Comparing WP_011800804.1 NCBI__GCF_000015505.1:WP_011800804.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 12 hits to proteins with known functional sites (download)
8bftA The e. Coli trpd2 protein ybib in complex with a c-terminal peptide from obge (see paper)
41% identity, 98% coverage: 1:295/301 of query aligns to 2:301/321 of 8bftA
2gvqD Anthranilate phosphoribosyl-transferase (trpd) from s. Solfataricus in complex with anthranilate (see paper)
25% identity, 74% coverage: 1:223/301 of query aligns to 1:221/345 of 2gvqD
P50384 Anthranilate phosphoribosyltransferase; EC 2.4.2.18 from Saccharolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) (Sulfolobus solfataricus) (see 2 papers)
25% identity, 74% coverage: 1:223/301 of query aligns to 1:221/345 of P50384
Sites not aligning to the query:
1zxyA Anthranilate phosphoribosyltransferase from sulfolobus solfataricus in complex with prpp and magnesium (see paper)
25% identity, 74% coverage: 1:223/301 of query aligns to 1:221/344 of 1zxyA
Sites not aligning to the query:
1gxbA Anthranilate phosphoribosyltransferase in complex with pyrophosphate and magnesium (see paper)
24% identity, 74% coverage: 1:223/301 of query aligns to 1:217/339 of 1gxbA
Sites not aligning to the query:
3gbrA Anthranilate phosphoribosyl-transferase (trpd) double mutant d83g f149s from s. Solfataricus (see paper)
23% identity, 74% coverage: 1:223/301 of query aligns to 1:218/341 of 3gbrA
Sites not aligning to the query:
5nofA Anthranilate phosphoribosyltransferase from thermococcus kodakaraensis (see paper)
29% identity, 69% coverage: 15:221/301 of query aligns to 9:214/325 of 5nofA
Sites not aligning to the query:
4n5vA Alternative substrates of mycobacterium tuberculosis anthranilate phosphoribosyl transferase (see paper)
26% identity, 74% coverage: 2:223/301 of query aligns to 1:227/347 of 4n5vA
Sites not aligning to the query:
4owoA Anthranilate phosphoribosyl transferase from mycobacterium tuberculosis in complex with 6-fluoroanthranilate, prpp and magnesium (see paper)
26% identity, 74% coverage: 2:223/301 of query aligns to 1:227/348 of 4owoA
Sites not aligning to the query:
P9WFX5 Anthranilate phosphoribosyltransferase; EC 2.4.2.18 from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) (see 2 papers)
26% identity, 74% coverage: 2:223/301 of query aligns to 23:249/370 of P9WFX5
5c2lA Magnesium soaked into the active site of mycobacterium tuberculosis anthranilate phosphoribosyltransferase (anprt; trpd)
26% identity, 74% coverage: 2:223/301 of query aligns to 1:227/349 of 5c2lA
Sites not aligning to the query:
4yi7A Anthranilate bound at active site of anthranilate phosphoribosyl transferase from acinetobacter (anprt; trpd)
23% identity, 59% coverage: 20:196/301 of query aligns to 17:184/331 of 4yi7A
>WP_011800804.1 NCBI__GCF_000015505.1:WP_011800804.1
MSISHYIKEIGRGKDGARPLSRAQAADLLGQVLDGVVTDLEIGGFCLAMRIKGETPEEMA
GFLDAVHQRLNLLPASDGPTVVLPSYNGARKLPVLTPLLALLLAREGLSVLVHGTPTESS
RVFSSEVLSALGTQALTAIKPIAPGEVVFAPTELLSPALKRLLDVRRAVGLRNPAHSLVK
LMNPVAGKALVVSSYTHPEYALSMAATFELVQADALLLRGTEGEGVADPRRSPQMQGFVK
GQRVLAHEGVKGTLPSVPDLPKAIDASSTAAYIQSVLAGDSPLPPSIAQQVEHILQLVRQ
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory