SitesBLAST
Comparing WP_011813812.1 NCBI__GCF_000015585.1:WP_011813812.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
3daaA Crystallographic structure of d-amino acid aminotransferase inactivated by pyridoxyl-d-alanine (see paper)
35% identity, 93% coverage: 10:275/286 of query aligns to 6:272/277 of 3daaA
- active site: Y31 (= Y35), V33 (= V37), K145 (= K148), E177 (= E180), L201 (= L204)
- binding n-(5'-phosphopyridoxyl)-d-alanine: Y31 (= Y35), R50 (= R54), K145 (= K148), E177 (= E180), S180 (≠ A183), S181 (= S184), L201 (= L204), G203 (= G206), I204 (≠ V207), T205 (= T208), S240 (= S243), T241 (≠ A244)
2daaA Crystallographic structure of d-amino acid aminotransferase inactivated by d-cycloserine
35% identity, 93% coverage: 10:275/286 of query aligns to 6:272/277 of 2daaA
- active site: Y31 (= Y35), V33 (= V37), K145 (= K148), E177 (= E180), L201 (= L204)
- binding d-[3-hydroxy-2-methyl-5-phosphonooxymethyl-pyridin-4-ylmethyl]-n,o-cycloserylamide: Y31 (= Y35), V33 (= V37), R50 (= R54), R98 (= R103), H100 (= H105), K145 (= K148), E177 (= E180), S180 (≠ A183), S181 (= S184), N182 (≠ T185), L201 (= L204), G203 (= G206), I204 (≠ V207), T205 (= T208), T241 (≠ A244)
1daaA Crystallographic structure of d-amino acid aminotransferase complexed with pyridoxal-5'-phosphate (see paper)
35% identity, 93% coverage: 10:275/286 of query aligns to 6:272/277 of 1daaA
- active site: Y31 (= Y35), V33 (= V37), K145 (= K148), E177 (= E180), L201 (= L204)
- binding pyridoxal-5'-phosphate: R50 (= R54), K145 (= K148), E177 (= E180), S180 (≠ A183), S181 (= S184), L201 (= L204), G203 (= G206), I204 (≠ V207), T205 (= T208), S240 (= S243), T241 (≠ A244)
3lqsA Complex structure of d-amino acid aminotransferase and 4-amino-4,5- dihydro-thiophenecarboxylic acid (adta) (see paper)
35% identity, 93% coverage: 10:275/286 of query aligns to 6:272/280 of 3lqsA
- active site: Y31 (= Y35), V33 (= V37), K145 (= K148), E177 (= E180), L201 (= L204)
- binding 4-[({3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methyl)amino]thiophene-2-carboxylic acid: V33 (= V37), R50 (= R54), E177 (= E180), S180 (≠ A183), S181 (= S184), N182 (≠ T185), L201 (= L204), G203 (= G206), I204 (≠ V207), T205 (= T208), S240 (= S243), T241 (≠ A244), T242 (= T245)
P19938 D-alanine aminotransferase; D-amino acid aminotransferase; D-amino acid transaminase; DAAT; D-aspartate aminotransferase; EC 2.6.1.21 from Bacillus sp. (strain YM-1) (see 5 papers)
35% identity, 93% coverage: 10:275/286 of query aligns to 7:273/283 of P19938
- Y32 (= Y35) binding substrate
- R51 (= R54) binding pyridoxal 5'-phosphate
- R99 (= R103) binding substrate
- H101 (= H105) binding substrate
- K146 (= K148) active site, Proton acceptor; modified: N6-(pyridoxal phosphate)lysine
- E178 (= E180) binding pyridoxal 5'-phosphate; mutation to K: Loss of transaminase activity and small gain in racemase activity.
- L202 (= L204) mutation to A: Inactivates enzyme.
Sites not aligning to the query:
- 1 modified: Initiator methionine, Removed
1a0gB L201a mutant of d-amino acid aminotransferase complexed with pyridoxamine-5'-phosphate (see paper)
34% identity, 93% coverage: 10:275/286 of query aligns to 6:272/282 of 1a0gB
- active site: Y31 (= Y35), V33 (= V37), K145 (= K148), E177 (= E180), A201 (≠ L204)
- binding 4'-deoxy-4'-aminopyridoxal-5'-phosphate: R50 (= R54), K145 (= K148), E177 (= E180), S180 (≠ A183), S181 (= S184), G203 (= G206), I204 (≠ V207), T205 (= T208), S240 (= S243), T241 (≠ A244)
5mr0D Thermophilic archaeal branched-chain amino acid transaminases from geoglobus acetivorans and archaeoglobus fulgidus: biochemical and structural characterisation (see paper)
32% identity, 96% coverage: 7:280/286 of query aligns to 4:282/290 of 5mr0D
- active site: F32 (≠ Y35), G34 (≠ V37), K150 (= K148), E183 (= E180), L206 (= L204)
- binding 3-[o-phosphonopyridoxyl]--amino-benzoic acid: R51 (= R54), G100 (≠ R103), L101 (≠ T104), K150 (= K148), Y154 (≠ L152), E183 (= E180), G186 (≠ A183), D187 (≠ S184), L206 (= L204), I209 (≠ V207), T210 (= T208), G245 (≠ S243), T246 (≠ A244)
7p3tB Transaminase of gamma-proteobacterium (see paper)
35% identity, 96% coverage: 7:280/286 of query aligns to 6:284/299 of 7p3tB
- binding pyridoxal-5'-phosphate: R53 (= R54), K153 (= K148), R157 (≠ L152), E186 (= E180), S187 (≠ G181), A188 (= A182), A189 (= A183), S190 (= S184), G210 (= G206), I211 (≠ V207), T212 (= T208), T248 (≠ A244)
5e25A Crystal structure of branched-chain aminotransferase from thermophilic archaea geoglobus acetivorans complexed with alpha-ketoglutarate (see paper)
34% identity, 97% coverage: 7:282/286 of query aligns to 5:284/290 of 5e25A
- active site: F33 (≠ Y35), G35 (≠ V37), K151 (= K148), E184 (= E180), L207 (= L204)
- binding 2-oxoglutaric acid: Y88 (≠ S90), K151 (= K148), T247 (≠ A244), A248 (≠ T245)
- binding pyridoxal-5'-phosphate: R52 (= R54), K151 (= K148), Y155 (≠ L152), E184 (= E180), G187 (≠ A183), D188 (≠ S184), L207 (= L204), G209 (= G206), I210 (≠ V207), T211 (= T208), G246 (≠ S243), T247 (≠ A244)
2ej2A Crystal structure of t.Th.Hb8 branched-chain amino acid aminotransferase complexed with n-(5'-phosphopyridoxyl)-l-glutamate
30% identity, 91% coverage: 7:267/286 of query aligns to 7:267/294 of 2ej2A
- active site: F35 (≠ Y35), G37 (≠ V37), K147 (vs. gap), E181 (= E180), L204 (= L204)
- binding 4-[(1,3-dicarboxy-propylamino)-methyl]-3-hydroxy-2-methyl-5-phosphonooxymethyl-pyridinium: R58 (= R54), Y94 (= Y92), Y152 (≠ L152), E181 (= E180), G184 (≠ A183), E185 (≠ S184), L204 (= L204), G206 (= G206), I207 (≠ V207), T208 (= T208), T244 (≠ A244), A245 (≠ T245)
2ej3A Crystal structure of t.Th.Hb8 branched-chain amino acid aminotransferase complexed with gabapentin
30% identity, 91% coverage: 7:267/286 of query aligns to 7:270/297 of 2ej3A
- active site: F35 (≠ Y35), G37 (≠ V37), K150 (vs. gap), E184 (= E180), L207 (= L204)
- binding [1-(aminomethyl)cyclohexyl]acetic acid: G187 (≠ A183), G246 (≠ S243), T247 (≠ A244), A248 (≠ T245)
- binding pyridoxal-5'-phosphate: R58 (= R54), K150 (vs. gap), Y155 (≠ L152), E184 (= E180), G187 (≠ A183), L207 (= L204), G209 (= G206), I210 (≠ V207), T211 (= T208), G246 (≠ S243), T247 (≠ A244)
2eiyA Crystal structure of t.Th.Hb8 branched-chain amino acid aminotransferase complexed with 4-methylvaleric acid
30% identity, 91% coverage: 7:267/286 of query aligns to 7:270/297 of 2eiyA
- active site: F35 (≠ Y35), G37 (≠ V37), K150 (vs. gap), E184 (= E180), L207 (= L204)
- binding 4-methyl valeric acid: F35 (≠ Y35), Y94 (= Y92), T247 (≠ A244), A248 (≠ T245)
- binding pyridoxal-5'-phosphate: R58 (= R54), K150 (vs. gap), Y155 (≠ L152), E184 (= E180), G187 (≠ A183), E188 (≠ S184), L207 (= L204), G209 (= G206), I210 (≠ V207), T211 (= T208), G246 (≠ S243), T247 (≠ A244)
1wrvA Crystal structure of t.Th.Hb8 branched-chain amino acid aminotransferase
30% identity, 91% coverage: 7:267/286 of query aligns to 7:270/297 of 1wrvA
- active site: F35 (≠ Y35), G37 (≠ V37), K150 (vs. gap), E184 (= E180), L207 (= L204)
- binding pyridoxal-5'-phosphate: R58 (= R54), K150 (vs. gap), Y155 (≠ L152), E184 (= E180), G187 (≠ A183), L207 (= L204), G209 (= G206), I210 (≠ V207), T211 (= T208), T247 (≠ A244)
2ej0B Crystal structure of t.Th.Hb8 branched-chain amino acid aminotransferase with pyridoxamine 5'-phosphate
29% identity, 91% coverage: 7:267/286 of query aligns to 7:278/305 of 2ej0B
- active site: F35 (≠ Y35), G37 (≠ V37), K158 (vs. gap), E192 (= E180), L215 (= L204)
- binding 4'-deoxy-4'-aminopyridoxal-5'-phosphate: R58 (= R54), Y163 (≠ L152), E192 (= E180), G195 (≠ A183), E196 (≠ S184), L215 (= L204), G217 (= G206), I218 (≠ V207), T219 (= T208), G254 (≠ S243), T255 (≠ A244)
6xwbA Crystal structure of an r-selective transaminase from thermomyces stellatus. (see paper)
28% identity, 93% coverage: 7:271/286 of query aligns to 30:300/319 of 6xwbA
- binding pyridoxal-5'-phosphate: R77 (= R54), K178 (≠ V150), F185 (≠ L157), E211 (= E180), G214 (≠ A183), F215 (≠ S184), N216 (≠ T185), L233 (= L204), G235 (= G206), V236 (= V207), T237 (= T208), T273 (≠ A244)
1iyeA Crystal structure of eschelichia coli branched-chain amino acid aminotransferase (see paper)
29% identity, 94% coverage: 7:275/286 of query aligns to 5:285/304 of 1iyeA
- active site: F33 (≠ Y35), G35 (≠ V37), K156 (vs. gap), A157 (vs. gap), E190 (= E180), L214 (= L204)
- binding N-({3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methyl)-L-glutamic acid: R56 (= R54), Y92 (≠ S90), Y126 (vs. gap), K156 (vs. gap), Y161 (≠ L152), E190 (= E180), G193 (≠ A183), E194 (≠ S184), N195 (≠ T185), L214 (= L204), G216 (= G206), I217 (≠ V207), T218 (= T208), G253 (≠ S243), T254 (≠ A244), A255 (≠ T245)
1iydA Crystal structure of eschelichia coli branched-chain amino acid aminotransferase (see paper)
29% identity, 94% coverage: 7:275/286 of query aligns to 5:285/304 of 1iydA
- active site: F33 (≠ Y35), G35 (≠ V37), K156 (vs. gap), A157 (vs. gap), E190 (= E180), L214 (= L204)
- binding glutaric acid: Y92 (≠ S90), Y126 (vs. gap), A255 (≠ T245)
- binding pyridoxal-5'-phosphate: R56 (= R54), K156 (vs. gap), Y161 (≠ L152), E190 (= E180), G193 (≠ A183), E194 (≠ S184), L214 (= L204), G216 (= G206), I217 (≠ V207), T218 (= T208), T254 (≠ A244)
1i1mA Crystal structure of escherichia coli branched-chain amino acid aminotransferase. (see paper)
29% identity, 94% coverage: 7:275/286 of query aligns to 5:285/304 of 1i1mA
- active site: K156 (vs. gap)
- binding 4-methyl valeric acid: Y92 (≠ S90), K156 (vs. gap), T254 (≠ A244), A255 (≠ T245)
- binding pyridoxal-5'-phosphate: R56 (= R54), K156 (vs. gap), Y161 (≠ L152), E190 (= E180), G193 (≠ A183), E194 (≠ S184), L214 (= L204), G216 (= G206), I217 (≠ V207), T218 (= T208), G253 (≠ S243), T254 (≠ A244)
1i1lA Crystal structure of eschelichia coli branched-chain amino acid aminotransferase. (see paper)
29% identity, 94% coverage: 7:275/286 of query aligns to 5:285/304 of 1i1lA
- active site: K156 (vs. gap)
- binding 2-methylleucine: Y92 (≠ S90), K156 (vs. gap), T254 (≠ A244), A255 (≠ T245)
- binding pyridoxal-5'-phosphate: R56 (= R54), K156 (vs. gap), Y161 (≠ L152), E190 (= E180), G193 (≠ A183), G216 (= G206), I217 (≠ V207), T218 (= T208), T254 (≠ A244)
4ce5B First crystal structure of an (r)-selective omega-transaminase from aspergillus terreus (see paper)
28% identity, 93% coverage: 7:271/286 of query aligns to 32:302/325 of 4ce5B
- active site: Y60 (= Y35), K180 (≠ E138), E213 (= E180), L235 (= L204)
- binding calcium ion: D67 (≠ G42), R69 (≠ V44)
- binding n-({3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methyl)-d-glutamic acid: V62 (= V37), R79 (= R54), K180 (≠ E138), W184 (= W142), E213 (= E180), G216 (≠ A183), F217 (≠ S184), N218 (≠ T185), L235 (= L204), G237 (= G206), V238 (= V207), T239 (= T208), T274 (≠ S243), T275 (≠ A244), A276 (≠ T245)
- binding pyridoxal-5'-phosphate: R79 (= R54), K180 (≠ E138), E213 (= E180), G216 (≠ A183), F217 (≠ S184), L235 (= L204), G237 (= G206), V238 (= V207), T239 (= T208), T275 (≠ A244)
Query Sequence
>WP_011813812.1 NCBI__GCF_000015585.1:WP_011813812.1
MGTPATCYLNGELMALGSARISPLDRGFLFGDGVYEVIPCYGGVPFRLDAHLRRLANSLA
AIELPDPLSPAGWPEVLEQVCQANGGGDQSLYVQVTRGCPEQRTHEFPARSEPTVFVMSS
PLPAAGAFADGLSTTLLEDLRWARCDIKAVALLPNVLLRQAAVAAGADEAILHRDGWVTE
GAASTVFIVRGGELATPALHPGLLPGVTREVILELAEHHGLPCQCRPVARDELHEADEVW
LSSATKEVAPVLTIDGHPVGHGTPGPVFEAMRGWFTRLRQETARGR
Or try a new SitesBLAST search
SitesBLAST's Database
SitesBLAST's database includes
(1) SwissProt
entries with experimentally-supported functional features;
and (2) protein structures with bound ligands, from the
BioLip database.
by Morgan Price,
Arkin group
Lawrence Berkeley National Laboratory