SitesBLAST

SitesBLAST – Find functional sites

SitesBLAST

Comparing WP_011445904.1 NCBI__GCF_000013325.1:WP_011445904.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.

Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures

Found 20 (the maximum) hits to proteins with known functional sites (download)

6derA Crystal structure of candida albicans acetohydroxyacid synthase in complex with the herbicide metosulam (see paper)
47% identity, 99% coverage: 6:579/582 of query aligns to 15:593/600 of 6derA

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active site: Y35 (= Y26), G37 (= G28), G38 (= G29), A39 (= A30), I40 (≠ V31), E61 (= E52), T84 (= T75), F123 (= F114), Q124 (= Q115), E125 (= E116), K173 (= K164), K231 (≠ R225), M267 (= M261), V294 (= V288), V410 (= V395), L435 (= L420), G436 (= G421), M438 (= M423), D463 (= D448), N490 (= N475), E492 (≠ W477), Q493 (≠ M478), M495 (= M480), V496 (= V481), W499 (= W484), L521 (= L507), N526 (≠ G512), V527 (≠ W513)
binding flavin-adenine dinucleotide: R163 (= R154), G220 (= G213), A221 (≠ G214), G222 (= G215), N225 (= N218), T247 (= T241), L248 (= L242), Q249 (≠ M243), L265 (= L259), H268 (= H262), G287 (= G281), A288 (= A282), R289 (= R283), D291 (= D285), R293 (= R287), V294 (= V288), E320 (≠ D305), I321 (= I306), N325 (≠ S310), G338 (= G323), D339 (= D324), V340 (= V328), Q414 (= Q399), M415 (= M400), G433 (= G418)
binding Metosulam: R293 (= R287), M495 (= M480), W499 (= W484), A570 (≠ S556)
binding magnesium ion: D463 (= D448), N490 (= N475), E492 (≠ W477)
binding (3z)-4-{[(4-amino-2-methylpyrimidin-5-yl)methyl]amino}-3-mercaptopent-3-en-1-yl trihydrogen diphosphate: V410 (= V395), G411 (= G396), Q412 (= Q397), H413 (= H398), G436 (= G421), M438 (= M423), G462 (= G447), D463 (= D448), A464 (= A449), S465 (= S450), N490 (= N475), E492 (≠ W477), Q493 (≠ M478), G494 (= G479), M495 (= M480), V496 (= V481)
binding 2-{3-[(4-amino-2-methylpyrimidin-5-yl)methyl]-4-methyl-2-oxo-2,3-dihydro-1,3-thiazol-5-yl}ethyl trihydrogendiphosphate: V410 (= V395), G411 (= G396), Q412 (= Q397), H413 (= H398), G436 (= G421), M438 (= M423), G462 (= G447), D463 (= D448), A464 (= A449), S465 (= S450), M468 (= M453), N490 (= N475), E492 (≠ W477), Q493 (≠ M478), G494 (= G479), V496 (= V481)

6desA Crystal structure of candida albicans acetohydroxyacid synthase in complex with the herbicide propoxycarbazone (see paper)
47% identity, 99% coverage: 6:579/582 of query aligns to 13:591/598 of 6desA

query
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G

D

D

A

E

E

V

V

A

E

G

K

T

Q

M

Q

D

N

D

D

E

L

A

R

K

K

active site: Y33 (= Y26), G35 (= G28), G36 (= G29), A37 (= A30), I38 (≠ V31), E59 (= E52), T82 (= T75), F121 (= F114), Q122 (= Q115), E123 (= E116), K171 (= K164), K229 (≠ R225), M265 (= M261), V292 (= V288), V408 (= V395), L433 (= L420), G434 (= G421), M436 (= M423), D461 (= D448), N488 (= N475), E490 (≠ W477), Q491 (≠ M478), M493 (= M480), V494 (= V481), W497 (= W484), L519 (= L507), N524 (≠ G512), V525 (≠ W513)
binding methyl 2-[(4-methyl-5-oxidanylidene-3-propoxy-1,2,4-triazol-1-yl)carbonylsulfamoyl]benzoate: M265 (= M261), D290 (= D286), R291 (= R287), W497 (= W484)
binding flavin-adenine dinucleotide: R161 (= R154), G218 (= G213), A219 (≠ G214), G220 (= G215), N223 (= N218), T245 (= T241), L246 (= L242), Q247 (≠ M243), L263 (= L259), G285 (= G281), A286 (= A282), R287 (= R283), D289 (= D285), R291 (= R287), V292 (= V288), E318 (≠ D305), I319 (= I306), N323 (≠ S310), D337 (= D324), V338 (= V328), Q412 (= Q399), M413 (= M400), G431 (= G418)
binding magnesium ion: D461 (= D448), N488 (= N475), E490 (≠ W477)
binding 2-{3-[(4-amino-2-methylpyrimidin-5-yl)methyl]-4-methyl-2-oxo-2,3-dihydro-1,3-thiazol-5-yl}ethyl trihydrogendiphosphate: V408 (= V395), G409 (= G396), Q410 (= Q397), H411 (= H398), G434 (= G421), M436 (= M423), G460 (= G447), D461 (= D448), A462 (= A449), S463 (= S450), N488 (= N475), E490 (≠ W477), Q491 (≠ M478), G492 (= G479), M493 (= M480), V494 (= V481)

6depA Crystal structure of candida albicans acetohydroxyacid synthase in complex with the herbicide sulfometuron methyl (see paper)
47% identity, 99% coverage: 6:579/582 of query aligns to 13:591/598 of 6depA

query
sites
6depA

S

T

G

G

A

G

E

E

I

I

L

F

V

H

E

E

S

M

L

M

V

L

A

R

K

H

G

K

V

V

E

D

F

T

V

V

F

F

G

G

Y
|
Y

P

A

G
|
G

A
|
A

V
x
I

L

L

P

P

I

V

Y

F

D

D

A

A

L

I

F

Y

G

N

D

S

E

D

R

K

L

F

R

K

H

F

I

V

L

L

V

P

R

R

H

H

E
|
E

A

Q

G

G

A

A

A

G

H

H

A

M

A

A

E

E

G

G

Y

Y

A

A

R

R

A

A

T

S

G

G

K

K

P

P

G

G

V

V

L

L

V

V

T
|
T

S

S

G

G

P

P

G

G

A

A

T

T

N

N

A

V

V

I

T

T

G

P

I

M

A

A

D

D

A

A

F

L

M

M

D

D

S

G

I

V

P

P

M

L

V

V

I

F

T

S

G

G

Q

Q

V

V

P

P

T

T

A

T

L

A

I

I

G

G

S

T

D

D

A

A

F
|
F

Q
|
Q

E
|
E

A

A

D

D

T

I

I

V

G

G

I

I

T

S

R

R

H

S

C

C

T

T

K

K

H

W

N

N

Y

V

L

M

V

V

K

K

D

N

P

V

S

A

Q

E

L

L

A

P

A

R

T

R

I

I

D

N

E

E

A

A

F

F

R

E

I

I

A

A

T

T

E

T

G

G

R
|
R

P

P

G

G

P

P

V

V

V

L

I

V

D

D

I

L

P

P

K
|
K

D

D

V

V

Q

-

I

-

A

T

T

A

A

S

A

I

W

L

S

R

S

E

A

S

A

I

P

P

Q

I

Q

N

R

T

N

T

R

L

Y

P

A

S

P

A

Q

V

T

S

E

E

G

F

G

T

A

S

K

E

E

A

I

I

A

K

E

R

A

A

I

A

E

N

L

I

I

L

A

N

K

K

A

A

K

K

A

K

P

P

V

I

F

I

Y

Y

T

A

G
|
G

G
x
A

G
|
G

V

I

I

L

N
|
N

A

-

G

N

P

E

E

Q

A

G

A

P

R
x
K

L

L

R

K

E

E

L

L

Q

A

S

D

L

K

T

A

G

N

A

I

P

P

V

V

T

T

S

T

T
|
T

L
|
L

M
x
Q

G

G

L

L

G

G

A

A

F

F

P

D

A

Q

D

R

H

D

P

P

A

K

W

S

L

L

G

D

M

M

L
|
L

G
|
G

M
|
M

H

H

G

G

T

S

Y

A

E

A

A

A

N

N

M

T

T

A

M

I

N

Q

R

N

A

A

D

D

L

C

V

I

C

A

I

L

G
|
G

A
|
A

R
|
R

F

F

D
|
D

R
|
R

V
|
V

T

T

G

G

R

N

L

I

D

S

A

K

F

F

S

A

P

P

N

E

S

A

K

K

K

L

-

A

-

S

-

E

-

G

-

R

-

G

-

I

I

L

H

H

I

F

D
x
E

I
|
I

D

S

R

P

A

K

S
x
N

I

I

N

N

K

K

T

V

V

V

Q

E

V

A

D

T

L

E

P

A

V

I

I

E

G

G

D
|
D

C

-

G

-

K

-

V
|
V

L

T

A

A

Q

N

L

L

I

-

E

Q

A

S

W

F

L

I

E

P

R

L

G

V

Y

D

Q

S

K

I

Q

E

D

N

L

R

T

P

E

E

W

W

N

F

A

N

R

K

I

I

D

N

G

E

W

W

R

K

A

K

R

K

Q

Y

S

P

L

Y

A

S

F

Y

P

Q

R

L

R

E

-

T

-

P

G

G

K

S

E

L

I

I

M

K

P

P

Q

Q

L

T

A

L

I

I

E

K

R

E

L

I

Y

S

E

D

-

Q

-

A

L

Q

T

T

R

Y

H

N

K

K

E

E

P

V

I

I

I

V

S

T

T

T

E

G

V
|
V

G
|
G

Q
|
Q

H
|
H

Q

Q

M
|
M

W

W

A

A

Q

Q

H

H

F

F

H

T

F

W

M

T

K

Q

P

P

N

R

K

T

W

M

L

I

T

T

S

S

G
|
G

G

G

L
|
L

G
|
G

T

T

M
|
M

G

G

Y

Y

G

G

L

L

P

P

A

A

I

I

G

G

A

A

Q

Q

A

V

G

A

F

K

P

P

D

D

A

A

L

I

V

V

I

I

D

D

I

I

A

D

G
|
G

D
|
D

A
|
A

S
|
S

I

F

Q

N

M
|
M

N

T

I

L

Q

T

E

E

L

L

G

S

T

S

A

A

T

V

Q

Q

Y

A

R

G

L

A

P

P

V

I

K

K

V

V

F

C

V

V

L

L

N

N

N
|
N

E

E

W
x
E

M
x
Q

G
|
G

M
|
M

V
|
V

R

T

Q

Q

W
|
W

Q

Q

E

S

L

L

T

F

Y

Y

E

E

S

H

R

R

Y

Y

S

S

N

H

S

T

Y

H

S

Q

D

-

S

S

L

N

P

P

D

D

F

F

V

M

K

K

L
|
L

A

A

E

E

A

S

Y

M

G
x
N

W
x
V

K

K

G

G

I

I

R

R

I

I

T

T

D

N

E

Q

S

Q

E

E

L

L

D

K

A

S

G

G

I

V

Q

K

A

E

M

F

I

L

D

D

H

A

D

T

G

E

P

P

V

V

F

L

V

L

D

E

C

V

L

I

V

V

A

E

K

K

E

K

A

V

N

P

C

V

F

L

P

P

M

M

I

V

P

P

S

A

G

G

A

K

A

A

H

L

T

D

D

D

M

F

I

I

L

L

Y

W

G

D

D

A

E

E

V

V

A

E

G

K

T

Q

M

Q

D

N

D

D

E

L

A

R

K

K

active site: Y33 (= Y26), G35 (= G28), G36 (= G29), A37 (= A30), I38 (≠ V31), E59 (= E52), T82 (= T75), F121 (= F114), Q122 (= Q115), E123 (= E116), K171 (= K164), K229 (≠ R225), M265 (= M261), V292 (= V288), V408 (= V395), L433 (= L420), G434 (= G421), M436 (= M423), D461 (= D448), N488 (= N475), E490 (≠ W477), Q491 (≠ M478), M493 (= M480), V494 (= V481), W497 (= W484), L519 (= L507), N524 (≠ G512), V525 (≠ W513)
binding methyl 2-[({[(4,6-dimethylpyrimidin-2-yl)amino]carbonyl}amino)sulfonyl]benzoate: D290 (= D286), R291 (= R287), M493 (= M480), W497 (= W484)
binding flavin-adenine dinucleotide: R161 (= R154), G218 (= G213), A219 (≠ G214), G220 (= G215), N223 (= N218), T245 (= T241), L246 (= L242), Q247 (≠ M243), L263 (= L259), G264 (= G260), G285 (= G281), A286 (= A282), R287 (= R283), D289 (= D285), R291 (= R287), V292 (= V288), E318 (≠ D305), I319 (= I306), N323 (≠ S310), D337 (= D324), V338 (= V328), M413 (= M400), G431 (= G418)
binding magnesium ion: D461 (= D448), N488 (= N475), E490 (≠ W477)
binding (3z)-4-{[(4-amino-2-methylpyrimidin-5-yl)methyl]amino}-3-mercaptopent-3-en-1-yl trihydrogen diphosphate: V408 (= V395), G409 (= G396), Q410 (= Q397), H411 (= H398), G434 (= G421), M436 (= M423), G460 (= G447), D461 (= D448), A462 (= A449), S463 (= S450), M466 (= M453), N488 (= N475), E490 (≠ W477), Q491 (≠ M478), G492 (= G479), M493 (= M480), V494 (= V481)
binding 2-{3-[(4-amino-2-methylpyrimidin-5-yl)methyl]-4-methyl-2-oxo-2,3-dihydro-1,3-thiazol-5-yl}ethyl trihydrogendiphosphate: V408 (= V395), G409 (= G396), Q410 (= Q397), H411 (= H398), G434 (= G421), M436 (= M423), G460 (= G447), D461 (= D448), A462 (= A449), S463 (= S450), M466 (= M453), N488 (= N475), E490 (≠ W477), Q491 (≠ M478), G492 (= G479), M493 (= M480), V494 (= V481)

6demA Crystal structure of candida albicans acetohydroxyacid synthase in complex with the herbicide bensulfuron methyl (see paper)
47% identity, 99% coverage: 6:579/582 of query aligns to 13:590/597 of 6demA

query
sites
6demA

S

T

G

G

A

G

E

E

I

I

L

F

V

H

E

E

S

M

L

M

V

L

A

R

K

H

G

K

V

V

E

D

F

T

V

V

F

F

G

G

Y
|
Y

P

A

G
|
G

A
|
A

V
x
I

L

L

P

P

I

V

Y

F

D

D

A

A

L

I

F

Y

G

N

D

S

E

D

R

K

L

F

R

K

H

F

I

V

L

L

V

P

R

R

H

H

E
|
E

A

Q

G

G

A

A

A

G

H

H

A

M

A

A

E

E

G

G

Y

Y

A

A

R

R

A

A

T

S

G

G

K

K

P

P

G

G

V

V

L

L

V

V

T
|
T

S

S

G

G

P

P

G

G

A

A

T

T

N

N

A

V

V

I

T

T

G

P

I

M

A

A

D

D

A

A

F

L

M

M

D

D

S

G

I

V

P

P

M

L

V

V

I

F

T

S

G

G

Q

Q

V

V

P

P

T

T

A

T

L

A

I

I

G

G

S

T

D

D

A

A

F
|
F

Q
|
Q

E
|
E

A

A

D

D

T

I

I

V

G

G

I

I

T

S

R

R

H

S

C

C

T

T

K

K

H

W

N

N

Y

V

L

M

V

V

K

K

D

N

P

V

S

A

Q

E

L

L

A

P

A

R

T

R

I

I

D

N

E

E

A

A

F

F

R

E

I

I

A

A

T

T

E

T

G

G

R
|
R

P

P

G

G

P

P

V

V

V

L

I

V

D

D

I

L

P

P

K
|
K

D

D

V

V

Q

-

I

-

A

-

T

T

A

A

A

S

W

I

S

L

S

R

A

E

A

S

P

I

Q

P

Q

I

R

N

N

T

R

T

Y

L

A

P

P

S

Q

V

T

S

E

E

G

F

G

T

A

S

K

E

E

A

I

I

A

K

E

R

A

A

I

A

E

N

L

I

I

L

A

N

K

K

A

A

K

K

A

K

P

P

V

I

F

I

Y

Y

T

A

G
|
G

G
x
A

G
|
G

V

I

I

L

N
|
N

A

-

G

N

P

E

E

Q

A

G

A

P

R
x
K

L

L

R

K

E

E

L

L

Q

A

S

D

L

K

T

A

G

N

A

I

P

P

V

V

T

T

S

T

T
|
T

L
|
L

M
x
Q

G

G

L

L

G

G

A

A

F

F

P

D

A

Q

D

R

H

D

P

P

A

K

W

S

L

L

G

D

M

M

L
|
L

G

G

M
|
M

H

H

G

G

T

S

Y

A

E

A

A

A

N

N

M

T

T

A

M

I

N

Q

R

N

A

A

D

D

L

C

V

I

C

A

I

L

G
|
G

A
|
A

R
|
R

F

F

D
|
D

R
|
R

V
|
V

T

T

G

G

R

N

L

I

D

S

A

K

F

F

S

A

P

P

N

E

S

A

K

K

K

L

-

A

-

S

-

E

-

G

-

R

-

G

-

I

I

L

H

H

I

F

D
x
E

I
|
I

D

S

R

P

A

K

S
x
N

I

I

N

N

K

K

T

V

V

V

Q

E

V

A

D

T

L

E

P

A

V

I

I

E

G

G

D
|
D

C

-

G

-

K

-

V
|
V

L

T

A

A

Q

N

L

L

I

-

E

Q

A

S

W

F

L

I

E

P

R

L

G

V

Y

D

Q

S

K

I

Q

E

D

N

L

R

T

P

E

E

W

W

N

F

A

N

R

K

I

I

D

N

G

E

W

W

R

K

A

K

R

K

Q

Y

S

P

L

Y

A

S

F

Y

P

Q

R

L

R

E

-

T

-

P

G

G

K

S

E

L

I

I

M

K

P

P

Q

Q

L

T

A

L

I

I

E

K

R

E

L

I

Y

S

E

D

-

Q

-

A

L

Q

T

T

R

Y

H

N

K

K

E

E

P

V

I

I

I

V

S

T

T

T

E

G

V
|
V

G
|
G

Q
|
Q

H
|
H

Q

Q

M
|
M

W

W

A

A

Q

Q

H

H

F

F

H

T

F

W

M

T

K

Q

P

P

N

R

K

T

W

M

L

I

T

T

S

S

G
|
G

G

G

L
|
L

G
|
G

T

T

M
|
M

G

G

Y

Y

G

G

L

L

P

P

A

A

I

I

G

G

A

A

Q

Q

A

V

G

A

F

K

P

P

D

D

A

A

L

I

V

V

I

I

D

D

I

I

A

D

G
|
G

D
|
D

A
|
A

S
|
S

I

F

Q

N

M
|
M

N

T

I

L

Q

T

E

E

L

L

G

S

T

S

A

A

T

V

Q

Q

Y

A

R

G

L

A

P

P

V

I

K

K

V

V

F

C

V

V

L

L

N

N

N
|
N

E

E

W
x
E

M
x
Q

G
|
G

M
|
M

V
|
V

R

T

Q

Q

W
|
W

Q

Q

E

S

L

L

T

F

Y

Y

E

E

S

H

R

R

Y

Y

S

S

N

H

S

T

Y

H

S

Q

D

-

S

S

L

N

P

P

D

D

F

F

V

M

K

K

L
|
L

A

A

E

E

A

S

Y

M

G
x
N

W
x
V

K

K

G

G

I

I

R

R

I

I

T

T

D

N

E

Q

S

Q

E

E

L

L

D

K

A

S

G

G

I

V

Q

K

A

E

M

F

I

L

D

D

H

A

D

T

G

E

P

P

V

V

F

L

V

L

D

E

C

V

L

I

V

V

A

E

K

K

E

K

A

V

N

P

C

V

F

L

P

P

M

M

I

V

P

P

S
x
A

G

G

A

K

A

A

H

L

T

D

D

D

M

F

I

I

L

L

Y

W

G

D

D

A

E

E

V

V

A

E

G

K

T

Q

M

Q

D

N

D

D

E

L

A

R

K

K

active site: Y33 (= Y26), G35 (= G28), G36 (= G29), A37 (= A30), I38 (≠ V31), E59 (= E52), T82 (= T75), F121 (= F114), Q122 (= Q115), E123 (= E116), K171 (= K164), K228 (≠ R225), M264 (= M261), V291 (= V288), V407 (= V395), L432 (= L420), G433 (= G421), M435 (= M423), D460 (= D448), N487 (= N475), E489 (≠ W477), Q490 (≠ M478), M492 (= M480), V493 (= V481), W496 (= W484), L518 (= L507), N523 (≠ G512), V524 (≠ W513)
binding methyl 2-[(4,6-dimethoxypyrimidin-2-yl)carbamoylsulfamoylmethyl]benzoate: M264 (= M261), D289 (= D286), R290 (= R287), M492 (= M480), W496 (= W484), A567 (≠ S556)
binding flavin-adenine dinucleotide: R161 (= R154), G217 (= G213), A218 (≠ G214), G219 (= G215), N222 (= N218), T244 (= T241), L245 (= L242), Q246 (≠ M243), L262 (= L259), G284 (= G281), A285 (= A282), R286 (= R283), D288 (= D285), R290 (= R287), V291 (= V288), E317 (≠ D305), I318 (= I306), N322 (≠ S310), D336 (= D324), V337 (= V328), M412 (= M400), G430 (= G418)
binding magnesium ion: D460 (= D448), N487 (= N475), E489 (≠ W477)
binding (3z)-4-{[(4-amino-2-methylpyrimidin-5-yl)methyl]amino}-3-mercaptopent-3-en-1-yl trihydrogen diphosphate: V407 (= V395), G408 (= G396), Q409 (= Q397), H410 (= H398), M435 (= M423), G459 (= G447), D460 (= D448), A461 (= A449), S462 (= S450), M465 (= M453), N487 (= N475), E489 (≠ W477), Q490 (≠ M478), G491 (= G479), M492 (= M480), V493 (= V481)

6delA Crystal structure of candida albicans acetohydroxyacid synthase in complex with the herbicide chlorimuron ethyl (see paper)
47% identity, 99% coverage: 6:579/582 of query aligns to 13:590/597 of 6delA

query
sites
6delA

S

T

G

G

A

G

E

E

I

I

L

F

V

H

E

E

S

M

L

M

V

L

A

R

K

H

G

K

V

V

E

D

F

T

V

V

F

F

G

G

Y
|
Y

P

A

G
|
G

A
|
A

V
x
I

L

L

P

P

I

V

Y

F

D

D

A

A

L

I

F

Y

G

N

D

S

E

D

R

K

L

F

R

K

H

F

I

V

L

L

V

P

R

R

H

H

E
|
E

A

Q

G

G

A

A

A

G

H

H

A

M

A

A

E

E

G

G

Y

Y

A

A

R

R

A

A

T

S

G

G

K

K

P

P

G

G

V

V

L

L

V

V

T
|
T

S

S

G

G

P

P

G

G

A

A

T

T

N

N

A

V

V

I

T

T

G

P

I

M

A

A

D

D

A

A

F

L

M

M

D

D

S

G

I

V

P

P

M

L

V

V

I

F

T

S

G

G

Q

Q

V

V

P

P

T

T

A

T

L

A

I

I

G

G

S

T

D

D

A

A

F
|
F

Q
|
Q

E
|
E

A

A

D

D

T

I

I

V

G

G

I

I

T

S

R

R

H

S

C

C

T

T

K

K

H

W

N

N

Y

V

L

M

V

V

K

K

D

N

P

V

S

A

Q

E

L

L

A

P

A

R

T

R

I

I

D

N

E

E

A

A

F

F

R

E

I

I

A

A

T

T

E

T

G

G

R
|
R

P

P

G

G

P

P

V

V

V

L

I

V

D

D

I

L

P

P

K
|
K

D

D

V

V

Q

-

I

-

A

-

T

T

A

A

A

S

W

I

S

L

S

R

A

E

A

S

P

I

Q

P

Q

I

R

N

N

T

R

T

Y

L

A

P

P

S

Q

V

T

S

E

E

G

F

G

T

A

S

K

E

E

A

I

I

A

K

E

R

A

A

I

A

E

N

L

I

I

L

A

N

K

K

A

A

K

K

A

K

P

P

V

I

F

I

Y

Y

T

A

G
|
G

G
x
A

G
|
G

V

I

I

L

N
|
N

A

-

G

N

P

E

E

Q

A

G

A

P

R
x
K

L

L

R

K

E

E

L

L

Q

A

S

D

L

K

T

A

G

N

A

I

P

P

V

V

T

T

S

T

T
|
T

L
|
L

M
x
Q

G

G

L

L

G

G

A

A

F

F

P

D

A

Q

D

R

H

D

P

P

A

K

W

S

L

L

G

D

M

M

L
|
L

G

G

M
|
M

H

H

G

G

T

S

Y

A

E

A

A

A

N

N

M

T

T

A

M

I

N

Q

R

N

A

A

D

D

L

C

V

I

C

A

I

L

G
|
G

A
|
A

R
|
R

F

F

D
|
D

R
|
R

V
|
V

T

T

G

G

R

N

L

I

D

S

A

K

F

F

S

A

P

P

N

E

S

A

K

K

K

L

-

A

-

S

-

E

-

G

-

R

-

G

-

I

I

L

H

H

I

F

D
x
E

I
|
I

D

S

R

P

A

K

S
x
N

I

I

N

N

K

K

T

V

V

V

Q

E

V

A

D

T

L

E

P

A

V

I

I

E

G

G

D
|
D

C

-

G

-

K

-

V
|
V

L

T

A

A

Q

N

L

L

I

-

E

Q

A

S

W

F

L

I

E

P

R

L

G

V

Y

D

Q

S

K

I

Q

E

D

N

L

R

T

P

E

E

W

W

N

F

A

N

R

K

I

I

D

N

G

E

W

W

R

K

A

K

R

K

Q

Y

S

P

L

Y

A

S

F

Y

P

Q

R

L

R

E

-

T

-

P

G

G

K

S

E

L

I

I

M

K

P

P

Q

Q

L

T

A

L

I

I

E

K

R

E

L

I

Y

S

E

D

-

Q

-

A

L

Q

T

T

R

Y

H

N

K

K

E

E

P

V

I

I

I

V

S

T

T

T

E

G

V
|
V

G
|
G

Q
|
Q

H
|
H

Q

Q

M
|
M

W

W

A

A

Q

Q

H

H

F

F

H

T

F

W

M

T

K

Q

P

P

N

R

K

T

W

M

L

I

T

T

S

S

G
|
G

G

G

L
|
L

G
|
G

T

T

M
|
M

G

G

Y

Y

G

G

L

L

P

P

A

A

I

I

G

G

A

A

Q

Q

A

V

G

A

F

K

P

P

D

D

A

A

L

I

V

V

I

I

D

D

I

I

A

D

G
|
G

D
|
D

A
|
A

S
|
S

I

F

Q

N

M
|
M

N

T

I

L

Q

T

E

E

L

L

G

S

T

S

A

A

T

V

Q

Q

Y

A

R

G

L

A

P

P

V

I

K

K

V

V

F

C

V

V

L

L

N

N

N
|
N

E

E

W
x
E

M
x
Q

G
|
G

M
|
M

V
|
V

R

T

Q

Q

W
|
W

Q

Q

E

S

L

L

T

F

Y

Y

E

E

S

H

R

R

Y

Y

S

S

N

H

S

T

Y

H

S

Q

D

-

S

S

L

N

P

P

D

D

F

F

V

M

K

K

L
|
L

A

A

E

E

A

S

Y

M

G
x
N

W
x
V

K

K

G

G

I

I

R

R

I

I

T

T

D

N

E

Q

S

Q

E

E

L

L

D

K

A

S

G

G

I

V

Q

K

A

E

M

F

I

L

D

D

H

A

D

T

G

E

P

P

V

V

F

L

V

L

D

E

C

V

L

I

V

V

A

E

K

K

E

K

A

V

N

P

C

V

F

L

P

P

M

M

I

V

P

P

S

A

G

G

A

K

A

A

H

L

T

D

D

D

M

F

I

I

L

L

Y

W

G

D

D

A

E

E

V

V

A

E

G

K

T

Q

M

Q

D

N

D

D

E

L

A

R

K

K

active site: Y33 (= Y26), G35 (= G28), G36 (= G29), A37 (= A30), I38 (≠ V31), E59 (= E52), T82 (= T75), F121 (= F114), Q122 (= Q115), E123 (= E116), K171 (= K164), K228 (≠ R225), M264 (= M261), V291 (= V288), V407 (= V395), L432 (= L420), G433 (= G421), M435 (= M423), D460 (= D448), N487 (= N475), E489 (≠ W477), Q490 (≠ M478), M492 (= M480), V493 (= V481), W496 (= W484), L518 (= L507), N523 (≠ G512), V524 (≠ W513)
binding 2-[[[[(4-chloro-6-methoxy-2-pyrimidinyl)amino]carbonyl]amino]sulfonyl]benzoic acid ethyl ester: D289 (= D286), R290 (= R287), W496 (= W484)
binding flavin-adenine dinucleotide: R161 (= R154), G217 (= G213), A218 (≠ G214), G219 (= G215), N222 (= N218), T244 (= T241), L245 (= L242), Q246 (≠ M243), L262 (= L259), G284 (= G281), A285 (= A282), R286 (= R283), D288 (= D285), R290 (= R287), V291 (= V288), E317 (≠ D305), I318 (= I306), N322 (≠ S310), D336 (= D324), V337 (= V328), M412 (= M400), G430 (= G418)
binding (3Z)-4-{[(4-amino-2-methylpyrimidin-5-yl)methyl](formyl)amino}-3-sulfanylpent-3-en-1-yl trihydrogen diphosphate: V407 (= V395), G408 (= G396), Q409 (= Q397), H410 (= H398), G433 (= G421), M435 (= M423), G459 (= G447), D460 (= D448), A461 (= A449), S462 (= S450), M465 (= M453), N487 (= N475), E489 (≠ W477), Q490 (≠ M478), G491 (= G479), M492 (= M480), V493 (= V481)
binding magnesium ion: D460 (= D448), N487 (= N475), E489 (≠ W477)
binding (3z)-4-{[(4-amino-2-methylpyrimidin-5-yl)methyl]amino}-3-mercaptopent-3-en-1-yl trihydrogen diphosphate: V407 (= V395), G408 (= G396), Q409 (= Q397), H410 (= H398), G433 (= G421), M435 (= M423), G459 (= G447), D460 (= D448), A461 (= A449), S462 (= S450), M465 (= M453), N487 (= N475), E489 (≠ W477), Q490 (≠ M478), G491 (= G479), M492 (= M480), V493 (= V481)

6denA Crystal structure of candida albicans acetohydroxyacid synthase in complex with the herbicide iodomuron ethyl (see paper)
47% identity, 99% coverage: 6:579/582 of query aligns to 15:592/599 of 6denA

query
sites
6denA

S

T

G

G

A

G

E

E

I

I

L

F

V

H

E

E

S

M

L

M

V

L

A

R

K

H

G

K

V

V

E

D

F

T

V

V

F

F

G

G

Y
|
Y

P

A

G
|
G

A
|
A

V
x
I

L

L

P

P

I

V

Y

F

D

D

A

A

L

I

F

Y

G

N

D

S

E

D

R

K

L

F

R

K

H

F

I

V

L

L

V

P

R

R

H

H

E
|
E

A

Q

G

G

A

A

A

G

H

H

A

M

A

A

E

E

G

G

Y

Y

A

A

R

R

A

A

T

S

G

G

K

K

P

P

G

G

V

V

L

L

V

V

T
|
T

S

S

G

G

P

P

G

G

A

A

T

T

N

N

A

V

V

I

T

T

G

P

I

M

A

A

D

D

A

A

F

L

M

M

D

D

S

G

I

V

P

P

M

L

V

V

I

F

T

S

G

G

Q

Q

V

V

P

P

T

T

A

T

L

A

I

I

G

G

S

T

D

D

A

A

F
|
F

Q
|
Q

E
|
E

A

A

D

D

T

I

I

V

G

G

I

I

T

S

R

R

H

S

C

C

T

T

K

K

H

W

N

N

Y

V

L

M

V

V

K

K

D

N

P

V

S

A

Q

E

L

L

A

P

A

R

T

R

I

I

D

N

E

E

A

A

F

F

R

E

I

I

A

A

T

T

E

T

G

G

R
|
R

P

P

G

G

P

P

V

V

V

L

I

V

D

D

I

L

P

P

K
|
K

D

D

V

V

Q

-

I

-

A

-

T

T

A

A

A

S

W

I

S

L

S

R

A

E

A

S

P

I

Q

P

Q

I

R

N

N

T

R

T

Y

L

A

P

P

A

Q

V

T

S

E

E

G

F

G

T

A

S

K

E

E

A

I

I

A

K

E

R

A

A

I

A

E

N

L

I

I

L

A

N

K

K

A

A

K

K

A

K

P

P

V

I

F

I

Y

Y

T

A

G
|
G

G
x
A

G
|
G

V

I

I

L

N
|
N

A

-

G

N

P

E

E

Q

A

G

A

P

R
x
K

L

L

R

K

E

E

L

L

Q

A

S

D

L

K

T

A

G

N

A

I

P

P

V

V

T

T

S

T

T
|
T

L
|
L

M
x
Q

G

G

L

L

G

G

A

A

F

F

P

D

A

Q

D

R

H

D

P

P

A

K

W

S

L

L

G

D

M

M

L
|
L

G

G

M
|
M

H

H

G

G

T

S

Y

A

E

A

A

A

N

N

M

T

T

A

M

I

N

Q

R

N

A

A

D

D

L

C

V

I

C

A

I

L

G
|
G

A
|
A

R
|
R

F

F

D
|
D

R
|
R

V
|
V

T

T

G

G

R

N

L

I

D

S

A

K

F

F

S

A

P

P

N

E

S

A

K

K

K

L

-

A

-

S

-

E

-

G

-

R

-

G

-

I

I

L

H

H

I

F

D
x
E

I
|
I

D

S

R

P

A

K

S
x
N

I

I

N

N

K

K

T

V

V

V

Q

E

V

A

D

T

L

E

P

A

V

I

I

E

G

G

D
|
D

C

-

G

-

K

-

V
|
V

L

T

A

A

Q

N

L

L

I

-

E

Q

A

S

W

F

L

I

E

P

R

L

G

V

Y

D

Q

S

K

I

Q

E

D

N

L

R

T

P

E

E

W

W

N

F

A

N

R

K

I

I

D

N

G

E

W

W

R

K

A

K

R

K

Q

Y

S

P

L

Y

A

S

F

Y

P

Q

R

L

R

E

-

T

-

P

G

G

K

S

E

L

I

I

M

K

P

P

Q

Q

L

T

A

L

I

I

E

K

R

E

L

I

Y

S

E

D

-

Q

-

A

L

Q

T

T

R

Y

H

N

K

K

E

E

P

V

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I

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V

G
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G

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H

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M

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W

A

A

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H

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F

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-

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L

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x
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K

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G

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R

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active site: Y35 (= Y26), G37 (= G28), G38 (= G29), A39 (= A30), I40 (≠ V31), E61 (= E52), T84 (= T75), F123 (= F114), Q124 (= Q115), E125 (= E116), K173 (= K164), K230 (≠ R225), M266 (= M261), V293 (= V288), V409 (= V395), L434 (= L420), G435 (= G421), M437 (= M423), D462 (= D448), N489 (= N475), E491 (≠ W477), Q492 (≠ M478), M494 (= M480), V495 (= V481), W498 (= W484), L520 (= L507), N525 (≠ G512), V526 (≠ W513)
binding flavin-adenine dinucleotide: R163 (= R154), G219 (= G213), A220 (≠ G214), G221 (= G215), N224 (= N218), T246 (= T241), L247 (= L242), Q248 (≠ M243), L264 (= L259), G286 (= G281), A287 (= A282), R288 (= R283), D290 (= D285), R292 (= R287), V293 (= V288), E319 (≠ D305), I320 (= I306), N324 (≠ S310), D338 (= D324), V339 (= V328), M414 (= M400), G432 (= G418)
binding ethyl 2-{[(4-iodo-6-methoxypyrimidin-2-yl)carbamoyl]sulfamoyl}benzoate: M266 (= M261), D291 (= D286), R292 (= R287), W498 (= W484)
binding magnesium ion: D462 (= D448), N489 (= N475), E491 (≠ W477)
binding (3z)-4-{[(4-amino-2-methylpyrimidin-5-yl)methyl]amino}-3-mercaptopent-3-en-1-yl trihydrogen diphosphate: V409 (= V395), G410 (= G396), Q411 (= Q397), H412 (= H398), G435 (= G421), M437 (= M423), G461 (= G447), D462 (= D448), A463 (= A449), S464 (= S450), N489 (= N475), E491 (≠ W477), Q492 (≠ M478), G493 (= G479), M494 (= M480), V495 (= V481)

6deoA Crystal structure of candida albicans acetohydroxyacid synthase in complex with the herbicide iodomuron methyl (see paper)
47% identity, 99% coverage: 6:579/582 of query aligns to 11:586/593 of 6deoA

query
sites
6deoA

S

T

G

G

A

G

E

E

I

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M

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K

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Y

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A
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L

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A

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G

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G

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G

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G

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G

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G

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