SitesBLAST – Find functional sites

 

SitesBLAST

Comparing WP_011802640.1 NCBI__GCF_000015505.1:WP_011802640.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.

Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures

Found 1 hits to proteins with known functional sites (download)

P68183 Maltose/maltodextrin transport system permease protein MalG from Escherichia coli (strain K12) (see 2 papers)
38% identity, 22% coverage: 182:246/294 of query aligns to 181:245/296 of P68183

query
sites
P68183
F
 
F
N
 
E
R
 
T
F
 
I
N
 
D
P
 
S
V
 
S
Y
 
L
E
 
E
E
|
E
A
 
A
A
|
A
R
 
A
D
 
L
L
 
D
G
|
G
A
 
A
T
 
T
P
 
P
W
 
W
Q
 
Q
G
 
A
F
 
F
R
 
R
H
 
L
V
 
V
V
 
L
L
 
L
P
|
P
L
 
L
I
 
S
A
 
V
P
 
P
S
 
I
V
 
L
V
 
A
G
 
V
I
 
V
A
 
F
M
 
I
F
 
L
G
 
S
F
 
F
T
 
I
L
 
A
S
 
A
W
 
I
D
 
T
E
 
E
I
 
V
A
 
P
R
 
V
T
 
A
S
 
S
Q
 
L
A
 
L
I
 
L
G
 
R
D
 
D
V
 
V
N
 
N
T
 
S
L
 
Y
P
 
T
L
 
L

Query Sequence

>WP_011802640.1 NCBI__GCF_000015505.1:WP_011802640.1
MTRDKRPAAFWFLALFFALFVLFLYGPMLVIVVLSFQGPEGGLTFPLRGVSLHWFYKLAE
GLGVVDIGAALMRSLGLGLAVMALTVVFSVLAGLAFRKKLAGGNTLFLIVVASLIMPSII
VSLGIGLEFRLLDTGIKQALEFFGMADTLEGYGTALGLFTSALGAHLTWTLPFGLLIMFA
IFNRFNPVYEEAARDLGATPWQGFRHVVLPLIAPSVVGIAMFGFTLSWDEIARTSQAIGD
VNTLPLELQGLTSTVTTPSIYALGTVTTVVSLLVVGAAIGLAGWLGRRQKKGAR

Or try a new SitesBLAST search

SitesBLAST's Database

SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory