 (vs. gap), A44 (vs. gap), G47 (= G43), T48 (= T44), C49 (= C45), G53 (= G49), C54 (= C50), K57 (= K53), W123 (≠ R116), G124 (≠ A117), T157 (= T143), G158 (= G144), R284 (= R268), R287 (≠ K271), G323 (= G307), D324 (= D308), M330 (≠ Q314), L331 (= L315), T332 (= T316)
- binding N-(cyclobutylmethyl)-3-{5-[1-(pyrrolidin-1-yl)cyclohexyl]-2-(1-{[(2S)-pyrrolidin-2-yl]methyl}-1H-indol-5-yl)-1,3-thiazol-4-yl}prop-2-yn-1-amine: E15 (≠ R21), W18 (≠ R24), Y107 (= Y101), M110 (≠ T104), D113 (≠ N107)
Sites not aligning to the query:
6oeyA Crystal structure of trypanothione reductase from trypanosoma brucei in complex with inhibitor (+)-5-{5-[1-(pyrrolidin-1-yl)cyclohexyl]-1, 3-thiazol-2-yl}-1-{[(2s)-pyrrolidin-2-yl]methyl}-1h-indole (see paper)
40% identity, 98% coverage: 8:453/453 of query aligns to 2:469/485 of 6oeyA
- active site: S11 (= S17), L45 (≠ V41), C49 (= C45), C54 (= C50), K57 (= K53), G82 (≠ K78), S83 (≠ M79), F195 (≠ Y181), E199 (= E185), I336 (= I320), G456 (≠ A440), H458 (= H442), E463 (= E447)
- binding 4-(2-hydroxyethyl)-1-piperazine ethanesulfonic acid: F393 (= F378), P395 (= P380), L396 (vs. gap), P459 (= P443), T460 (≠ S444), S461 (≠ M445), E463 (= E447), E464 (= E448), S467 (≠ L451)
- binding flavin-adenine dinucleotide: G8 (= G14), G10 (= G16), S11 (= S17), G12 (= G18), D32 (≠ E37), V33 (≠ E38), A43 (vs. gap), A44 (vs. gap), G47 (= G43), T48 (= T44), C49 (= C45), G53 (= G49), C54 (= C50), K57 (= K53), G124 (≠ A117), T157 (= T143), G158 (= G144), R284 (= R268), R287 (≠ K271), G323 (= G307), D324 (= D308), M330 (≠ Q314), L331 (= L315), T332 (= T316)
- binding 5-{5-[1-(pyrrolidin-1-yl)cyclohexyl]-1,3-thiazol-2-yl}-1-{[(2S)-pyrrolidin-2-yl]methyl}-1H-indole: W18 (≠ R24), S106 (≠ A100), G109 (≠ S103), M110 (≠ T104), D113 (≠ N107)
Sites not aligning to the query:
Query Sequence
>WP_011445460.1 NCBI__GCF_000013325.1:WP_011445460.1
MAEQEFDYDLFVIGAGSGGVRASRIAASHGARVAVAEEYRVGGTCVIRGCVPKKLLVYGS
HFAEELQDAANYGWTVEKMSFDWPTLRDAVLKDVDRLNTAYTSTLENNKVERFLERATVT
GPNTVRLGGSGREISARYILVATGAWPVMPDFPGNEHCITSNEVFHLENLPKRVVISGAG
YIAMEFAGIFNALGCHVTVVNRSETILRGYDESLRDRLLQITMARGIEYKFNCPFEKVEK
QADGSLQVFLAGQPDPLAADIVLVATGRLPKTDGLGLETAGIELGAQGEIPVDDHGRTAC
DSIYAVGDVTNRVQLTPIAIREGHAFADRVFGGKDTSVSYDCIPSAVFSQPPLAGVGLTE
SQARQAFGGNIKVYSSDFRPMKNIFGHRPERGLYKMIVEATSERVLGIHMIGPEAPEILQ
AAAIAVKAGLTKADFDATVALHPSMAEELVLMR
Or try a new SitesBLAST search
SitesBLAST's Database
SitesBLAST's database includes
(1) SwissProt
entries with experimentally-supported functional features;
and (2) protein structures with bound ligands, from the
BioLip database.
by Morgan Price,
Arkin group
Lawrence Berkeley National Laboratory