Comparing WP_011652070.1 NCBI__GCF_000009265.1:WP_011652070.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
P27876 Triosephosphate isomerase; TIM; TPI; Triose-phosphate isomerase; EC 5.3.1.1 from Bacillus subtilis (strain 168) (see paper)
43% identity, 95% coverage: 6:247/256 of query aligns to 3:246/253 of P27876
P00942 Triosephosphate isomerase; TIM; Triose-phosphate isomerase; EC 5.3.1.1 from Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) (see 2 papers)
42% identity, 91% coverage: 8:240/256 of query aligns to 6:237/248 of P00942
Sites not aligning to the query:
6neeB Crystal structure of a reconstructed ancestor of triosephosphate isomerase from eukaryotes (see paper)
41% identity, 96% coverage: 8:252/256 of query aligns to 7:252/252 of 6neeB
3ypiA Electrophilic catalysis in triosephosphase isomerase: the role of histidine-95 (see paper)
42% identity, 91% coverage: 8:240/256 of query aligns to 5:236/247 of 3ypiA
4ff7B Structure of c126s mutant of saccharomyces cerevisiae triosephosphate isomerase (see paper)
42% identity, 91% coverage: 8:240/256 of query aligns to 5:236/247 of 4ff7B
4ff7A Structure of c126s mutant of saccharomyces cerevisiae triosephosphate isomerase (see paper)
42% identity, 91% coverage: 8:240/256 of query aligns to 5:236/247 of 4ff7A
3uwvA Crystal structure of staphylococcus aureus triosephosphate isomerase complexed with 2-phosphoglyceric acid (see paper)
43% identity, 94% coverage: 7:247/256 of query aligns to 6:250/255 of 3uwvA
3uwzA Crystal structure of staphylococcus aureus triosephosphate isomerase complexed with glycerol-2-phosphate (see paper)
43% identity, 94% coverage: 7:247/256 of query aligns to 5:249/254 of 3uwzA
3uwwA Crystal structure of staphylococcus aureus triosephosphate isomerase complexed with 3-phosphoglyceric acid (see paper)
43% identity, 94% coverage: 7:247/256 of query aligns to 5:249/254 of 3uwwA
3uwuA Crystal structure of staphylococcus aureus triosephosphate isomerase complexed with glycerol-3-phosphate (see paper)
43% identity, 94% coverage: 7:247/256 of query aligns to 4:248/253 of 3uwuA
Q6GIL6 Triosephosphate isomerase; TIM; TPI; Triose-phosphate isomerase; EC 5.3.1.1 from Staphylococcus aureus (strain MRSA252) (see paper)
43% identity, 94% coverage: 7:247/256 of query aligns to 4:248/253 of Q6GIL6
A0A1L5YRA2 Triosephosphate isomerase; TIM; Allergen Scy p 8; Methylglyoxal synthase; Triose-phosphate isomerase; Allergen Scy p 8.0101; EC 5.3.1.1; EC 4.2.3.3 from Scylla paramamosain (Mud crab) (see paper)
40% identity, 98% coverage: 1:250/256 of query aligns to 1:246/248 of A0A1L5YRA2
P00943 Triosephosphate isomerase; TIM; TPI; Triose-phosphate isomerase; EC 5.3.1.1 from Geobacillus stearothermophilus (Bacillus stearothermophilus) (see 2 papers)
42% identity, 96% coverage: 6:250/256 of query aligns to 3:249/253 of P00943
1btmA Triosephosphate isomerase (tim) complexed with 2-phosphoglycolic acid (see paper)
42% identity, 96% coverage: 6:250/256 of query aligns to 2:248/251 of 1btmA
4mvaA 1.43 angstrom resolution crystal structure of triosephosphate isomerase (tpia) from escherichia coli in complex with acetyl phosphate. (see paper)
41% identity, 97% coverage: 6:253/256 of query aligns to 3:251/255 of 4mvaA
B1XB85 Triosephosphate isomerase; TIM; TPI; Triose-phosphate isomerase; EC 5.3.1.1 from Escherichia coli (strain K12 / DH10B) (see paper)
41% identity, 97% coverage: 6:253/256 of query aligns to 3:251/255 of B1XB85
3uwzB Crystal structure of staphylococcus aureus triosephosphate isomerase complexed with glycerol-2-phosphate (see paper)
42% identity, 94% coverage: 7:247/256 of query aligns to 4:245/250 of 3uwzB
4y96A Crystal structure of triosephosphate isomerase from gemmata obscuriglobus (see paper)
40% identity, 96% coverage: 6:250/256 of query aligns to 3:248/250 of 4y96A
6ooiC Crystal structure of triosephosphate isomerase from schistosoma mansoni in complex with 2pg (see paper)
40% identity, 98% coverage: 1:252/256 of query aligns to 4:255/255 of 6ooiC
P00939 Triosephosphate isomerase; TIM; Methylglyoxal synthase; Triose-phosphate isomerase; EC 5.3.1.1; EC 4.2.3.3 from Oryctolagus cuniculus (Rabbit) (see 2 papers)
38% identity, 98% coverage: 1:252/256 of query aligns to 1:249/249 of P00939
>WP_011652070.1 NCBI__GCF_000009265.1:WP_011652070.1
MTPDVRPLVAGNWKMNGMRASLDQIKTIAEGVRPPLADKVEALICPPATLLYVATALCTD
SPLAIGAQDCHQNPSGAHTGDISAEMIADCFGTYVIVGHSERRTDHAETDHLVRAKAEAA
FAAGLTAIICIGETADERRTGQALDVIKRQLSASVPDCATAESTVIAYEPIWAIGTGVTP
TSGDVEKAHAFMRAELAVRFGDEGRKMRLLYGGSVKPANAHELMGIANVDGALIGGASLK
AADFLAIYRAYEALLA
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory