Comparing WP_011653664.1 NCBI__GCF_000009265.1:WP_011653664.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 11 hits to proteins with known functional sites (download)
Q9M8R4 Protein DJ-1 homolog D; AtDJ1D; Lactoylglutathione lyase DJ1D; EC 4.4.1.5 from Arabidopsis thaliana (Mouse-ear cress) (see 2 papers)
59% identity, 93% coverage: 4:187/198 of query aligns to 198:382/388 of Q9M8R4
Sites not aligning to the query:
6f2fC Crystal structure of protease 1 from pyrococcus horikoshii co- cystallized in presence of 10 mm tb-xo4 and ammonium sulfate. (see paper)
37% identity, 92% coverage: 5:187/198 of query aligns to 2:165/166 of 6f2fC
6f2fA Crystal structure of protease 1 from pyrococcus horikoshii co- cystallized in presence of 10 mm tb-xo4 and ammonium sulfate. (see paper)
37% identity, 92% coverage: 5:187/198 of query aligns to 2:165/166 of 6f2fA
2vrnA The structure of the stress response protein dr1199 from deinococcus radiodurans: a member of the dj-1 superfamily (see paper)
32% identity, 86% coverage: 1:170/198 of query aligns to 2:158/185 of 2vrnA
Sites not aligning to the query:
P45470 Protein/nucleic acid deglycase 2; Maillard deglycase; EC 3.1.2.-; EC 3.5.1.-; EC 3.5.1.124 from Escherichia coli (strain K12) (see 2 papers)
31% identity, 94% coverage: 3:189/198 of query aligns to 2:172/172 of P45470
Sites not aligning to the query:
Q9VA37 Protein dj-1beta from Drosophila melanogaster (Fruit fly) (see 2 papers)
25% identity, 83% coverage: 7:170/198 of query aligns to 6:152/187 of Q9VA37
4d1yA Crystal structure of a putative protease from bacteroides thetaiotaomicron. (see paper)
26% identity, 52% coverage: 79:181/198 of query aligns to 65:172/175 of 4d1yA
Q8A8A4 Protein ppBat; Putative protease; ppBat from Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / JCM 5827 / CCUG 10774 / NCTC 10582 / VPI-5482 / E50) (see 2 papers)
26% identity, 52% coverage: 79:181/198 of query aligns to 65:172/175 of Q8A8A4
3cneC Crystal structure of the putative protease i from bacteroides thetaiotaomicron
26% identity, 52% coverage: 79:181/198 of query aligns to 64:171/174 of 3cneC
Sites not aligning to the query:
3cneA Crystal structure of the putative protease i from bacteroides thetaiotaomicron
26% identity, 52% coverage: 79:181/198 of query aligns to 64:171/174 of 3cneA
Sites not aligning to the query:
6undB Pseudomonas fluorescens isocyanide hydratase thioimidate intermediate at 298 k xfel data (see paper)
30% identity, 53% coverage: 66:169/198 of query aligns to 51:151/230 of 6undB
Sites not aligning to the query:
>WP_011653664.1 NCBI__GCF_000009265.1:WP_011653664.1
MPASKILMITGDFTEDYETMVPFQTLLACGYTVDAVCPGKNAGETVATAIHDFEGDQTYS
EKRGHNFALNATFGSVRAEDYDALVIPGGRAPEYLRLNADVLKFVRHFFDAGKPVAAICH
GAQLLAAAGVLKGRTCSAYPACRPEVELAGGIYADIAISDAVSDGNLVTAPAWPAHPSWL
RQFMAVLDAAALLETNAA
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory