Comparing WP_011735585.1 NCBI__GCF_000015045.1:WP_011735585.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
P36204 Bifunctional PGK/TIM; EC 2.7.2.3; EC 5.3.1.1 from Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8) (see paper)
55% identity, 98% coverage: 2:246/251 of query aligns to 402:645/654 of P36204
Sites not aligning to the query:
P27876 Triosephosphate isomerase; TIM; TPI; Triose-phosphate isomerase; EC 5.3.1.1 from Bacillus subtilis (strain 168) (see paper)
51% identity, 98% coverage: 1:247/251 of query aligns to 1:247/253 of P27876
P00943 Triosephosphate isomerase; TIM; TPI; Triose-phosphate isomerase; EC 5.3.1.1 from Geobacillus stearothermophilus (Bacillus stearothermophilus) (see 2 papers)
51% identity, 99% coverage: 1:248/251 of query aligns to 1:248/253 of P00943
1btmA Triosephosphate isomerase (tim) complexed with 2-phosphoglycolic acid (see paper)
51% identity, 98% coverage: 2:248/251 of query aligns to 1:247/251 of 1btmA
4y96A Crystal structure of triosephosphate isomerase from gemmata obscuriglobus (see paper)
50% identity, 100% coverage: 2:251/251 of query aligns to 2:250/250 of 4y96A
3uwzA Crystal structure of staphylococcus aureus triosephosphate isomerase complexed with glycerol-2-phosphate (see paper)
49% identity, 98% coverage: 1:247/251 of query aligns to 2:250/254 of 3uwzA
3uwwA Crystal structure of staphylococcus aureus triosephosphate isomerase complexed with 3-phosphoglyceric acid (see paper)
49% identity, 98% coverage: 1:247/251 of query aligns to 2:250/254 of 3uwwA
3uwuA Crystal structure of staphylococcus aureus triosephosphate isomerase complexed with glycerol-3-phosphate (see paper)
49% identity, 98% coverage: 1:247/251 of query aligns to 1:249/253 of 3uwuA
Q6GIL6 Triosephosphate isomerase; TIM; TPI; Triose-phosphate isomerase; EC 5.3.1.1 from Staphylococcus aureus (strain MRSA252) (see paper)
49% identity, 98% coverage: 1:247/251 of query aligns to 1:249/253 of Q6GIL6
3uwvA Crystal structure of staphylococcus aureus triosephosphate isomerase complexed with 2-phosphoglyceric acid (see paper)
49% identity, 98% coverage: 1:247/251 of query aligns to 3:251/255 of 3uwvA
3uwzB Crystal structure of staphylococcus aureus triosephosphate isomerase complexed with glycerol-2-phosphate (see paper)
48% identity, 98% coverage: 1:247/251 of query aligns to 1:246/250 of 3uwzB
6neeB Crystal structure of a reconstructed ancestor of triosephosphate isomerase from eukaryotes (see paper)
47% identity, 99% coverage: 2:250/251 of query aligns to 4:251/252 of 6neeB
6bveA Triosephosphate isomerase of synechocystis in complex with 2- phosphoglycolic acid (see paper)
47% identity, 100% coverage: 1:250/251 of query aligns to 1:241/242 of 6bveA
5zfxB Crystal structure of triosephosphate isomerase from opisthorchis viverrini (see paper)
47% identity, 98% coverage: 2:248/251 of query aligns to 1:245/248 of 5zfxB
6ooiC Crystal structure of triosephosphate isomerase from schistosoma mansoni in complex with 2pg (see paper)
44% identity, 99% coverage: 2:250/251 of query aligns to 8:254/255 of 6ooiC
A0A1L5YRA2 Triosephosphate isomerase; TIM; Allergen Scy p 8; Methylglyoxal synthase; Triose-phosphate isomerase; Allergen Scy p 8.0101; EC 5.3.1.1; EC 4.2.3.3 from Scylla paramamosain (Mud crab) (see paper)
45% identity, 99% coverage: 2:250/251 of query aligns to 5:247/248 of A0A1L5YRA2
4mvaA 1.43 angstrom resolution crystal structure of triosephosphate isomerase (tpia) from escherichia coli in complex with acetyl phosphate. (see paper)
46% identity, 99% coverage: 1:248/251 of query aligns to 1:247/255 of 4mvaA
B1XB85 Triosephosphate isomerase; TIM; TPI; Triose-phosphate isomerase; EC 5.3.1.1 from Escherichia coli (strain K12 / DH10B) (see paper)
46% identity, 99% coverage: 1:248/251 of query aligns to 1:247/255 of B1XB85
P00940 Triosephosphate isomerase; TIM; Methylglyoxal synthase; Triose-phosphate isomerase; EC 5.3.1.1; EC 4.2.3.3 from Gallus gallus (Chicken) (see 3 papers)
45% identity, 99% coverage: 2:250/251 of query aligns to 4:247/248 of P00940
Sites not aligning to the query:
1tpb1 Offset of a catalytic lesion by a bound water soluble (see paper)
44% identity, 99% coverage: 2:250/251 of query aligns to 1:244/245 of 1tpb1
>WP_011735585.1 NCBI__GCF_000015045.1:WP_011735585.1
MRTPLIAGNWKLHKTIAESLAMVDELKPLVAGSRGVEIVVAPVFTALKSVSFALNGSDIG
LAAQDCFWEEQGAFTGEVSPAQLRDAGCSHVIIGHSERRQLFGETDEGVNRKARAAVAVG
LTAIICVGETMEERESRATFTVVGRQVTAALAGFLSHEFSRIVIAYEPVWAIGTGKTATD
QQAQEVHCYIRNLVTMSISQAIADSLRILYGGSVKPDNIRGLMAQPDIDGALIGGASLKA
ASFAEMVNFRG
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory