Comparing WP_011653613.1 NCBI__GCF_000009265.1:WP_011653613.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures
Found 2 hits to proteins with known functional sites (download)
P94530 Arabinooligosaccharides transport system permease protein AraQ from Bacillus subtilis (strain 168) (see paper)
27% identity, 97% coverage: 10:276/276 of query aligns to 12:280/281 of P94530
P68183 Maltose/maltodextrin transport system permease protein MalG from Escherichia coli (strain K12) (see 2 papers)
30% identity, 100% coverage: 1:276/276 of query aligns to 3:295/296 of P68183
>WP_011653613.1 NCBI__GCF_000009265.1:WP_011653613.1
MARKVTTKRKLIVTAIAWTLGILIFFPILWTFLTSFKSEADAIASPPQFLFFHWTTENYA
EVQSRSNYLGHFMNSVVISFGSTLIGLIIAIPAAWAMAFSPTKRTKDVLMWMLSTKMMPP
VGALIPIYLMFRNFGLLDTRTGLVIVLTLINLPIIVWMLYTYFKEIPGEILEAARMDGAS
LMKEIVYVLTPMAVPGIASTLLLNIILAWNEAFWTLNLTASKAAPLTAFIASYSSPEGLF
YAKLSAASTMAIAPILILGWFSQKQLVRGLTFGAVK
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory