Comparing WP_011607042.1 NCBI__GCF_000058485.1:WP_011607042.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 2 hits to proteins with known functional sites (download)
4ymtC Crystal structure of an amino acid abc transporter complex with arginines (see paper)
38% identity, 64% coverage: 105:318/333 of query aligns to 16:215/215 of 4ymtC
4ymwC Crystal structure of an amino acid abc transporter with histidines (see paper)
39% identity, 66% coverage: 105:323/333 of query aligns to 16:212/214 of 4ymwC
>WP_011607042.1 NCBI__GCF_000058485.1:WP_011607042.1
MTAADAPPPGAPPPGAPPPPPGAAPTAEPALAAEPALAAEAAPAAEAAPPVAGGDVDAVP
LRHPGRWAAGVVILVLAAMGVHSLVTNPHFQWGTVGDYLFAEPVLRGLWATVYLTVIAMA
IGIVGGIVLAILRMSPNPVVAGAAWLYIWFFRGTPLLVQILFWSFVGALYPRLSLGIPFG
PSFVSGDANHIVPLFAAAVLGLGLNEAAYMAEIVRAGINGVDAGQTEAASALGMSRALAL
RRIVLPQAMRTIIPPTGNETISMLKTTSLVSVISYNELLNATRIVYARTFQTIPLLIVAA
LWYLALTSVLTLGQHQLERRFARGTLPGAGDRR
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory