Comparing WP_011649778.1 NCBI__GCF_000009265.1:WP_011649778.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
1ji0A Crystal structure analysis of the abc transporter from thermotoga maritima
40% identity, 95% coverage: 4:232/240 of query aligns to 6:239/240 of 1ji0A
6mjpA Lptb(e163q)fgc from vibrio cholerae (see paper)
32% identity, 95% coverage: 3:230/240 of query aligns to 1:234/240 of 6mjpA
6s8nB Cryo-em structure of lptb2fgc in complex with lipopolysaccharide (see paper)
33% identity, 95% coverage: 3:230/240 of query aligns to 1:234/238 of 6s8nB
6s8gA Cryo-em structure of lptb2fgc in complex with amp-pnp (see paper)
33% identity, 95% coverage: 3:230/240 of query aligns to 1:234/238 of 6s8gA
6b89A E. Coli lptb in complex with adp and novobiocin (see paper)
33% identity, 95% coverage: 3:230/240 of query aligns to 1:234/234 of 6b89A
4p31A Crystal structure of a selenomethionine derivative of e. Coli lptb in complex with adp-magensium (see paper)
33% identity, 95% coverage: 3:230/240 of query aligns to 1:234/234 of 4p31A
6mhzA Vanadate trapped cryo-em structure of e.Coli lptb2fg transporter (see paper)
33% identity, 95% coverage: 3:230/240 of query aligns to 1:234/235 of 6mhzA
6mbnA Lptb e163q in complex with atp (see paper)
32% identity, 95% coverage: 2:230/240 of query aligns to 1:235/241 of 6mbnA
6b8bA E. Coli lptb in complex with adp and a novobiocin derivative (see paper)
33% identity, 93% coverage: 3:225/240 of query aligns to 1:229/233 of 6b8bA
1g6hA Crystal structure of the adp conformation of mj1267, an atp-binding cassette of an abc transporter (see paper)
28% identity, 95% coverage: 4:230/240 of query aligns to 4:252/254 of 1g6hA
1g9xB Characterization of the twinning structure of mj1267, an atp-binding cassette of an abc transporter (see paper)
28% identity, 95% coverage: 4:230/240 of query aligns to 4:252/253 of 1g9xB
4u00A Crystal structure of ttha1159 in complex with adp (see paper)
31% identity, 94% coverage: 4:228/240 of query aligns to 2:226/241 of 4u00A
P04983 Ribose import ATP-binding protein RbsA; EC 7.5.2.7 from Escherichia coli (strain K12) (see paper)
28% identity, 94% coverage: 1:225/240 of query aligns to 1:234/501 of P04983
P9WQK5 Uncharacterized ABC transporter ATP-binding protein Rv0073 from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) (see paper)
33% identity, 84% coverage: 5:205/240 of query aligns to 9:215/330 of P9WQK5
Q8IUA7 ATP-binding cassette sub-family A member 9; EC 7.6.2.- from Homo sapiens (Human) (see 2 papers)
32% identity, 88% coverage: 5:216/240 of query aligns to 481:700/1624 of Q8IUA7
Sites not aligning to the query:
3c4jA Abc protein artp in complex with atp-gamma-s
25% identity, 94% coverage: 4:228/240 of query aligns to 3:228/242 of 3c4jA
3c41J Abc protein artp in complex with amp-pnp/mg2+
25% identity, 94% coverage: 4:228/240 of query aligns to 3:228/242 of 3c41J
2olkA Abc protein artp in complex with adp-beta-s
25% identity, 94% coverage: 4:228/240 of query aligns to 3:228/242 of 2olkA
2oljA Abc protein artp in complex with adp/mg2+
25% identity, 94% coverage: 4:228/240 of query aligns to 3:228/242 of 2oljA
Q61102 Iron-sulfur clusters transporter ABCB7, mitochondrial; ATP-binding cassette sub-family B member 7, mitochondrial; ATP-binding cassette transporter 7; ABC transporter 7 protein from Mus musculus (Mouse) (see paper)
30% identity, 93% coverage: 2:223/240 of query aligns to 469:697/752 of Q61102
Sites not aligning to the query:
>WP_011649778.1 NCBI__GCF_000009265.1:WP_011649778.1
MTALLRIDRLVSGYGEARVLGGVSFELDEGRSLSLLGRNGAGKTTLVDTIVGVTTHHSGT
ISFAGVDLTRTRPERRAAAGIGWVPQERNIFRSLTVEENLTAIARPGPWSVERVYSMFPR
LKERRFNRGNQLSGGEQQMLALGRALMLNPRLLLLDEPLEGLAPIIVDELLAALRKIIDG
EGMSAIIIEQKARKILPLTDRTVVLERGLVSYAGESAPLLADSEIFDRYLALGDHKAATA
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory