Comparing WP_011765338.1 NCBI__GCF_000061505.1:WP_011765338.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 9 hits to proteins with known functional sites (download)
P54955 N-acetylcysteine deacetylase; S-(2-succino)cysteine metabolism operon protein P; EC 3.5.1.- from Bacillus subtilis (strain 168)
39% identity, 96% coverage: 10:381/389 of query aligns to 9:371/380 of P54955
O04373 IAA-amino acid hydrolase ILR1-like 4; jasmonoyl-L-amino acid hydrolase; EC 3.5.1.-; EC 3.5.1.127 from Arabidopsis thaliana (Mouse-ear cress) (see paper)
37% identity, 95% coverage: 17:386/389 of query aligns to 51:423/440 of O04373
P54968 IAA-amino acid hydrolase ILR1; EC 3.5.1.- from Arabidopsis thaliana (Mouse-ear cress) (see paper)
37% identity, 94% coverage: 9:374/389 of query aligns to 46:415/442 of P54968
4ewtA The crystal structure of a putative aminohydrolase from methicillin resistant staphylococcus aureus (see paper)
34% identity, 94% coverage: 2:367/389 of query aligns to 4:367/389 of 4ewtA
6slfA Nalpha-acylglutamine aminoacylase from corynebacterium sp.Releasing human axilla odorants co-crystallised with high affinity inhibitor (see paper)
35% identity, 87% coverage: 1:337/389 of query aligns to 6:344/398 of 6slfA
Sites not aligning to the query:
3ramA Crystal structure of hmra (see paper)
23% identity, 74% coverage: 1:289/389 of query aligns to 5:274/391 of 3ramA
Sites not aligning to the query:
P44514 Succinyl-diaminopimelate desuccinylase; SDAP desuccinylase; N-succinyl-LL-2,6-diaminoheptanedioate amidohydrolase; EC 3.5.1.18 from Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) (see 3 papers)
21% identity, 70% coverage: 16:286/389 of query aligns to 7:286/377 of P44514
Sites not aligning to the query:
5vo3A Crystal structure of dape in complex with the products (succinic acid and diaminopimelic acid) (see paper)
21% identity, 70% coverage: 16:286/389 of query aligns to 11:290/380 of 5vo3A
Sites not aligning to the query:
7t1qA Crystal structure of the succinyl-diaminopimelate desuccinylase (dape) from acinetobacter baumannii in complex with succinic acid
22% identity, 59% coverage: 109:337/389 of query aligns to 108:331/377 of 7t1qA
Sites not aligning to the query:
>WP_011765338.1 NCBI__GCF_000061505.1:WP_011765338.1
MSIIDIVSPRLYNLKAIRRDLHAHPELAFAEHRTADVVARHLTSLGLEVHRGLGGTGVVG
VVRGGRGLRAIGLRADMDALPITERNTFAHRSTVEACMHACGHDGHTTMLLGAAEVLAAR
PDFDGTVYLIFQPAEEGEGGARAMIEDGLFDRFPMESVFGMHNWPGMAAGSFAVHAGPVM
ASADRFDITVRGHGAHAAMPHLGTDPVTAAAALVQAVQTIVSRNLDPVVSAVVSITQFHA
GEAYNAIPDRAELAGTVRAFSEQVQEAVEARLRTLCEGTAAAFGVEVEFEYRRGYPPTVN
TAAEAALCADAARAVAGEGAVTTAAPPSMGAEDFAFFLQKKPGAYIWIGNGPGEGGCTLH
NPHYDFNDDILPAGIGYWVELVRRLLPAR
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory