SitesBLAST

P9WQI3 Trehalose import ATP-binding protein SugC; MtbSugC; Nucleotide-binding domain of SugABC transporter; NBD of SugABC transporter; SugABC transporter ATPase SugC; EC 7.5.2.- from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) (see paper)
39% identity, 82% coverage: 3:213/257 of query aligns to 1:210/393 of P9WQI3

query
sites
P9WQI3

M

M

P

A

A

E

I

I

R

V

F

L

D

D

R

H

L

V

G

N

Q

K

V

S

F

Y

E

P

T

-

R

-

S

D

G

G

R

H

T

T

E

-

A

A

L

V

R

R

D

D

V

L

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N

F

L

D

T

V

I

A

A

R

D

H

G

E

E

F

F

V

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S

I

I

L

L

V

G

G

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P

S

S

G

G

C

C

G

G

K

K

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T

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T

L

T

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L

R

N

M

M

I

I

A

A

G

G

L

L

L

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K

D

P

I

T

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S

S

G

G

S

E

V

L

D

R

V

I

F

A

A

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L

E

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R

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T

N

-

E

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K

A

A

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P

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D

D

-

R

D

D

I

I

G

A

I

M

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F

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Y

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A

L

L

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Y

P

P

W

H

A

M

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T

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N

N

V

I

V

A

F

F

P

P

A

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M

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T

K

A

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M

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M

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M

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M

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H

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D

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T

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E

A

A

A

M

L

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L

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M

M

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Y

G

G

H193 (= H196) mutation to A: Decreased hydrolysis of ATP. No change in KM, but 2-fold reduction in Vmax compared to wild-type.

1l2tA Dimeric structure of mj0796, a bacterial abc transporter cassette (see paper)
42% identity, 73% coverage: 24:211/257 of query aligns to 20:218/230 of 1l2tA

query
sites
1l2tA

A

A

L

L

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K

D

N

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S
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S

G
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G

C
x
S

G
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G

K
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K

S
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S

T
|
T

L

M

L

L

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N

M

I

I

I

A

G

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C

L

L

L

D

K

K

P

P

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E

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E

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D

Y

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A

N

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N

-

D

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L

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D

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E

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L

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K

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I

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W

L

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N

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Y

-

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R

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L

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C

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M

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E

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F
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F

E

A

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N

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P

P

D

N

E
x
Q

L

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S
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S

G

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G
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G

M
x
Q

Q

Q

R

R

V

V

G

A

I

I

A

A

R

R

A

A

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L

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M

N

D

N

P

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K

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H

S

D

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I

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N

E

-

A

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L

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E

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Y

M

L

binding adenosine-5'-triphosphate: S40 (= S44), G41 (= G45), S42 (≠ C46), G43 (= G47), K44 (= K48), S45 (= S49), T46 (= T50), F138 (= F130), Q145 (≠ E137), S147 (= S139), G149 (= G141), Q150 (≠ M142), H204 (= H196)

Sites not aligning to the query:

binding adenosine-5'-triphosphate: 11

1vciA Crystal structure of the atp-binding cassette of multisugar transporter from pyrococcus horikoshii ot3 complexed with atp (see paper)
41% identity, 76% coverage: 18:212/257 of query aligns to 15:203/353 of 1vciA

query
sites
1vciA

R

R

S
x
F

G

G

R

N

T
x
F

E

T

A

A

L

V

R

N

D

K

V

L

S

N

F

L

D

T

V

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A

K

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D

H

G

E

E

F

F

V

L

S

V

I

L

L

L

G

G

P

P

S
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S

G
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G

C

C

G
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G

K
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K

S
x
T

T
|
T

L

T

L

L

R

R

M

M

I

I

A

A

G

G

L

L

L

E

K

E

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P

T

T

S

E

G

G

S

R

V

I

-

Y

-

F

-

G

-

D

-

R

D

D

V

V

F

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A

Y

L

L

P

P

V

-

T

-

A

-

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P

R

K

D

D

-

R

D

N

I

I

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I

M

V

V

F

F

Q

Q

K

H

P

-

T

-

L

-

P

-

W

-

A

M

T

T

V

V

E

Y

D

E

N

N

V

I

V

A

F

F

P

P

A

L

R

K

H

-

K

K

T

F

G

P

R

K

V

D

T

E

A

I

E

D

E

K

R

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G

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R

R

-

W

A

A

G

A

E

E

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L

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Q

M

I

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E

G

E

L

L

A

L

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N

F

-

E

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K

-

R

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Y

P

P

D

A

E

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L

L

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S

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G

M

Q

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Q

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V

G

A

I

V

A

A

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R

A

A

L

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M

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E

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P

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I

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M

M

D

D

E

E

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A

N

L

L

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D

A

A

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L

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A

M

M

G

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A

D

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L

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K

I

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F

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S

Q

E

K

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K

K

V

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T

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Y

I

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T

H

H

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Q

S

V

E

E

A

A

A

M

L

T

L

M

S

G

D

D

R

R

V

I

L

A

V

V

M

M

T

N

binding adenosine-5'-triphosphate: F16 (≠ S19), F19 (≠ T22), S41 (= S44), G42 (= G45), G44 (= G47), K45 (= K48), T46 (≠ S49), T47 (= T50)

8hplC Lpqy-sugabc in state 1 (see paper)
41% identity, 76% coverage: 17:211/257 of query aligns to 9:205/384 of 8hplC

query
sites
8hplC

T

T

R

K

S

S

G
x
Y

R

P

T

R

E

A

A

A

L

V

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M

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G

P

P

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S

G
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G

C
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C

G
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G

K
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K

S
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S

T
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T

L

T

L

L

R

N

M

M

I

I

A

A

G

G

L

L

L

E

K

E

P

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G

S

E

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L

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I

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G

A

G

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E

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R

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N

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E

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K

A

A

P

P

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D

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D

D

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A

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M

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T

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Q

N

N

V

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F

F

P

P

A

L

R

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H

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K

T

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A

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V

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P

T

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A

A

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E

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A

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A

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A

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P

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E

Q

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M

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A

I

M

A

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R

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A

A

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P

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K

I

A

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F

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M

D

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E

Q

P

P

F

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S

S

A

N

L

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D

D

A

A

L

K

T

L

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R

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Q

M

M

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R

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A

D

E

L

I

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I

L

F

Q

S

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E

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R

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P

G

K

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T

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T

V

V

F

Y

I

V

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T

H

H

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D

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Q

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T

E

E

A

A

A

M

L

T

L

L

S

G

D

D

R

R

V

V

L

V

V

V

M

M

binding adenosine-5'-triphosphate: Y12 (≠ G20), G37 (= G45), C38 (= C46), G39 (= G47), K40 (= K48), S41 (= S49), T42 (= T50)

P69874 Spermidine/putrescine import ATP-binding protein PotA; EC 7.6.2.11 from Escherichia coli (strain K12) (see 3 papers)
43% identity, 76% coverage: 23:218/257 of query aligns to 31:226/378 of P69874

query
sites
P69874

E

E

A

V

L

I

R

P

D

Q

V

L

S

D

F

L

D

T

V

I

A

N

R

N

H

G

E

E

F
|
F

V

L

S

T

I

L

L

L

G

G

P

P

S

S

G

G

C
|
C

G

G

K

K

S

T

T

T

L

V

L
|
L

R

R

M

L

I

I

A

A

G

G

L

L

L

E

K

T

P

V

T

D

S

S

G

G

S

R

V

I

-

M

-
x
L

-

D

-

N

-

E

D

D

V

I

F

T

A

H

L

V

P

P

V

-

T

-

A

A

P

E

R

N

D

R

D

Y

I

V

G

N

I

T

V

V

F

F

Q

Q

K

S

P

Y

T

A

L

L

L

F

P

P

W

H

A

M

T

T

V

V

E

F

D

E

N

N

V

V

V

A

F

F

P

G

A

L

R

R

-

M

H

Q

K

K

T

T

G

P

R

-

V

-

T

A

A

A

E

E

E

I

R

T

G

P

R

R

A

V

G

M

E

E

L

A

L

L

S

R

M

M

V
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V

G

Q

L

L

A

E

G

T

F

F

E

A

K

Q

R

R

L

K

P

P

D

H

E

Q

L

L

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S

G

G

M

Q

Q

Q

R

R

V

V

G

A

I

I

A

A

R

R

A

A

L

V

M

N

D

K

P

P

D

R

I

L

L

L

M

L

D
|
D

E

E

P

S

F

L

S

S

A

A

L

L

D

D

A

Y

L

K

T

L

R

R

E

K

V

Q

M

M

G

Q

F

N

D

E

L

L

L

K

R

A

I

L

F

Q

S

R

E

K

R

L

P

G

K

I

T

T

V

F

V

V

F

F

I

V

T

T

H

H

S

D

V

Q

S

E

E

E

A

A

A

L

L

T

L

M

S

S

D

D

R

R

V

I

L

V

V

V

M

M

T

-

G

-

R

R

P

D

G

G

S

R

I

I

F45 (= F37) mutation to L: Lower ATPase activity and transport efficiency.
C54 (= C46) mutation to T: Loss of ATPase activity and transport.
L60 (= L52) mutation to F: Lower ATPase activity and transport efficiency.
L76 (vs. gap) mutation to P: Lower ATPase activity and transport efficiency.
V135 (= V125) mutation to M: Loss of ATPase activity and transport.
D172 (= D162) mutation to N: Loss of ATPase activity and transport.

Sites not aligning to the query:

26 C→A: Lower ATPase activity and transport efficiency.
27 F→L: Lower ATPase activity and transport efficiency.
276 C→A: Lower ATPase activity and transport efficiency.
297 mutation E->K,D: Lower ATPase activity and transport efficiency.; E→Q: Loss of ATPase activity and transport.

8hprC Lpqy-sugabc in state 4 (see paper)
41% identity, 73% coverage: 24:211/257 of query aligns to 18:207/363 of 8hprC

query
sites
8hprC

A

A

L

V

R

K

D

E

V

F

S

S

F

M

D

T

V

I

A

A

R

D

H

G

E

E

F

F

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I

S

I

I

L

L

V

G

G

P

P

S
|
S

G
|
G

C

C

G
|
G

K
|
K

S
|
S

T

T

L

T

L

L

R

N

M

M

I

I

A

A

G

G

L

L

L

E

K

E

P

I

T

T

S

S

G

G

S

E

V

L

D

R

V

I

F

G

A

G

L

E

P

R

V

V

T

N

-

E

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K

A

A

P

P

R

K

D

D

-

R

D

D

I

I

G

A

I

M

V

V

F

F

Q
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Q

K

S

P

Y

T

A

L

L

L

Y

P

P

W

H

A

M

T

T

V

V

E

R

D

Q

N

N

V

I

V

A

F

F

P

P

A

L

R

-

H

-

K

T

T

L

G

A

R

K

V

V

-

P

T

K

A

A

E

E

E

I

R

A

G

A

R

K

A

V

G

E

E

E

L

T

L

A

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K

M

I

V

L

G

D

L

L

A

S

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E

F

L

E

L

K

D

R

R

L

K

P

P

D

G

E
x
Q

L

L

S

S

G
|
G

M
x
Q

Q

R

Q

Q

R

R

V

V

G

A

I

M

A

G

R

R

A

A

L

I

L

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M

R

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P

D

K

I

A

L

F

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L

M

M

D

D

E

Q

P

P

F

L

S

S

A

N

L

L

D

D

A

A

L

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T

L

R

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E

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Q

M

M

G

R

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A

D

E

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I

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L

F

Q

S

D

E

R

R

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P

G

K

T

T

T

V

T

V

V

F

Y

I

V

T

T

H
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H

S

D

V

Q

S

T

E

E

A

A

A

M

L

T

L

L

S

G

D

D

R

R

V

V

L

V

V

V

M

M

binding adenosine-5'-triphosphate: S38 (= S44), G39 (= G45), G41 (= G47), K42 (= K48), S43 (= S49), Q82 (= Q85), Q133 (≠ E137), G136 (= G140), G137 (= G141), Q138 (≠ M142), H192 (= H196)
binding magnesium ion: S43 (= S49), Q82 (= Q85)

Sites not aligning to the query:

binding adenosine-5'-triphosphate: 12

8hprD Lpqy-sugabc in state 4 (see paper)
41% identity, 73% coverage: 24:211/257 of query aligns to 18:207/362 of 8hprD

query
sites
8hprD

A

A

L

V

R

K

D

E

V

F

S

S

F

M

D

T

V

I

A

A

R

D

H

G

E

E

F

F

V

I

S

I

I

L

L

V

G

G

P

P

S
|
S

G

G

C
|
C

G
|
G

K
|
K

S
|
S

T
|
T

L

T

L

L

R

N

M

M

I

I

A

A

G

G

L

L

L

E

K

E

P

I

T

T

S

S

G

G

S

E

V

L

D

R

V

I

F

G

A

G

L

E

P

R

V

V

T

N

-

E

-

K

A

A

P

P

R

K

D

D

-

R

D

D

I

I

G

A

I

M

V

V

F

F

Q
|
Q

K

S

P

Y

T

A

L

L

L

Y

P

P

W

H

A

M

T

T

V

V

E

R

D

Q

N

N

V

I

V

A

F

F

P

P

A

L

R

-

H

-

K

T

T

L

G

A

R

K

V

V

-

P

T

K

A

A

E

E

E

I

R

A

G

A

R

K

A

V

G

E

E

E

L

T

L

A

S

K

M

I

V

L

G

D

L

L

A

S

G

E

F

L

E

L

K

D

R
|
R

L

K

P

P

D

G

E
x
Q

L

L

S
|
S

G
|
G

M

Q

Q

R

Q

Q

R

R

V

V

G

A

I

M

A

G

R

R

A

A

L

I

L

V

M

R

D

S

P

P

D

K

I

A

L

F

L

L

M

M

D

D

E
x
Q

P

P

F

L

S

S

A

N

L

L

D

D

A

A

L

K

T

L

R

R

E

V

V

Q

M

M

G

R

F

A

D

E

L

I

L

S

R

R

I

L

F

Q

S

D

E

R

R

L

P

G

K

T

T

T

V

T

V

V

F

Y

I

V

T

T

H
|
H

S

D

V

Q

S

T

E

E

A

A

A

M

L

T

L

L

S

G

D

D

R

R

V

V

L

V

V

V

M

M

binding adenosine-5'-triphosphate: S38 (= S44), C40 (= C46), G41 (= G47), K42 (= K48), S43 (= S49), T44 (= T50), Q82 (= Q85), R129 (= R133), Q133 (≠ E137), S135 (= S139), G136 (= G140), G137 (= G141), Q159 (≠ E163), H192 (= H196)
binding magnesium ion: S43 (= S49), Q82 (= Q85)

Sites not aligning to the query:

binding adenosine-5'-triphosphate: 12

8y5iA Cryo-em structure of e.Coli spermidine transporter potd-potabc in translocation intermidiate state (see paper)
42% identity, 76% coverage: 23:218/257 of query aligns to 16:211/358 of 8y5iA

query
sites
8y5iA

E

E

A

V

L

I

R

P

D

Q

V

L

S

D

F

L

D

T

V

I

A

N

R

N

H

G

E

E

F

F

V

L

S

T

I

L

L

L

G

G

P

P

S

S

G
|
G

C

C

G

G

K
|
K

S
x
T

T
|
T

L

V

L

L

R

R

M

L

I

I

A

A

G

G

L

L

L

E

K

T

P

V

T

D

S

S

G

G

S

R

V

I

-

M

-

L

-

D

-

N

-

E

D

D

V

I

F

T

A

H

L

V

P

P

V

-

T

-

A

A

P

E

R

N

D

R

D

Y

I

V

G

N

I

T

V

V

F

F

Q

Q

K

S

P

Y

T

A

L

L

L

F

P

P

W

H

A

M

T

T

V

V

E

F

D

E

N

N

V

V

V

A

F

F

P

G

A

L

R

R

-

M

H

Q

K

K

T

T

G

P

R

-

V

-

T

A

A

A

E

E

E

I

R

T

G

P

R

R

A

V

G

M

E

E

L

A

L

L

S

R

M

M

V

V

G

Q

L

L

A

E

G

T

F

F

E

A

K

Q

R
|
R

L

K

P

P

D

H

E
x
Q

L

L

S
|
S

G

G

M

Q

Q

Q

R

R

V

V

G

A

I

I

A

A

R

R

A

A

L

V

M

N

D

K

P

P

D

R

I

L

L

L

M

L

D

D

E

Q

P

S

F

L

S

S

A

A

L

L

D

D

A

Y

L

K

T

L

R

R

E

K

V

Q

M

M

G

Q

F

N

D

E

L

L

L

K

R

A

I

L

F

Q

S

R

E

K

R

L

P

G

K

I

T

T

V

F

V

V

F

F

I

V

T

T

H

H

S

D

V

Q

S

E

E

E

A

A

A

L

L

T

L

M

S

S

D

D

R

R

V

I

L

V

V

V

M

M

T

-

G

-

R

R

P

D

G

G

S

R

I

I

binding adenosine-5'-triphosphate: G38 (= G45), K41 (= K48), T42 (≠ S49), T43 (= T50), R128 (= R133), Q132 (≠ E137), S134 (= S139)

Sites not aligning to the query:

binding adenosine-5'-triphosphate: 12, 15

1q12A Crystal structure of the atp-bound e. Coli malk (see paper)
38% identity, 72% coverage: 26:211/257 of query aligns to 17:204/367 of 1q12A

query
sites
1q12A

R

K

D

D

V

I

S

N

F

L

D

D

V

I

A

H

R

E

H

G

E

E

F

F

V

V

S

V

I

F

L

V

G

G

P

P

S
|
S

G
|
G

C
|
C

G
|
G

K
|
K

S
|
S

T
|
T

L

L

R

R

M

M

I

I

A

A

G

G

L

L

L

E

K

T

P

I

T

T

S

S

G

G

S

-

V

-

D

D

V

L

F

F

A

I

-

G

-

E

-

K

-

R

L

M

P

N

V

D

T

T

A

P

P

P

R

A

D

E

-

R

D

G

I

V

G

G

I

M

V

V

F

F

Q

Q

K

S

P

Y

T

A

L

L

L

Y

P

P

W

H

A

L

T

S

V

V

E

A

D

E

N

N

V

M

V

S

F

F

P

G

A

L

R

K

H

L

K

A

T

G

G

A

R

K

V

K

T

E

A

V

E

I

E

N

R

Q

G

-

R

R

A

V

G

N

E

Q

L

V

L

A

S

E

M

V

V

L

G

Q

L

L

A

A

G

H

F

L

E

L

K

D

R
|
R

L

K

P

P

D

K

E
x
A

L

L

S
|
S

G

G

G
|
G

M
x
Q

Q

R

Q

Q

R

R

V

V

G

A

I

I

A

G

R

R

A

T

L

L

L

V

M

A

D

E

P

P

D

S

I

V

L

F

L

L

M

L

D

D

E

E

P

P

F

L

S

S

A

N

L

L

D

D

A

A

L

A

T

L

R

R

E

V

V

Q

M

M

G

R

F

I

D

E

L

I

L

S

R

R

I

L

F

H

S

K

E

R

R

L

P

G

K

R

T

T

V

M

V

I

F

Y

I

V

T

T

H

H

S

D

V

Q

S

V

E

E

A

A

A

M

L

T

L

L

S

A

D

D

R

K

V

I

L

V

V

V

M

L

binding adenosine-5'-triphosphate: S35 (= S44), G36 (= G45), C37 (= C46), G38 (= G47), K39 (= K48), S40 (= S49), T41 (= T50), R126 (= R133), A130 (≠ E137), S132 (= S139), G134 (= G141), Q135 (≠ M142)

Sites not aligning to the query:

binding adenosine-5'-triphosphate: 10

2awnB Crystal structure of the adp-mg-bound e. Coli malk (crystallized with atp-mg) (see paper)
38% identity, 72% coverage: 26:211/257 of query aligns to 19:206/374 of 2awnB

query
sites
2awnB

R

K

D

D

V

I

S

N

F

L

D

D

V

I

A

H

R

E

H

G

E

E

F

F

V

V

S

V

I

F

L

V

G

G

P

P

S
|
S

G
|
G

C

C

G
|
G

K
|
K

S
|
S

T
|
T

L

L

R

R

M

M

I

I

A

A

G

G

L

L

L

E

K

T

P

I

T

T

S

S

G

G

S

-

V

-

D

D

V

L

F

F

A

I

-

G

-

E

-

K

-

R

L

M

P

N

V

D

T

T

A

P

P

P

R

A

D

E

-

R

D

G

I

V

G

G

I

M

V

V

F

F

Q

Q

K

S

P

Y

T

A

L

L

L

Y

P

P

W

H

A

L

T

S

V

V

E

A

D

E

N

N

V

M

V

S

F

F

P

G

A

L

R

K

H

L

K

A

T

G

G

A

R

K

V

K

T

E

A

V

E

I

E

N

R

Q

G

-

R

R

A

V

G

N

E

Q

L

V

L

A

S

E

M

V

V

L

G

Q

L

L

A

A

G

H

F

L

E

L

K

D

R

R

L

K

P

P

D

K

E

A

L

L

S

S

G

G

M

Q

Q

R

Q

Q

R

R

V

V

G

A

I

I

A

G

R

R

A

T

L

L

L

V

M

A

D

E

P

P

D

S

I

V

L

F

L

L

M

L

D

D

E

E

P

P

F

L

S

S

A

N

L

L

D

D

A

A

L

A

T

L

R

R

E

V

V

Q

M

M

G

R

F

I

D

E

L

I

L

S

R

R

I

L

F

H

S

K

E

R

R

L

P

G

K

R

T

T

V

M

V

I

F

Y

I

V

T

T

H

H

S

D

V

Q

S

V

E

E

A

A

A

M

L

T

L

L

S

A

D

D

R

K

V

I

L

V

V

V

M

L

binding adenosine-5'-diphosphate: S37 (= S44), G38 (= G45), G40 (= G47), K41 (= K48), S42 (= S49), T43 (= T50)

Sites not aligning to the query:

binding adenosine-5'-diphosphate: 12, 17

Query Sequence

>WP_011655336.1 NCBI__GCF_000009265.1:WP_011655336.1
MAMPAIRFDRLGQVFETRSGRTEALRDVSFDVARHEFVSILGPSGCGKSTLLRMIAGLLK
PTSGSVDVFALPVTAPRDDIGIVFQKPTLLPWATVEDNVVFPARHKTGRVTAEERGRAGE
LLSMVGLAGFEKRLPDELSGGMQQRVGIARALLMDPDILLMDEPFSALDALTREVMGFDL
LRIFSERPKTVVFITHSVSEAALLSDRVLVMTGRPGSILTEVTVPVGRPRGPETAKDKAI
HDLSDYLRDLLLTRHAA

Or try a new SitesBLAST search

SitesBLAST's Database

SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory