Comparing WP_011604374.1 NCBI__GCF_000058485.1:WP_011604374.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 8 hits to proteins with known functional sites (download)
3mwbA The crystal structure of prephenate dehydratase in complex with l-phe from arthrobacter aurescens to 2.0a
51% identity, 96% coverage: 7:307/314 of query aligns to 3:306/306 of 3mwbA
3mwbB The crystal structure of prephenate dehydratase in complex with l-phe from arthrobacter aurescens to 2.0a
50% identity, 96% coverage: 7:307/314 of query aligns to 3:303/303 of 3mwbB
2qmxA The crystal structure of l-phe inhibited prephenate dehydratase from chlorobium tepidum tls (see paper)
31% identity, 85% coverage: 9:275/314 of query aligns to 6:273/278 of 2qmxA
6vh5D Crystal structure of prephenate dehydratase from brucella melitensis biovar abortus 2308 in complex with phenylalanine
33% identity, 87% coverage: 6:279/314 of query aligns to 8:280/282 of 6vh5D
P0A9J8 Bifunctional chorismate mutase/prephenate dehydratase; Chorismate mutase-prephenate dehydratase; P-protein; EC 5.4.99.5; EC 4.2.1.51 from Escherichia coli (strain K12)
31% identity, 88% coverage: 2:276/314 of query aligns to 101:376/386 of P0A9J8
Sites not aligning to the query:
3luyA Putative chorismate mutase from bifidobacterium adolescentis
30% identity, 90% coverage: 6:287/314 of query aligns to 5:295/326 of 3luyA
7am0B Gqqa- a novel type of quorum quenching acylases (see paper)
32% identity, 78% coverage: 33:276/314 of query aligns to 28:270/278 of 7am0B
7alzA Gqqa- a novel type of quorum quenching acylases (see paper)
28% identity, 43% coverage: 142:276/314 of query aligns to 41:186/194 of 7alzA
>WP_011604374.1 NCBI__GCF_000058485.1:WP_011604374.1
MPAQARYTYLGPEGTFSEAALQTLPEAATGELVPSASVTAALDAVRSGDAAGALVPIENS
VEGAVTTTLDELATGSPLMIYREVLLPISFALLVRPGTTLEDVKTVTGHPVAQAQVRRWL
AANLPHAEWESAASNAEGARLVRDGRFDCAFAGEFAGRLYGLEALVTDINDAADATTRFV
LLGRPGRIAAPTRADKTSAVAWLAENHPGALLELLQQWAVRGVNLMRIESRPTGEGLGQY
CFSLDAEGHASDRRVGEALMGLYRICPKVRFLGSYPRADGLAPSVRSQESDREFTAAADW
LTRCLDGHGDEREP
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory