Comparing WP_011803054.1 NCBI__GCF_000015505.1:WP_011803054.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 3 hits to proteins with known functional sites (download)
P94530 Arabinooligosaccharides transport system permease protein AraQ from Bacillus subtilis (strain 168) (see paper)
27% identity, 99% coverage: 4:289/289 of query aligns to 3:281/281 of P94530
P68183 Maltose/maltodextrin transport system permease protein MalG from Escherichia coli (strain K12) (see 2 papers)
29% identity, 93% coverage: 22:289/289 of query aligns to 24:296/296 of P68183
7cagA Mycobacterium smegmatis lpqy-sugabc complex in the catalytic intermediate state (see paper)
26% identity, 30% coverage: 176:261/289 of query aligns to 178:260/285 of 7cagA
Sites not aligning to the query:
>WP_011803054.1 NCBI__GCF_000015505.1:WP_011803054.1
MTAKHPFAKHLSRALLYAVLLVAALFFLAPFYVMLATSFKDAEQIRSGNLLSPPASLNFD
AWRLAWSSACTGVDCRGLQPYFWNSVSMAIPAVLISTAWGAVNGYVLSLWKFRGSELLFG
FLLFGVFMPFQVVLLPMSQVLGYLGLSSSIGGLVLVHCLAGMAGTTLFFRNYYTAIPKEL
VNAARMDGAGFWRIFWRIVLPLSTPILMVTLIWQFTNIWNDFLFGVAFSGADSKPITVGL
NNMANTSSSVKSYNVDMAAAVIAGLPTMLVYVLAGQYFVKGLTAGAVKG
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory