SitesBLAST

SitesBLAST – Find functional sites

SitesBLAST

Comparing WP_011814380.1 NCBI__GCF_000015585.1:WP_011814380.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.

Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures

Found 20 (the maximum) hits to proteins with known functional sites (download)

P09342 Acetolactate synthase 1, chloroplastic; ALS I; Acetohydroxy-acid synthase I; Acetolactate synthase I; EC 2.2.1.6 from Nicotiana tabacum (Common tobacco) (see 2 papers)
46% identity, 92% coverage: 26:602/628 of query aligns to 96:659/667 of P09342

query
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P09342

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C161 (≠ F104) modified: Disulfide link with 307
P194 (= P137) mutation to Q: In C3; highly resistant to sulfonylurea herbicides.
C307 (≠ V254) modified: Disulfide link with 161

P09114 Acetolactate synthase 2, chloroplastic; ALS II; Acetohydroxy-acid synthase II; Acetolactate synthase II; EC 2.2.1.6 from Nicotiana tabacum (Common tobacco) (see paper)
47% identity, 92% coverage: 26:602/628 of query aligns to 93:656/664 of P09114

query
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P09114

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P191 (= P137) mutation to A: In S4-Hra; highly resistant to sulfonylurea herbicides; when associated with L-568.
W568 (= W519) mutation to L: In S4-Hra; highly resistant to sulfonylurea herbicides; when associated with A-191.

P17597 Acetolactate synthase, chloroplastic; AtALS; Acetohydroxy-acid synthase; Protein CHLORSULFURON RESISTANT 1; EC 2.2.1.6 from Arabidopsis thaliana (Mouse-ear cress) (see 8 papers)
45% identity, 92% coverage: 26:602/628 of query aligns to 99:662/670 of P17597

query
sites
P17597

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E

E

A

T

P

P

I

I

V

V

N

E

I

V

M

T

G

R

S

S

C

I

A

T

K
|
K

H

H

V

N

F

Y

L

L

V

V

T

M

D

D

P

V

E

E

Q

D

L

I

E

P

A

R

T

I

V

I

R

E

T

E

A

A

F

F

E

F

V

L

A

A

R

T

S

S

G

G

R
|
R

P

P

G

G

P

P

V

V

V

L

V

V

D

D

V

V

P

P

K
|
K

N

D

M

I

Q

Q

N

Q

W

Q

I

L

G

A

E

I

F

P

R

N

G

W

E

E

G

Q

V

A

L

M

E

R

V

L

R

P

G

G

Y

Y

R

M

Q

S

R

R

M

M

E

P

S

K

L

-

R

-

S

-

A

-

K

P

L

P

S

E

D

D

R

S

K

H

C

L

R

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A

Q

F

I

M

V

E

R

M

L

L

I

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S

R

E

S

S

R

K

P

P

L

V

L

L

Y

Y

V

V

G

G

G
|
G

G

G

V

C

V

L

S

N

G

-

E

-

A

S

H

S

Q

D

E

E

L

L

R

G

D

R

F

F

A

V

H

E

T

L

F

T

G

G

I

I

P

P

V

V

V

A

S

S

T
|
T

L
|
L

M

M

G

G

L

L

G

G

A

S

V

Y

D

P

T
x
C

T

D

D

D

D

E

L

L

Y

S

L

L

G

H

M

M

L
|
L

G
|
G

M
|
M

H
|
H

G

G

T

T

A

V

Y

Y

A

A

N

N

Y

Y

A

A

V

V

E

E

D

H

C

S

D

D

F

L

L

L

I

L

A

A

V

F

G
|
G

A
x
V

R
|
R

F
|
F

D
|
D

R
|
R

V

V

A

T

G

G

K

K

V

L

E

E

E

A

F

F

A

A

P

S

L

R

A

A

E

-

Q

K

I

I

A

V

H

H

I

I

D
|
D

I
|
I

D

D

A

S

A

A

E

E

I

I

G

G

K

K

V

N

K

K

G

T

V

P

D

H

W

V

A

S

H

V

V

C

G

G

E
x
D

A
x
V

G

K

R

L

S

A

L

L

R

Q

Q

G

L

M

L

N

R

K

Y

V

G

L

E

E

S

N

M

R

G

A

F

E

E

E

P

L

R

K

F

L

D

D

-

F

-

G

A

V

W

W

L

R

E

N

H

E

V

L

R

N

G

V

L

Q

R

K

E

Q

R

K

H

F

P

P

M

L

D

S

Y

F

D

K

R

T

D

F

S

G

A

E

L

A

I

I

Q

P

P

P

H

Q

Y

Y

V

A

L

I

E

K

K

V

L

L

N

D

E

E

L

L

T

T

A

D

G

G

E

K

A

A

I

I

A

S

T

T

G

G

V

V

G

G

Q
|
Q

H
|
H

Q

Q

M

M

W

W

A

A

Q

Q

Y

F

C

Y

D

N

F

Y

R

K

G

K

P

P

R

R

Q

Q

W

W

L

L

T

S

S

S

G
|
G

L

L

G
|
G

T
x
A

M
|
M

G

G

F

F

G

G

L

L

P

P

A

A

I

I

G

G

A

A

Y

S

L

V

G

A

R

N

P

P

D

D

R

A

V

I

V

V

I

V

D

D

V

I

D

D

G

G

D
|
D

G
|
G

S
|
S

L

F

R

I

M

M

N

N

L

V

G

Q

E

E

L

L

E

A

T

T

A

I

T

R

T

V

Y

E

N

N

L

L

P

P

V

V

K

K

I

V

L

L

S

L

L

L

N

N

N
|
N

V
x
Q

G
x
H

D
x
L

G
|
G

M
|
M

V

V

R

M

Q

Q

W
|
W

Q

E

-

D

K

R

L

F

Y

Y

F

K

G

A

D

N

R

R

-

A

-

H

-

T

F

F

S

L

G

G

S

D

D

P

K

A

S

Q

L

E

H

D

R

E

-

I

-

F

K

P

D

N

F

M

I

L

K

L

A

F

A

A

E

A

A

A

D

C

G

G

Y

I

E

P

F

-

A

A

R

A

R

R

V

V

A

T

D

K

K

K

E

A

E

D

L

L

E

R

E

E

A

A

L

I

R

Q

A

T

F

M

V

L

E

D

F

T

P

P

G

G

P

P

A

Y

F

L

L

L

E

D

V

V

M

I

I

C

D

P

P

H

D

Q

A

E

G

H

V

V

F

L

P

P

M

M

V

I

G

P

P
x
S

G

G

S

G

S

T

Y

F

K

N

E

D

M

V

V

I

T

T

A122 (= A49) mutation to V: Reduced catalytic activity. Resistant to imidazolinone herbicides but not to sulfonylurea herbicides.
M124 (≠ L51) mutation to E: Reduced catalytic activity. Resistant to imidazolinone herbicides and reduced sensitivity to sulfonylurea herbicides.; mutation to I: No effect on catalytic activity. Increased resistance to imidazolinone herbicides.
E144 (= E84) binding thiamine diphosphate
S186 (= S126) binding FAD
P197 (= P137) mutation to S: In csr1-1/GH50; resistant to sulfonylurea but not to imidazolinone herbicides.
R199 (≠ H139) mutation R->A,E: No effect on catalytic activity. Resistant to imidazolinone herbicides but not to sulfonylurea herbicides.
Q207 (= Q147) binding thiamine diphosphate
K220 (= K160) binding (R)-imazaquin
R246 (= R186) binding (R)-imazaquin; binding FAD
K256 (= K196) binding chlorimuron-ethyl
G308 (= G252) binding FAD
TL 331:332 (= TL 277:278) binding FAD
C340 (≠ T286) modified: Cysteine sulfinic acid (-SO2H)
LGMH 349:352 (= LGMH 295:298) binding FAD
GVRFD 371:375 (≠ GARFD 317:321) binding FAD
DR 376:377 (= DR 322:323) binding chlorimuron-ethyl
DI 395:396 (= DI 342:343) binding FAD
DV 414:415 (≠ EA 361:362) binding FAD
QH 487:488 (= QH 432:433) binding thiamine diphosphate
GG 508:509 (= GG 453:454) binding FAD
GAM 511:513 (≠ GTM 456:458) binding thiamine diphosphate
D538 (= D483) binding Mg(2+)
DGS 538:540 (= DGS 483:485) binding thiamine diphosphate
N565 (= N510) binding Mg(2+)
NQHLGM 565:570 (≠ NVGDGM 510:515) binding thiamine diphosphate
H567 (≠ G512) binding Mg(2+)
W574 (= W519) binding chlorimuron-ethyl; mutation to L: Increased catalytic activity. Resistant to imidazolinone and sulfonylurea herbicides.; mutation to S: Slightly decreased catalytic activity. Resistant to imidazolinone and sulfonylurea herbicides.
S653 (≠ P593) binding chlorimuron-ethyl; mutation to A: No effect on catalytic activity or sensitivity to herbicides.; mutation to F: No effect on catalytic activity. Resistant to imidazolinone herbicides and also slightly sulfonylurea-resistant.; mutation to N: In csr1-2/GH90; no effect on catalytic activity. Resistant to imidazolinone but not to sulfonylurea herbicides.; mutation to T: No effect on catalytic activity. Resistant to imidazolinone herbicides but not to sulfonylurea herbicides.

5k2oA Crystal structure of arabidopsis thaliana acetohydroxyacid synthase in complex with a pyrimidinyl-benzoate herbicide, pyrithiobac (see paper)
45% identity, 92% coverage: 26:602/628 of query aligns to 14:577/585 of 5k2oA

query
sites
5k2oA

G

G

G

A

E

D

I

I

I

L

V

V

E

E

V

A

L

L

A

E

Q

R

E

Q

G

G

V

V

D

E

T

T

L

V

F

F

G

A

Y
|
Y

S

P

G
|
G

A
|
A

I
x
S

L

M

P

E

T

I

Y

H

D

-

A

-

I

-

F

-

K

-

Y

-

N

-

E

-

R

-

H

-

R

-

K

-

E

-

Q

Q

A

A

V

L

E

T

E

R

E

S

D

S

P

S

I

I

R

R

L

N

I

V

V

L

P

P

A

R

N

H

E
|
E

Q

Q

G

G

A

G

G

V

F

F

M

A

A

A

A

E

G

G

Y

Y

A

A

R

R

A

S

T

S

G

G

K

K

V

P

G

G

C

I

F

C

L

I

V

A

T
|
T

S

S

G

G

P

P

G

G

A

A

T

T

N

N

T

L

V

V

T

S

P

G

I

L

R

A

D

D

C

A

M

L

A

L

D

D

S

S

V

V

P

P

V

L

V

V

A

A

I

I

T

T

G

G

Q

Q

V

V

P

P

T

R

H

R

A

M

M

I

G

G

T

T

D

D

A

A

F
|
F

Q
|
Q

E
|
E

A

T

P

P

I

I

V

V

N

E

I

V

M

T

G

R

S

S

C

I

A

T

K

K

H

H

V

N

F

Y

L

L

V

V

T

M

D

D

P

V

E

E

Q

D

L

I

E

P

A

R

T

I

V

I

R

E

T

E

A

A

F

F

E

F

V

L

A

A

R

T

S

S

G

G

R
|
R

P

P

G

G

P

P

V

V

V

L

V

V

D

D

V

V

P

P

K
|
K

N

D

M

I

Q

Q

N

Q

W

Q

I

L

G

A

E

I

F

P

R

N

G

W

E

E

G

Q

V

A

L

M

E

R

V

L

R

P

G

G

Y

Y

R

M

Q

S

R

R

M

M

E

P

S

K

L

-

R

-

S

-

A

-

K

P

L

P

S

E

D

D

R

S

K

H

C

L

R

E

A

Q

F

I

M

V

E

R

M

L

L

I

E

S

R

E

S

S

R

K

P

P

L

V

L

L

Y

Y

V

V

G
|
G

V

C

V

L

S

N

G

-

E

-

A

S

H

S

Q

D

E

E

L

L

R

G

D

R

F

F

A

V

H

E

T

L

F

T

G

G

I

I

P

P

V

V

V

A

S

S

T
|
T

L
|
L

M
|
M

G

G

L

L

G

G

A

S

V

Y

D

P

T

C

T

D

D

D

D

E

L

L

Y

S

L

L

G

H

M

M

L
|
L

G

G

M
|
M

H

H

G

G

T

T

A

V

Y

Y

A

A

N

N

Y

Y

A

A

V

V

E

E

D

H

C

S

D

D

F

L

L

L

I

L

A

A

V

F

G
|
G

A

V

R
|
R

F

F

D
|
D

D

D

R
|
R

V
|
V

A

T

G

G

K

K

V

L

E

E

E

A

F

F

A

A

P

S

L

R

A

A

E

-

Q

K

I

I

A

V

H

H

I

I

D
|
D

I
|
I

D

D

A

S

A

A

E

E

I

I

G

G

K

K

V

N

K

K

G

T

V

P

D

H

W

V

A

S

H

V

V

C

G

G

E
x
D

A
x
V

G

K

R

L

S

A

L

L

R

Q

Q

G

L

M

L

N

R

K

Y

V

G

L

E

E

S

N

M

R

G

A

F

E

E

E

P

L

R

K

F

L

D

D

-

F

-

G

A

V

W

W

L

R

E

N

H

E

V

L

R

N

G

V

L

Q

R

K

E

Q

R

K

H

F

P

P

M

L

D

S

Y

F

D

K

R

T

D

F

S

G

A

E

L

A

I

I

Q

P

P

P

H

Q

Y

Y

V

A

L

I

E

K

K

V

L

L

N

D

E

E

L

L

T

T

A

D

G

G

E

K

A

A

I

I

A

S

T

T

G

G

V
|
V

G
|
G

Q
|
Q

H
|
H

Q
|
Q

M
|
M

W

W

A

A

Q

Q

Y

F

C

Y

D

N

F

Y

R

K

G

K

P

P

R

R

Q

Q

W

W

L

L

T

S

S

S

G
|
G

G

G

L

L

G
|
G

T

A

M
|
M

G

G

F

F

G

G

L

L

P

P

A

A

I

I

G

G

A

A

Y

S

L

V

G

A

R

N

P

P

D

D

R

A

V

I

V

V

I

V

D

D

V

I

D

D

G

G

D
|
D

G
|
G

S
|
S

L

F

R

I

M

M

N

N

L

V

G

Q

E

E

L

L

E

A

T

T

A

I

T

R

T

V

Y

E

N

N

L

L

P

P

V

V

K

K

I

V

L

L

S

L

L

L

N

N

N
|
N

V

Q

G
x
H

D
x
L

G
|
G

M
|
M

V
|
V

R

M

Q

Q

W
|
W

Q

E

-

D

K

R

L

F

Y

Y

F

K

G

A

D

N

R

R

-

A

-

H

-

T

F

F

S

L

G

G

S

D

D

P

K

A

S

Q

L

E

H

D

R

E

-

I

-

F

K

P

D

N

F

M

I

L

K

L

A

F

A

A

E

A

A

A

D

C

G

G

Y

I

E

P

F

-

A

A

R

A

R

R

V

V

A

T

D

K

K

K

E

A

E

D

L

L

E

R

E

E

A

A

L

I

R

Q

A

T

F

M

V

L

E

D

F

T

P

P

G

G

P

P

A

Y

F

L

L

L

E

D

V

V

M

I

I

C

D

P

P
x
H

D

Q

A

E

G

H

V

V

F

L

P

P

M

M

V

I

G

P

P
x
S

G

G

S

G

S

T

Y

F

K

N

E

D

M

V

V

I

T

T

active site: Y33 (= Y45), G35 (= G47), G36 (= G48), A37 (= A49), S38 (≠ I50), E59 (= E84), T82 (= T107), F121 (= F146), Q122 (= Q147), E123 (= E148), K171 (= K196), M266 (= M297), V293 (= V324), V400 (= V430), G426 (= G456), M428 (= M458), D453 (= D483), N480 (= N510), H482 (≠ G512), L483 (≠ D513), M485 (= M515), V486 (= V516), W489 (= W519), H558 (≠ P583)
binding 2-chloranyl-6-(4,6-dimethoxypyrimidin-2-yl)sulfanyl-benzoic acid: M266 (= M297), R292 (= R323), W489 (= W519), S568 (≠ P593)
binding flavin-adenine dinucleotide: R161 (= R186), G222 (= G251), G223 (= G252), G224 (= G253), T246 (= T277), L247 (= L278), M248 (= M279), L264 (= L295), G286 (= G317), R288 (= R319), D290 (= D321), V293 (= V324), D310 (= D342), I311 (= I343), D329 (≠ E361), V330 (≠ A362), Q404 (= Q434), M405 (= M435), G423 (= G453)
binding magnesium ion: D453 (= D483), N480 (= N510), H482 (≠ G512)
binding (3z)-4-{[(4-amino-2-methylpyrimidin-5-yl)methyl]amino}-3-mercaptopent-3-en-1-yl trihydrogen diphosphate: V400 (= V430), G401 (= G431), Q402 (= Q432), H403 (= H433), M428 (= M458), D453 (= D483), G454 (= G484), S455 (= S485), N480 (= N510), H482 (≠ G512), L483 (≠ D513), G484 (= G514), M485 (= M515), V486 (= V516)

5k3sA Crystal structure of arabidopsis thaliana acetohydroxyacid synthase in complex with a pyrimidinyl-benzoate herbicide, bispyribac-sodium (see paper)
45% identity, 92% coverage: 26:602/628 of query aligns to 14:577/583 of 5k3sA

query
sites
5k3sA

G

G

G

A

E

D

I

I

I

L

V

V

E

E

V

A

L

L

A

E

Q

R

E

Q

G

G

V

V

D

E

T

T

L

V

F

F

G

A

Y
|
Y

S

P

G
|
G

A
|
A

I
x
S

L

M

P

E

T

I

Y

H

D

-

A

-

I

-

F

-

K

-

Y

-

N

-

E

-

R

-

H

-

R

-

K

-

E

-

Q

Q

A

A

V

L

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I

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A

A

A

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G

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A

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A

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A

A

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I

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I

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x
V

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-

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W

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M

G

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G

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A

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I

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E

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N

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K

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L

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L

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N
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x
H

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x
L

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G

M
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M

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V

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W

Q

E

-

D

K

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Y

Y

F

K

G

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N

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R

-

A

-

H

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F

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G

G

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D

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K

A

S

Q

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E

-

I

-

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K

P

D

N

F

M

I

L

K

L

A

F

A

A

E

A

A

A

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C

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G

Y

I

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F

-

A

A

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A

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V

V

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K

K

E

A

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L

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G

G

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P

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F

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L

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H

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T

active site: Y33 (= Y45), G35 (= G47), G36 (= G48), A37 (= A49), S38 (≠ I50), E59 (= E84), T82 (= T107), F121 (= F146), Q122 (= Q147), E123 (= E148), K171 (= K196), M266 (= M297), V293 (= V324), V400 (= V430), G426 (= G456), M428 (= M458), D453 (= D483), N480 (= N510), H482 (≠ G512), L483 (≠ D513), M485 (= M515), V486 (= V516), W489 (= W519), H558 (≠ P583)
binding 2,6-bis[(4,6-dimethoxypyrimidin-2-yl)oxy]benzoic acid: R292 (= R323), M485 (= M515), W489 (= W519), G569 (= G594)
binding flavin-adenine dinucleotide: R161 (= R186), G222 (= G251), G223 (= G252), G224 (= G253), T246 (= T277), L247 (= L278), M248 (= M279), L264 (= L295), M266 (= M297), G286 (= G317), R288 (= R319), D290 (= D321), V293 (= V324), D310 (= D342), I311 (= I343), D329 (≠ E361), V330 (≠ A362), M405 (= M435), G423 (= G453)
binding magnesium ion: D453 (= D483), N480 (= N510), H482 (≠ G512)
binding (3z)-4-{[(4-amino-2-methylpyrimidin-5-yl)methyl]amino}-3-mercaptopent-3-en-1-yl trihydrogen diphosphate: V400 (= V430), G401 (= G431), Q402 (= Q432), H403 (= H433), G426 (= G456), M428 (= M458), D453 (= D483), G454 (= G484), S455 (= S485), N480 (= N510), H482 (≠ G512), L483 (≠ D513), G484 (= G514), M485 (= M515), V486 (= V516)

8et4A Crystal structure of wild-type arabidopsis thaliana acetohydroxyacid synthase in complex with amidosulfuron (see paper)
45% identity, 92% coverage: 26:602/628 of query aligns to 14:577/582 of 8et4A

query
sites
8et4A

G

G

G

A

E

D

I

I

I

L

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E

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A

L

L

A

E

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G

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Y

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G

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A

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Q

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R

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N

G

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Y

Y

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L

G

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H

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A

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Y

A

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N

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Y

A

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x
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E

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I

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F

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-

F

-

G

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W

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F

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E

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H

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G

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M

G

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F

G

G

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L

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P

A

A

I

I

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A

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S

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G

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N

P

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D

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M

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N

L

V

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x
Q

E

E

L

L

E

A

T

T

A

I

T

R

T

V

Y

E

N

N

L

L

P

P

V

V

K

K

I

V

L

L

S

L

L

L

N

N

N
|
N

V

Q

G
x
H

D
x
L

G
|
G

M
|
M

V
|
V

R

M

Q

Q

W
|
W

Q

E

-

D

K

R

L

F

Y

Y

F

K

G

A

D

N

R

R

-

A

-

H

-

T

F

F

S

L

G

G

S

D

D

P

K

A

S

Q

L

E

H

D

R

E

-

I

-

F

K

P

D

N

F

M

I

L

K

L

A

F

A

A

E

A

A

A

D

C

G

G

Y

I

E

P

F

-

A

A

R

A

R

R

V

V

A

T

D

K

K
|
K

E

A

E

D

L

L

E

R

E

E

A

A

L

I

R

Q

A

T

F

M

V

L

E

D

F

T

P

P

G

G

P

P

A

Y

F

L

L

L

E

D

V

V

M

I

I

C

D

P

P

H

D

Q

A

E

G

H

V

V

F

L

P

P

M

M

V

I

G

P

P
x
S

G

G

S

G

S

T

Y

F

K

N

E

D

M

V

V

I

T

T

binding 2-[3-[(4-azanyl-2-methyl-pyrimidin-5-yl)methyl]-2-[(1~{S})-1-(dioxidanyl)-1-oxidanyl-ethyl]-4-methyl-1,3-thiazol-5-yl]ethyl phosphono hydrogen phosphate: V400 (= V430), G401 (= G431), Q402 (= Q432), H403 (= H433), G426 (= G456), M428 (= M458), G452 (= G482), D453 (= D483), G454 (= G484), S455 (= S485), M458 (= M488), N480 (= N510), H482 (≠ G512), L483 (≠ D513), G484 (= G514), M485 (= M515), V486 (= V516)
binding flavin-adenine dinucleotide: R161 (= R186), G222 (= G251), G223 (= G252), G224 (= G253), T246 (= T277), L247 (= L278), M248 (= M279), L264 (= L295), M266 (= M297), H267 (= H298), G286 (= G317), V287 (≠ A318), R288 (= R319), D290 (= D321), R292 (= R323), V293 (= V324), D310 (= D342), I311 (= I343), D329 (≠ E361), V330 (≠ A362), M405 (= M435), G423 (= G453)
binding magnesium ion: F370 (≠ Y400), D453 (= D483), M458 (= M488), Q461 (≠ G491), N480 (= N510), H482 (≠ G512), K533 (= K558)
binding N-{[(4,6-dimethoxypyrimidin-2-yl)carbamoyl]sulfamoyl}-N-methylmethanesulfonamide: M266 (= M297), R292 (= R323), M485 (= M515), W489 (= W519), S568 (≠ P593)

5wj1A Crystal structure of arabidopsis thaliana acetohydroxyacid synthase in complex with a triazolopyrimidine herbicide, penoxsulam (see paper)
45% identity, 92% coverage: 26:602/628 of query aligns to 14:577/582 of 5wj1A

query
sites
5wj1A

G

G

G

A

E

D

I

I

I

L

V

V

E

E

V

A

L

L

A

E

Q

R

E

Q

G

G

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E

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T

L

V

F

F

G

A

Y
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Y

S

P

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G

A
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I
x
S

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Y

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I

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F

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Y

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R

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I

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D

I
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I

D

D

A

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A

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E

I

I

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x
D

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x
V

G

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Q

G

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N

M

R

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A

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P

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F

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-

F

-

G

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D

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Y

Y

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D

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E

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V

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G

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H

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W

A

A

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Y

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G

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M

G

G

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G

G

L

L

P

P

A

A

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I

G

G

A

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P

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N

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Q

E

E

L

L

E

A

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A

I

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T

V

Y

E

N

N

L

L

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P

V

V

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K

I

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L

L

L

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N
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M

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V

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W
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-

D

K

R

L

F

Y

Y

F

K

G

A

D

N

R

R

-

A

-

H

-

T

F

F

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G

G

S

D

D

P

K

A

S

Q

L

E

H

D

R

E

-

I

-

F

K

P

D

N

F

M

I

L

K

L

A

F

A

A

E

A

A

A

D

C

G

G

Y

I

E

P

F

-

A

A

R

A

R

R

V

V

A

T

D

K

K

K

E

A

E

D

L

L

E

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E

E

A

A

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A

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F

M

V

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E

D

F

T

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P

G

G

P

P

A

Y

F

L

L

L

E

D

V

V

M

I

I

C

D

P

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x
H

D

Q

A

E

G

H

V

V

F

L

P

P

M

M

V

I

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x
S

G

G

S

G

S

T

Y

F

K

N

E

D

M

V

V

I

T

T

active site: Y33 (= Y45), G35 (= G47), G36 (= G48), A37 (= A49), S38 (≠ I50), E59 (= E84), T82 (= T107), F121 (= F146), Q122 (= Q147), E123 (= E148), K171 (= K196), M266 (= M297), V293 (= V324), V400 (= V430), G426 (= G456), M428 (= M458), D453 (= D483), N480 (= N510), H482 (≠ G512), L483 (≠ D513), M485 (= M515), V486 (= V516), W489 (= W519), H558 (≠ P583)
binding flavin-adenine dinucleotide: R161 (= R186), G222 (= G251), G223 (= G252), G224 (= G253), T246 (= T277), L247 (= L278), M248 (= M279), M263 (= M294), L264 (= L295), G286 (= G317), R288 (= R319), V293 (= V324), D310 (= D342), I311 (= I343), D329 (≠ E361), V330 (≠ A362), M405 (= M435), G423 (= G453), G424 (= G454)
binding magnesium ion: D453 (= D483), N480 (= N510), H482 (≠ G512)
binding 2-(2,2-difluoroethoxy)-N-(5,8-dimethoxy[1,2,4]triazolo[1,5-c]pyrimidin-2-yl)-6-(trifluoromethyl)benzenesulfonamide: M266 (= M297), D291 (= D322), R292 (= R323), M485 (= M515), W489 (= W519), S568 (≠ P593)
binding (3z)-4-{[(4-amino-2-methylpyrimidin-5-yl)methyl]amino}-3-mercaptopent-3-en-1-yl trihydrogen diphosphate: V400 (= V430), G401 (= G431), Q402 (= Q432), H403 (= H433), M428 (= M458), D453 (= D483), G454 (= G484), S455 (= S485), M458 (= M488), N480 (= N510), H482 (≠ G512), L483 (≠ D513), G484 (= G514), M485 (= M515), V486 (= V516)

5k6tA Crystal structure of arabidopsis thaliana acetohydroxyacid synthase in complex with a sulfonylamino-carbonyl-triazolinone herbicide, propoxycarbazone-sodium (see paper)
45% identity, 92% coverage: 26:602/628 of query aligns to 14:577/582 of 5k6tA

query
sites
5k6tA

G

G

G

A

E

D

I

I

I

L

V

V

E

E

V

A

L

L

A

E

Q

R

E

Q

G

G

V

V

D

E

T

T

L

V

F

F

G

A

Y
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Y

S

P

G
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G

A
|
A

I
x
S

L

M

P

E

T

I

Y

H

D

-

A

-

I

-

F

-

K

-

Y

-

N

-

E

-

R

-

H

-

R

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K

-

E

-

Q

Q

A

A

V

L

E

T

E

R

E

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D

S

P

S

I

I

R

R

L

N

I

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V

L

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A

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E
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E

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Q

G

G

A

G

G

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F

F

M

A

A

A

A

E

G

G

Y

Y

A

A

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R

A

S

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S

G

G

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K

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G

G

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C

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T
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T

S

S

G

G

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P

G

G

A

A

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T

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N

T

L

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P

G

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C

A

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A

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A

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R

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H

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K

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I
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I

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A

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G

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G

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L

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P

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A

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I

G

G

A

A

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V

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I

V

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D

V

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D

D

G
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G

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S
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S

L

F

R

I

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M

N

N

L

V

G

Q

E

E

L

L

E

A

T

T

A

I

T

R

T

V

Y

E

N

N

L

L

P

P

V

V

K

K

I

V

L

L

S

L

L

L

N

N

N
|
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V

Q

G
x
H

D
x
L

G
|
G

M
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M

V
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V

R

M

Q

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W
|
W

Q

E

-

D

K

R

L

F

Y

Y

F

K

G

A

D

N

R

R

-

A

-

H

-

T

F

F

S

L

G

G

S

D

D

P

K

A

S

Q

L

E

H

D

R

E

-

I

-

F

K

P

D

N

F

M

I

L

K

L

A

F

A

A

E

A

A

A

D

C

G

G

Y

I

E

P

F

-

A

A

R

A

R

R

V

V

A

T

D

K

K

K

E

A

E

D

L

L

E

R

E

E

A

A

L

I

R

Q

A

T

F

M

V

L

E

D

F

T

P

P

G

G

P

P

A

Y

F

L

L

L

E

D

V

V

M

I

I

C

D

P

P
x
H

D

Q

A

E

G

H

V

V

F

L

P

P

M

M

V

I

G

P

P
x
S

G

G

S

G

S

T

Y

F

K

N

E

D

M

V

V

I

T

T

active site: Y33 (= Y45), G35 (= G47), G36 (= G48), A37 (= A49), S38 (≠ I50), E59 (= E84), T82 (= T107), F121 (= F146), Q122 (= Q147), E123 (= E148), K171 (= K196), M266 (= M297), V293 (= V324), V400 (= V430), G426 (= G456), M428 (= M458), D453 (= D483), N480 (= N510), H482 (≠ G512), L483 (≠ D513), M485 (= M515), V486 (= V516), W489 (= W519), H558 (≠ P583)
binding methyl 2-[(4-methyl-5-oxidanylidene-3-propoxy-1,2,4-triazol-1-yl)carbonylsulfamoyl]benzoate: H267 (= H298), R292 (= R323), M485 (= M515), W489 (= W519), S568 (≠ P593)
binding flavin-adenine dinucleotide: R161 (= R186), G222 (= G251), G223 (= G252), G224 (= G253), T246 (= T277), L247 (= L278), M248 (= M279), L264 (= L295), G286 (= G317), R288 (= R319), D290 (= D321), R292 (= R323), V293 (= V324), D310 (= D342), I311 (= I343), D329 (≠ E361), V330 (≠ A362), Q404 (= Q434), M405 (= M435), G423 (= G453)
binding magnesium ion: D453 (= D483), N480 (= N510), H482 (≠ G512)
binding 2-{3-[(4-amino-2-methylpyrimidin-5-yl)methyl]-4-methyl-2-oxo-2,3-dihydro-1,3-thiazol-5-yl}ethyl trihydrogendiphosphate: V400 (= V430), G401 (= G431), Q402 (= Q432), H403 (= H433), G426 (= G456), M428 (= M458), G452 (= G482), G454 (= G484), S455 (= S485), N480 (= N510), H482 (≠ G512), L483 (≠ D513), G484 (= G514)

5k6rA Crystal structure of arabidopsis thaliana acetohydroxyacid synthase in complex with a sulfonylamino-carbonyl-triazolinone herbicide, thiencarbazone-methyl (see paper)
45% identity, 92% coverage: 26:602/628 of query aligns to 14:577/582 of 5k6rA

query
sites
5k6rA

G

G

G

A

E

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I

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I

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active site: Y33 (= Y45), G35 (= G47), G36 (= G48), A37 (= A49), S38 (≠ I50), E59 (= E84), T82 (= T107), F121 (= F146), Q122 (= Q147), E123 (= E148), K171 (= K196), M266 (= M297), V293 (= V324), V400 (= V430), G426 (= G456), M428 (= M458), D453 (= D483), N480 (= N510), H482 (≠ G512), L483 (≠ D513), M485 (= M515), V486 (= V516), W489 (= W519), H558 (≠ P583)
binding methyl 4-[(3-methoxy-4-methyl-5-oxidanylidene-1,2,4-triazol-1-yl)carbonylsulfamoyl]-5-methyl-thiophene-3-carboxylate: R292 (= R323), W489 (= W519), S568 (≠ P593)
binding flavin-adenine dinucleotide: R161 (= R186), G222 (= G251), G223 (= G252), G224 (= G253), T246 (= T277), L247 (= L278), M248 (= M279), L264 (= L295), M266 (= M297), G286 (= G317), R288 (= R319), R292 (= R323), V293 (= V324), D310 (= D342), I311 (= I343), G328 (= G360), D329 (≠ E361), V330 (≠ A362), M405 (= M435), G423 (= G453)
binding magnesium ion: D453 (= D483), N480 (= N510), H482 (≠ G512)
binding 2-{3-[(4-amino-2-methylpyrimidin-5-yl)methyl]-4-methyl-2-oxo-2,3-dihydro-1,3-thiazol-5-yl}ethyl trihydrogendiphosphate: V400 (= V430), G401 (= G431), Q402 (= Q432), H403 (= H433), G426 (= G456), M428 (= M458), D453 (= D483), G454 (= G484), S455 (= S485), M458 (= M488), N480 (= N510), H482 (≠ G512), L483 (≠ D513), G484 (= G514), M485 (= M515), V486 (= V516)

1z8nA Crystal structure of arabidopsis thaliana acetohydroxyacid synthase in complex with an imidazolinone herbicide, imazaquin (see paper)
45% identity, 92% coverage: 26:602/628 of query aligns to 14:577/582 of 1z8nA

query
sites
1z8nA

G

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F

L

P

P

M

M

V

I

G

P

P

S

G
|
G

S

G

S

T

Y

F

K

N

E

D

M

V

V

I

T

T

active site: Y33 (= Y45), G35 (= G47), G36 (= G48), A37 (= A49), S38 (≠ I50), E59 (= E84), T82 (= T107), F121 (= F146), Q122 (= Q147), E123 (= E148), K171 (= K196), M266 (= M297), V293 (= V324), V400 (= V430), G426 (= G456), M428 (= M458), D453 (= D483), N480 (= N510), H482 (≠ G512), L483 (≠ D513), M485 (= M515), V486 (= V516), W489 (= W519), H558 (≠ P583)
binding 2-(4-isopropyl-4-methyl-5-oxo-4,5-dihydro-1h-imidazol-2-yl)quinoline-3-carboxylic acid: K135 (= K160), R161 (= R186), Y191 (= Y216), R194 (= R219), D291 (= D322), R292 (= R323), D312 (= D344), W489 (= W519), G569 (= G594)
binding flavin-adenine dinucleotide: R161 (= R186), G222 (= G251), G224 (= G253), T246 (= T277), L247 (= L278), M248 (= M279), L264 (= L295), G265 (= G296), M266 (= M297), H267 (= H298), G286 (= G317), V287 (≠ A318), R288 (= R319), D290 (= D321), R292 (= R323), V293 (= V324), D310 (= D342), I311 (= I343), D329 (≠ E361), V330 (≠ A362), M405 (= M435), G423 (= G453), G424 (= G454)
binding magnesium ion: D453 (= D483), N480 (= N510)
binding thiamine diphosphate: V400 (= V430), G401 (= G431), Q402 (= Q432), H403 (= H433), G426 (= G456), M428 (= M458), G452 (= G482), G454 (= G484), S455 (= S485), N480 (= N510), H482 (≠ G512), L483 (≠ D513), G484 (= G514), M485 (= M515), V486 (= V516)

1yi1A Crystal structure of arabidopsis thaliana acetohydroxyacid synthase in complex with a sulfonylurea herbicide, tribenuron methyl (see paper)
45% identity, 92% coverage: 26:602/628 of query aligns to 14:577/582 of 1yi1A

query
sites
1yi1A

G

G

G

A

E

D

I

I

I

L

V

V

E

E

V

A

L

L

A

E

Q

R

E

Q

G

G

V

V

D

E

T

T

L

V

F

F

G

A

Y
|
Y

S

P

G
|
G

A
|
A

I
x
S

L

M

P

E

T

I

Y

H

D

-

A

-

I

-

F

-

K

-

Y

-

N

-

E

-

R

-

H

-

R

-

K

-

E

-

Q

Q

A

A

V

L

E

T

E

R

E

S

D

S

P

S

I

I

R

R

L

N

I

V

V

L

P

P

A

R

N

H

E
|
E

Q

Q

G

G

A

G

G

V

F

F

M

A

A

A

A

E

G

G

Y

Y

A

A

R

R

A

S

T

S

G

G

K

K

V

P

G

G

C

I

F

C

L

I

V

A

T
|
T

S

S

G

G

P

P

G

G

A

A

T

T

N

N

T

L

V

V

T

S

P

G

I

L

R

A

D

D

C

A

M

L

A

L

D

D

S

S

V

V

P

P

V

L

V

V

A

A

I

I

T

T

G

G

Q

Q

V

V

P

P

T

R

H

R

A

M

M

I

G

G

T

T

D

D

A

A

F
|
F

Q
|
Q

E
|
E

A

T

P

P

I

I

V

V

N

E

I

V

M

T

G

R

S

S

C

I

A

T

K

K

H

H

V

N

F

Y

L

L

V

V

T

M

D

D

P

V

E

E

Q

D

L

I

E

P

A

R

T

I

V

I

R

E

T

E

A

A

F

F

E

F

V

L

A

A

R

T

S

S

G

G

R
|
R

P

P

G

G

P

P

V

V

V

L

V

V

D

D

V

V

P

P

K
|
K

N

D

M

I

Q

Q

N

Q

W

Q

I

L

G

A

E

I

F

P

R

N

G

W

E

E

G

Q

V

A

L

M

E

R

V

L

R

P

G

G

Y

Y

R

M

Q

S

R

R

M

M

E

P

S

K

L

-

R

-

S

-

A

-

K

P

L

P

S

E

D

D

R

S

K

H

C

L

R

E

A

Q

F

I

M

V

E

R

M

L

L

I

E

S

R

E

S

S

R

K

P

P

L

V

L

L

Y

Y

V

V

G

G

G
|
G

V

C

V

L

S

N

G

-

E

-

A

S

H

S

Q

D

E

E

L

L

R

G

D

R

F

F

A

V

H

E

T

L

F

T

G

G

I

I

P

P

V

V

V

A

S

S

T
|
T

L
|
L

M
|
M

G

G

L

L

G

G

A

S

V

Y

D

P

T

C

T

D

D

D

D

E

L

L

Y

S

L

L

G

H

M
|
M

L
|
L

G
|
G

M
|
M

H
|
H

G

G

T

T

A

V

Y

Y

A

A

N

N

Y

Y

A

A

V

V

E

E

D

H

C

S

D

D

F

L

L

L

I

L

A

A

V

F

G
|
G

A
x
V

R
|
R

F

F

D
|
D

R
|
R

V
|
V

A

T

G

G

K

K

V

L

E

E

E

A

F

F

A

A

P

S

L

R

A

A

E

-

Q

K

I

I

A

V

H

H

I

I

D
|
D

I
|
I

D

D

A

S

A

A

E

E

I

I

G

G

K

K

V

N

K

K

G

T

V

P

D

H

W

V

A

S

H

V

V

C

G

G

E
x
D

A
x
V

G

K

R

L

S

A

L

L

R

Q

Q

G

L

M

L

N

R

K

Y

V

G

L

E

E

S

N

M

R

G

A

F

E

E

E

P

L

R

K

F

L

D

D

-

F

-

G

A

V

W

W

L

R

E

N

H

E

V

L

R

N

G

V

L

Q

R

K

E

Q

R

K

H

F

P

P

M

L

D

S

Y

F

D

K

R

T

D

F

S

G

A

E

L

A

I

I

Q

P

P

P

H

Q

Y

Y

V

A

L

I

E

K

K

V

L

L

N

D

E

E

L

L

T

T

A

D

G

G

E

K

A

A

I

I

A

S

T

T

G

G

V
|
V

G

G

Q

Q

H

H

Q

Q

M
|
M

W

W

A

A

Q

Q

Y

F

C

Y

D

N

F

Y

R

K

G

K

P

P

R

R

Q

Q

W

W

L

L

T

S

S

S

G
|
G

L

L

G
|
G

T

A

M
|
M

G

G

F

F

G

G

L

L

P

P

A

A

I

I

G

G

A

A

Y

S

L

V

G

A

R

N

P

P

D

D

R

A

V

I

V

V

I

V

D

D

V

I

D

D

G

G

D
|
D

G

G

S

S

L

F

R

I

M

M

N

N

L

V

G

Q

E

E

L

L

E

A

T

T

A

I

T

R

T

V

Y

E

N

N

L

L

P

P

V

V

K

K

I

V

L

L

S

L

L

L

N

N

N
|
N

V

Q

G
x
H

D
x
L

G

G

M
|
M

V
|
V

R

M

Q

Q

W
|
W

Q

E

-

D

K

R

L

F

Y

Y

F

K

G

A

D

N

R

R

-

A

-

H

-

T

F

F

S

L

G

G

S

D

D

P

K

A

S

Q

L

E

H

D

R

E

-

I

-

F

K

P

D

N

F

M

I

L

K

L

A

F

A

A

E

A

A

A

D

C

G

G

Y

I

E

P

F

-

A

A

R

A

R

R

V

V

A

T

D

K

K

K

E

A

E

D

L

L

E

R

E

E

A

A

L

I

R

Q

A

T

F

M

V

L

E

D

F

T

P

P

G

G

P

P

A

Y

F

L

L

L

E

D

V

V

M

I

I

C

D

P

P
x
H

D

Q

A

E

G

H

V

V

F

L

P

P

M

M

V

I

G

P

P
x
S

G

G

S

G

S

T

Y

F

K

N

E

D

M

V

V

I

T

T

active site: Y33 (= Y45), G35 (= G47), G36 (= G48), A37 (= A49), S38 (≠ I50), E59 (= E84), T82 (= T107), F121 (= F146), Q122 (= Q147), E123 (= E148), K171 (= K196), M266 (= M297), V293 (= V324), V400 (= V430), G426 (= G456), M428 (= M458), D453 (= D483), N480 (= N510), H482 (≠ G512), L483 (≠ D513), M485 (= M515), V486 (= V516), W489 (= W519), H558 (≠ P583)
binding methyl 2-[4-methoxy-6-methyl-1,3,5-trazin-2-yl(methyl)carbamoylsulfamoyl]benzoate: D291 (= D322), R292 (= R323), W489 (= W519), S568 (≠ P593)
binding flavin-adenine dinucleotide: R161 (= R186), G223 (= G252), G224 (= G253), T246 (= T277), L247 (= L278), M248 (= M279), M263 (= M294), L264 (= L295), G265 (= G296), M266 (= M297), H267 (= H298), G286 (= G317), V287 (≠ A318), R288 (= R319), D290 (= D321), V293 (= V324), D310 (= D342), I311 (= I343), D329 (≠ E361), V330 (≠ A362), M405 (= M435), G423 (= G453), G424 (= G454)
binding magnesium ion: D453 (= D483), N480 (= N510), H482 (≠ G512)

1yi0A Crystal structure of arabidopsis thaliana acetohydroxyacid synthase in complex with a sulfonylurea herbicide, sulfometuron methyl (see paper)
45% identity, 92% coverage: 26:602/628 of query aligns to 14:577/582 of 1yi0A

query
sites
1yi0A

G

G

G

A

E

D

I

I

I

L

V

V

E

E

V

A

L

L

A

E

Q

R

E

Q

G

G

V

V

D

E

T

T

L

V

F

F

G

A

Y
|
Y

S

P

G
|
G

A
|
A

I
x
S

L

M

P

E

T

I

Y

H

D

-

A

-

I

-

F

-

K

-

Y

-

N

-

E

-

R

-

H

-

R

-

K

-

E

-

Q

Q

A

A

V

L

E

T

E

R

E

S

D

S

P

S

I

I

R

R

L

N

I

V

V

L

P

P

A

R

N

H

E
|
E

Q

Q

G

G

A

G

G

V

F

F

M

A

A

A

A

E

G

G

Y

Y

A

A

R

R

A

S

T

S

G

G

K

K

V

P

G

G

C

I

F

C

L

I

V

A

T
|
T

S

S

G

G

P

P

G

G

A

A

T

T

N

N

T

L

V

V

T

S

P

G

I

L

R

A

D

D

C

A

M

L

A

L

D

D

S

S

V

V

P

P

V

L

V

V

A

A

I

I

T

T

G

G

Q

Q

V

V

P

P

T

R

H

R

A

M

M

I

G

G

T

T

D

D

A

A

F
|
F

Q
|
Q

E
|
E

A

T

P

P

I

I

V

V

N

E

I

V

M

T

G

R

S

S

C

I

A

T

K

K

H

H

V

N

F

Y

L

L

V

V

T

M

D

D

P

V

E

E

Q

D

L

I

E

P

A

R

T

I

V

I

R

E

T

E

A

A

F

F

E

F

V

L

A

A

R

T

S

S

G

G

R
|
R

P

P

G

G

P

P

V

V

V

L

V

V

D

D

V

V

P

P

K
|
K

N

D

M

I

Q

Q

N

Q

W

Q

I

L

G

A

E

I

F

P

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N

G

W

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E

G

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A

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V

L

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G

G

Y

Y

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M

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M

M

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K

L

-

R

-

S

-

A

-

K

P

L

P

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D

D

R

S

K

H

C

L

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A

Q

F

I

M

V

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R

M

L

L

I

E

S

R

E

S

S

R

K

P

P

L

V

L

L

Y

Y

V

V

G
|
G

V

C

V

L

S

N

G

-

E

-

A

S

H

S

Q

D

E

E

L

L

R

G

D

R

F

F

A

V

H

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T

L

F

T

G

G

I

I

P

P

V

V

V

A

S

S

T
|
T

L
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L

M
|
M

G

G

L

L

G

G

A

S

V

Y

D

P

T

C

T

D

D

D

D

E

L

L

Y

S

L

L

G

H

M

M

L
|
L

G
|
G

M
|
M

H
|
H

G

G

T

T

A

V

Y

Y

A

A

N

N

Y

Y

A

A

V

V

E

E

D

H

C

S

D

D

F

L

L

L

I

L

A

A

V

F

G
|
G

A
x
V

R
|
R

F

F

D
|
D

R
|
R

V
|
V

A

T

G

G

K

K

V

L

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E

E

A

F

F

A

A

P

S

L

R

A

A

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-

Q

K

I

I

A

V

H

H

I

I

D
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D

I
|
I

D

D

A

S

A

A

E

E

I

I

G

G

K

K

V

N

K

K

G

T

V

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D

H

W

V

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S

H

V

V

C

G
|
G

E
x
D

A
x
V

G

K

R

L

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A

L

L

R

Q

Q

G

L

M

L

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Y

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N

M

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P

L

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L

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D

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F

-

G

A

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W

L

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N

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G

G

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I

I

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G

G

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V

G

G

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Q

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|
M

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W

A

A

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W

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G
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G

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L

G
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G

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M
|
M

G

G

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F

G

G

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L

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D

D

G

G

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|
D

G

G

S

S

L

F

R

I

M

M

N

N

L

V

G

Q

E

E

L

L

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A

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T

A

I

T

R

T

V

Y

E

N

N

L

L

P

P

V

V

K

K

I

V

L

L

S

L

L

L

N

N

N
|
N

V

Q

G
x
H

D
x
L

G

G

M
|
M

V
|
V

R

M

Q

Q

W
|
W

Q

E

-

D

K

R

L

F

Y

Y

F

K

G

A

D

N

R

R

-

A

-

H

-

T

F

F

S

L

G

G

S

D

D

P

K

A

S

Q

L

E

H

D

R

E

-

I

-

F

K

P

D

N

F

M

I

L

K

L

A

F

A

A

E

A

A

A

D

C

G

G

Y

I

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P

F

-

A

A

R

A

R

R

V

V

A

T

D

K

K

K

E

A

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D

L

L

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E

E

A

A

L

I

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A

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M

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L

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D

F

T

P

P

G

G

P

P

A

Y

F

L

L

L

E

D

V

V

M

I

I

C

D

P

P
x
H

D

Q

A

E

G

H

V

V

F

L

P

P

M

M

V

I

G

P

P
x
S

G

G

S

G

S

T

Y

F

K

N

E

D

M

V

V

I

T

T

active site: Y33 (= Y45), G35 (= G47), G36 (= G48), A37 (= A49), S38 (≠ I50), E59 (= E84), T82 (= T107), F121 (= F146), Q122 (= Q147), E123 (= E148), K171 (= K196), M266 (= M297), V293 (= V324), V400 (= V430), G426 (= G456), M428 (= M458), D453 (= D483), N480 (= N510), H482 (≠ G512), L483 (≠ D513), M485 (= M515), V486 (= V516), W489 (= W519), H558 (≠ P583)
binding methyl 2-[({[(4,6-dimethylpyrimidin-2-yl)amino]carbonyl}amino)sulfonyl]benzoate: D291 (= D322), R292 (= R323), W489 (= W519), S568 (≠ P593)
binding flavin-adenine dinucleotide: R161 (= R186), G222 (= G251), G223 (= G252), G224 (= G253), T246 (= T277), L247 (= L278), M248 (= M279), L264 (= L295), G265 (= G296), M266 (= M297), H267 (= H298), G286 (= G317), V287 (≠ A318), R288 (= R319), D290 (= D321), R292 (= R323), V293 (= V324), D310 (= D342), I311 (= I343), G328 (= G360), D329 (≠ E361), V330 (≠ A362), M405 (= M435), G423 (= G453), G424 (= G454)
binding magnesium ion: D453 (= D483), N480 (= N510), H482 (≠ G512)

1yhzA Crystal structure of arabidopsis thaliana acetohydroxyacid synthase in complex with a sulfonylurea herbicide, chlorsulfuron (see paper)
45% identity, 92% coverage: 26:602/628 of query aligns to 14:577/582 of 1yhzA

query
sites
1yhzA

G

G

G

A

E

D

I

I

I

L

V

V

E

E

V

A

L

L

A

E

Q

R

E

Q

G

G

V

V

D

E

T

T

L

V

F

F

G

A

Y
|
Y

S

P

G
|
G

A
|
A

I
x
S

L

M

P

E

T

I

Y

H

D

-

A

-

I

-

F

-

K

-

Y

-

N

-

E

-

R

-

H

-

R

-

K

-

E

-

Q

Q

A

A

V

L

E

T

E

R

E

S

D

S

P

S

I

I

R

R

L

N

I

V

V

L

P

P

A

R

N

H

E
|
E

Q

Q

G

G

A

G

G

V

F

F

M

A

A

A

A

E

G

G

Y

Y

A

A

R

R

A

S

T

S

G

G

K

K

V

P

G

G

C

I

F

C

L

I

V

A

T
|
T

S

S

G

G

P

P

G

G

A

A

T

T

N

N

T

L

V

V

T

S

P

G

I

L

R

A

D

D

C

A

M

L

A

L

D

D

S

S

V

V

P

P

V

L

V

V

A

A

I

I

T

T

G

G

Q

Q

V

V

P

P

T

R

H

R

A

M

M

I

G

G

T

T

D

D

A

A

F
|
F

Q
|
Q

E
|
E

A

T

P

P

I

I

V

V

N

E

I

V

M

T

G

R

S

S

C

I

A

T

K

K

H

H

V

N

F

Y

L

L

V

V

T

M

D

D

P

V

E

E

Q

D

L

I

E

P

A

R

T

I

V

I

R

E

T

E

A

A

F

F

E

F

V

L

A

A

R

T

S

S

G

G

R
|
R

P

P

G

G

P

P

V

V

V

L

V

V

D

D

V

V

P

P

K
|
K

N

D

M

I

Q

Q

N

Q

W

Q

I

L

G

A

E

I

F

P

R

N

G

W

E

E

G

Q

V

A

L

M

E

R

V

L

R

P

G

G

Y

Y

R

M

Q

S

R

R

M

M

E

P

S

K

L

-

R

-

S

-

A

-

K

P

L

P

S

E

D

D

R

S

K

H

C

L

R

E

A

Q

F

I

M

V

E

R

M

L

L

I

E

S

R

E

S

S

R

K

P

P

L

V

L

L

Y

Y

V

V

G

G

G
|
G

V

C

V

L

S

N

G

-

E

-

A

S

H

S

Q

D

E

E

L

L

R

G

D

R

F

F

A

V

H

E

T

L

F

T

G

G

I

I

P

P

V

V

V

A

S

S

T
|
T

L
|
L

M
|
M

G

G

L

L

G

G

A

S

V

Y

D

P

T

C

T

D

D

D

D

E

L

L

Y

S

L

L

G

H

M

M

L
|
L

G

G

M
|
M

H
|
H

G

G

T

T

A

V

Y

Y

A

A

N

N

Y

Y

A

A

V

V

E

E

D

H

C

S

D

D

F

L

L

L

I

L

A

A

V

F

G
|
G

A
x
V

R
|
R

F

F

D
|
D

R
|
R

V
|
V

A

T

G

G

K

K

V

L

E

E

E

A

F

F

A

A

P

S

L

R

A

A

E

-

Q

K

I

I

A

V

H

H

I

I

D
|
D

I
|
I

D

D

A

S

A

A

E

E

I

I

G

G

K

K

V

N

K

K

G

T

V

P

D

H

W

V

A

S

H

V

V

C

G

G

E
x
D

A
x
V

G

K

R

L

S

A

L

L

R

Q

Q

G

L

M

L

N

R

K

Y

V

G

L

E

E

S

N

M

R

G

A

F

E

E

E

P

L

R

K

F

L

D

D

-

F

-

G

A

V

W

W

L

R

E

N

H

E

V

L

R

N

G

V

L

Q

R

K

E

Q

R

K

H

F

P

P

M

L

D

S

Y

F

D

K

R

T

D

F

S

G

A

E

L

A

I

I

Q

P

P

P

H

Q

Y

Y

V

A

L

I

E

K

K

V

L

L

N

D

E

E

L

L

T

T

A

D

G

G

E

K

A

A

I

I

A

S

T

T

G

G

V
|
V

G

G

Q

Q

H

H

Q
|
Q

M
|
M

W

W

A

A

Q

Q

Y

F

C

Y

D

N

F

Y

R

K

G

K

P

P

R

R

Q

Q

W

W

L

L

T

S

S

S

G
|
G

L

L

G
|
G

T

A

M
|
M

G

G

F

F

G

G

L

L

P

P

A

A

I

I

G

G

A

A

Y

S

L

V

G

A

R

N

P

P

D

D

R

A

V

I

V

V

I

V

D

D

V

I

D

D

G

G

D
|
D

G

G

S

S

L

F

R

I

M

M

N

N

L

V

G

Q

E

E

L

L

E

A

T

T

A

I

T

R

T

V

Y

E

N

N

L

L

P

P

V

V

K

K

I

V

L

L

S

L

L

L

N

N

N
|
N

V

Q

G
x
H

D
x
L

G

G

M
|
M

V
|
V

R

M

Q

Q

W
|
W

Q

E

-

D

K

R

L

F

Y

Y

F

K

G

A

D

N

R

R

-

A

-

H

-

T

F

F

S

L

G

G

S

D

D

P

K

A

S

Q

L

E

H

D

R

E

-

I

-

F

K

P

D

N

F

M

I

L

K

L

A

F

A

A

E

A

A

A

D

C

G

G

Y

I

E

P

F

-

A

A

R

A

R

R

V

V

A

T

D

K

K

K

E

A

E

D

L

L

E

R

E

E

A

A

L

I

R

Q

A

T

F

M

V

L

E

D

F

T

P

P

G

G

P

P

A

Y

F

L

L

L

E

D

V

V

M

I

I

C

D

P

P
x
H

D

Q

A

E

G

H

V

V

F

L

P

P

M

M

V

I

G

P

P
x
S

G

G

S

G

S

T

Y

F

K

N

E

D

M

V

V

I

T

T

active site: Y33 (= Y45), G35 (= G47), G36 (= G48), A37 (= A49), S38 (≠ I50), E59 (= E84), T82 (= T107), F121 (= F146), Q122 (= Q147), E123 (= E148), K171 (= K196), M266 (= M297), V293 (= V324), V400 (= V430), G426 (= G456), M428 (= M458), D453 (= D483), N480 (= N510), H482 (≠ G512), L483 (≠ D513), M485 (= M515), V486 (= V516), W489 (= W519), H558 (≠ P583)
binding 1-(2-chlorophenylsulfonyl)-3-(4-methoxy-6-methyl-l,3,5-triazin-2-yl)urea: D291 (= D322), R292 (= R323), M485 (= M515), W489 (= W519), S568 (≠ P593)
binding flavin-adenine dinucleotide: R161 (= R186), G223 (= G252), G224 (= G253), T246 (= T277), L247 (= L278), M248 (= M279), L264 (= L295), M266 (= M297), H267 (= H298), G286 (= G317), V287 (≠ A318), R288 (= R319), D290 (= D321), V293 (= V324), D310 (= D342), I311 (= I343), D329 (≠ E361), V330 (≠ A362), Q404 (= Q434), M405 (= M435), G423 (= G453), G424 (= G454)
binding magnesium ion: D453 (= D483), N480 (= N510), H482 (≠ G512)

1yhyA Crystal structure of arabidopsis thaliana acetohydroxyacid synthase in complex with a sulfonylurea herbicide, metsulfuron methyl (see paper)
45% identity, 92% coverage: 26:602/628 of query aligns to 14:577/582 of 1yhyA

query
sites
1yhyA

G

G

G

A

E

D

I

I

I

L

V

V

E

E

V

A

L

L

A

E

Q

R

E

Q

G

G

V

V

D

E

T

T

L

V

F

F

G

A

Y
|
Y

S

P

G
|
G

A
|
A

I
x
S

L

M

P

E

T

I

Y

H

D

-

A

-

I

-

F

-

K

-

Y

-

N

-

E

-

R

-

H

-

R

-

K

-

E

-

Q

Q

A

A

V

L

E

T

E

R

E

S

D

S

P

S

I

I

R

R

L

N

I

V

V

L

P

P

A

R

N

H

E
|
E

Q

Q

G

G

A

G

G

V

F

F

M

A

A

A

A

E

G

G

Y

Y

A

A

R

R

A

S

T

S

G

G

K

K

V

P

G

G

C

I

F

C

L

I

V

A

T
|
T

S

S

G

G

P

P

G

G

A

A

T

T

N

N

T

L

V

V

T

S

P

G

I

L

R

A

D

D

C

A

M

L

A

L

D

D

S

S

V

V

P

P

V

L

V

V

A

A

I

I

T

T

G

G

Q

Q

V

V

P

P

T

R

H

R

A

M

M

I

G

G

T

T

D

D

A

A

F
|
F

Q
|
Q

E
|
E

A

T

P

P

I

I

V

V

N

E

I

V

M

T

G

R

S

S

C

I

A

T

K

K

H

H

V

N

F

Y

L

L

V

V

T

M

D

D

P

V

E

E

Q

D

L

I

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P

A

R

T

I

V

I

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T

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A

A

F

F

E

F

V

L

A

A

R

T

S

S

G

G

R
|
R

P

P

G

G

P

P

V

V

V

L

V

V

D

D

V

V

P

P

K
|
K

N

D

M

I

Q

Q

N

Q

W

Q

I

L

G

A

E

I

F

P

R

N

G

W

E

E

G

Q

V

A

L

M

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R

V

L

R

P

G

G

Y

Y

R

M

Q

S

R

R

M

M

E

P

S

K

L

-

R

-

S

-

A

-

K

P

L

P

S

E

D

D

R

S

K

H

C

L

R

E

A

Q

F

I

M

V

E

R

M

L

L

I

E

S

R

E

S

S

R

K

P

P

L

V

L

L

Y

Y

V

V

G
|
G

V

C

V

L

S

N

G

-

E

-

A

S

H

S

Q

D

E

E

L

L

R

G

D

R

F

F

A

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H

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T

L

F

T

G

G

I

I

P

P

V

V

V

A

S

S

T
|
T

L
|
L

M
|
M

G

G

L

L

G

G

A

S

V

Y

D

P

T

C

T

D

D

D

D

E

L

L

Y

S

L

L

G

H

M

M

L
|
L

G
|
G

M
|
M

H
|
H

G

G

T

T

A

V

Y

Y

A

A

N

N

Y

Y

A

A

V

V

E

E

D

H

C

S

D

D

F

L

L

L

I

L

A

A

V

F

G
|
G

A
x
V

R
|
R

F

F

D
|
D

R
|
R

V
|
V

A

T

G

G

K

K

V

L

E

E

E

A

F

F

A

A

P

S

L

R

A

A

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-

Q

K

I

I

A

V

H

H

I

I

D
|
D

I
|
I

D

D

A

S

A

A

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E

I

I

G

G

K

K

V

N

K

K

G

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D

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W

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H

V

V

C

G

G

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x
D

A
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L

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F

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G

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W

W

L

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N

H

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G

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G

G

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A

I

I

A

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G

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V
|
V

G

G

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Q

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|
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|
G

L

L

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|
M

G

G

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M

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N

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N

L

L

P

P

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V

K

K

I

V

L

L

S

L

L

L

N

N

N
|
N

V

Q

G
x
H

D
x
L

G

G

M
|
M

V
|
V

R

M

Q

Q

W
|
W

Q

E

-

D

K

R

L

F

Y

Y

F

K

G

A

D

N

R

R

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A

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H

-

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F

F

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L

G

G

S

D

D

P

K

A

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Q

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D

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-

I

-

F

K

P

D

N

F

M

I

L

K

L

A

F

A

A

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A

A

A

D

C

G

G

Y

I

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-

A

A

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A

R

R

V

V

A

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D

K

K

K

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A

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D

L

L

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A

A

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P

G

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P

P

A

Y

F

L

L

L

E

D

V

V

M

I

I

C

D

P

P
x
H

D

Q

A

E

G

H

V

V

F

L

P

P

M

M

V

I

G

P

P
x
S

G

G

S

G

S

T

Y

F

K

N

E

D

M

V

V

I

T

T

active site: Y33 (= Y45), G35 (= G47), G36 (= G48), A37 (= A49), S38 (≠ I50), E59 (= E84), T82 (= T107), F121 (= F146), Q122 (= Q147), E123 (= E148), K171 (= K196), M266 (= M297), V293 (= V324), V400 (= V430), G426 (= G456), M428 (= M458), D453 (= D483), N480 (= N510), H482 (≠ G512), L483 (≠ D513), M485 (= M515), V486 (= V516), W489 (= W519), H558 (≠ P583)
binding methyl 2-[({[(4-methoxy-6-methyl-1,3,5-triazin-2-yl)amino]carbonyl}amino)sulfonyl]benzoate: D291 (= D322), R292 (= R323), V486 (= V516), W489 (= W519), S568 (≠ P593)
binding flavin-adenine dinucleotide: R161 (= R186), G222 (= G251), G223 (= G252), G224 (= G253), T246 (= T277), L247 (= L278), M248 (= M279), L264 (= L295), G265 (= G296), M266 (= M297), H267 (= H298), G286 (= G317), V287 (≠ A318), R288 (= R319), D290 (= D321), V293 (= V324), D310 (= D342), I311 (= I343), D329 (≠ E361), V330 (≠ A362), Q404 (= Q434), M405 (= M435), G423 (= G453), G424 (= G454)
binding magnesium ion: D453 (= D483), N480 (= N510), H482 (≠ G512)

1ybhA Crystal structure of arabidopsis thaliana acetohydroxyacid synthase in complex with a sulfonylurea herbicide chlorimuron ethyl (see paper)
45% identity, 92% coverage: 26:602/628 of query aligns to 14:577/582 of 1ybhA

query
sites
1ybhA

G

G

G

A

E

D

I

I

I

L

V

V

E

E

V

A

L

L

A

E

Q

R

E

Q

G

G

V

V

D

E

T

T

L

V

F

F

G

A

Y
|
Y

S

P

G
|
G

A
|
A

I
x
S

L

M

P

E

T

I

Y

H

D

-

A

-

I

-

F

-

K

-

Y

-

N

-

E

-

R

-

H

-

R

-

K

-

E

-

Q

Q

A

A

V

L

E

T

E

R

E

S

D

S

P

S

I

I

R

R

L

N

I

V

V

L

P

P

A

R

N

H

E
|
E

Q

Q

G

G

A

G

G

V

F

F

M

A

A

A

A

E

G

G

Y

Y

A

A

R

R

A

S

T

S

G

G

K

K

V

P

G

G

C

I

F

C

L

I

V

A

T
|
T

S

S

G

G

P

P

G

G

A

A

T

T

N

N

T

L

V

V

T

S

P

G

I

L

R

A

D

D

C

A

M

L

A

L

D

D

S

S

V

V

P

P

V

L

V

V

A

A

I

I

T

T

G

G

Q

Q

V

V

P

P

T

R

H

R

A

M

M

I

G

G

T

T

D

D

A

A

F
|
F

Q
|
Q

E
|
E

A

T

P

P

I

I

V

V

N

E

I

V

M

T

G

R

S

S

C

I

A

T

K

K

H

H

V

N

F

Y

L

L

V

V

T

M

D

D

P

V

E

E

Q

D

L

I

E

P

A

R

T

I

V

I

R

E

T

E

A

A

F

F

E

F

V

L

A

A

R

T

S

S

G

G

R
|
R

P

P

G

G

P

P

V

V

V

L

V

V

D

D

V

V

P

P

K
|
K

N

D

M

I

Q

Q

N

Q

W

Q

I

L

G

A

E

I

F

P

R

N

G

W

E

E

G

Q

V

A

L

M

E

R

V

L

R

P

G

G

Y

Y

R

M

Q

S

R

R

M

M

E

P

S

K

L

-

R

-

S

-

A

-

K

P

L

P

S

E

D

D

R

S

K

H

C

L

R

E

A

Q

F

I

M

V

E

R

M

L

L

I

E

S

R

E

S

S

R

K

P

P

L

V

L

L

Y

Y

V

V

G

G

G
|
G

V

C

V

L

S

N

G

-

E

-

A

S

H

S

Q

D

E

E

L

L

R

G

D

R

F

F

A

V

H

E

T

L

F

T

G

G

I

I

P

P

V

V

V

A

S

S

T
|
T

L
|
L

M
|
M

G

G

L

L

G

G

A

S

V

Y

D

P

T

C

T

D

D

D

D

E

L

L

Y

S

L

L

G

H

M

M

L
|
L

G

G

M
|
M

H
|
H

G

G

T

T

A

V

Y

Y

A

A

N

N

Y

Y

A

A

V

V

E

E

D

H

C

S

D

D

F

L

L

L

I

L

A

A

V

F

G
|
G

A
x
V

R
|
R

F

F

D
|
D

R
|
R

V
|
V

A

T

G

G

K

K

V

L

E

E

E

A

F

F

A

A

P

S

L

R

A

A

E

-

Q

K

I

I

A

V

H

H

I

I

D
|
D

I
|
I

D

D

A

S

A

A

E

E

I

I

G

G

K

K

V

N

K

K

G

T

V

P

D

H

W

V

A

S

H

V

V

C

G

G

E
x
D

A
x
V

G

K

R

L

S

A

L

L

R

Q

Q

G

L

M

L

N

R

K

Y

V

G

L

E

E

S

N

M

R

G

A

F

E

E

E

P

L

R

K

F

L

D

D

-

F

-

G

A

V

W

W

L

R

E

N

H

E

V

L

R

N

G

V

L

Q

R

K

E

Q

R

K

H

F

P

P

M

L

D

S

Y

F

D

K

R

T

D

F

S

G

A

E

L

A

I

I

Q

P

P

P

H

Q

Y

Y

V

A

L

I

E

K

K

V

L

L

N

D

E

E

L

L

T

T

A

D

G

G

E

K

A

A

I

I

A

S

T

T

G

G

V
|
V

G

G

Q

Q

H

H

Q
|
Q

M
|
M

W

W

A

A

Q

Q

Y

F

C

Y

D

N

F

Y

R

K

G

K

P

P

R

R

Q

Q

W

W

L

L

T

S

S

S

G
|
G

L

L

G
|
G

T

A

M
|
M

G

G

F

F

G

G

L

L

P

P

A

A

I

I

G

G

A

A

Y

S

L

V

G

A

R

N

P

P

D

D

R

A

V

I

V

V

I

V

D

D

V

I

D

D

G

G

D
|
D

G

G

S

S

L

F

R

I

M

M

N

N

L

V

G

Q

E

E

L

L

E

A

T

T

A

I

T

R

T

V

Y

E

N

N

L

L

P

P

V

V

K

K

I

V

L

L

S

L

L

L

N

N

N
|
N

V

Q

G
x
H

D
x
L

G

G

M
|
M

V
|
V

R

M

Q

Q

W
|
W

Q

E

-

D

K

R

L

F

Y

Y

F

K

G

A

D

N

R

R

-

A

-

H

-

T

F

F

S

L

G

G

S

D

D

P

K

A

S

Q

L

E

H

D

R

E

-

I

-

F

K

P

D

N

F

M

I

L

K

L

A

F

A

A

E

A

A

A

D

C

G

G

Y

I

E

P

F

-

A

A

R

A

R

R

V

V

A

T

D

K

K

K

E

A

E

D

L

L

E

R

E

E

A

A

L

I

R

Q

A

T

F

M

V

L

E

D

F

T

P

P

G

G

P

P

A

Y

F

L

L

L

E

D

V

V

M

I

I

C

D

P

P
x
H

D

Q

A

E

G

H

V

V

F

L

P

P

M

M

V

I

G

P

P
x
S

G

G

S

G

S

T

Y

F

K

N

E

D

M

V

V

I

T

T

active site: Y33 (= Y45), G35 (= G47), G36 (= G48), A37 (= A49), S38 (≠ I50), E59 (= E84), T82 (= T107), F121 (= F146), Q122 (= Q147), E123 (= E148), K171 (= K196), M266 (= M297), V293 (= V324), V400 (= V430), G426 (= G456), M428 (= M458), D453 (= D483), N480 (= N510), H482 (≠ G512), L483 (≠ D513), M485 (= M515), V486 (= V516), W489 (= W519), H558 (≠ P583)
binding 2-[[[[(4-chloro-6-methoxy-2-pyrimidinyl)amino]carbonyl]amino]sulfonyl]benzoic acid ethyl ester: M266 (= M297), D291 (= D322), R292 (= R323), M485 (= M515), W489 (= W519), S568 (≠ P593)
binding flavin-adenine dinucleotide: R161 (= R186), G223 (= G252), G224 (= G253), T246 (= T277), L247 (= L278), M248 (= M279), L264 (= L295), M266 (= M297), H267 (= H298), G286 (= G317), V287 (≠ A318), R288 (= R319), D290 (= D321), V293 (= V324), D310 (= D342), I311 (= I343), D329 (≠ E361), V330 (≠ A362), Q404 (= Q434), M405 (= M435), G423 (= G453), G424 (= G454)
binding magnesium ion: D453 (= D483), N480 (= N510), H482 (≠ G512)

3ea4A Arabidopsis thaliana acetohydroxyacid synthase in complex with monosulfuron-ester (see paper)
44% identity, 92% coverage: 26:602/628 of query aligns to 13:576/582 of 3ea4A

query
sites
3ea4A

G

G

G

A

E

D

I

I

I

L

V

V

E

E

V

A

L

L

A

E

Q

R

E

Q

G

G

V

V

D

E

T

T

L

V

F

F

G

A

Y
|
Y

S

P

G
|
G

A
|
A

I
x
S

L

M

P

E

T

I

Y

H

D

-

A

-

I

-

F

-

K

-

Y

-

N

-

E

-

R

-

H

-

R

-

K

-

E

-

Q

Q

A

A

V

L

E

T

E

R

E

S

D

S

P

S

I

I

R

R

L

N

I

V

V

L

P

P

A

R

N

H

E
|
E

Q

Q

G

G

A

G

G

V

F

F

M

A

A

A

A

E

G

G

Y

Y

A

A

R

R

A

S

T

S

G

G

K

K

V

P

G

G

C

I

F

C

L

I

V

A

T
|
T

S

S

G

G

P

P

G

G

A

A

T

T

N

N

T

L

V

V

T

S

P

G

I

L

R

A

D

D

C

A

M

L

A

L

D

D

S

S

V

V

P

P

V

L

V

V

A

A

I

I

T

T

G

G

Q

Q

V

V

P

P

T

R

H

R

A

M

M

I

G

G

T

T

D

D

A

A

F
|
F

Q
|
Q

E
|
E

A

T

P

P

I

I

V

V

N

E

I

V

M

T

G

R

S

S

C

I

A

T

K

K

H

H

V

N

F

Y

L

L

V

V

T

M

D

D

P

V

E

E

Q

D

L

I

E

P

A

R

T

I

V

I

R

E

T

E

A

A

F

F

E

F

V

L

A

A

R

T

S

S

G

G

R
|
R

P

P

G

G

P

P

V

V

V

L

V

V

D

D

V

V

P

P

K
|
K

N

D

M

I

Q

Q

N

Q

W

Q

I

L

G

A

E

I

F

P

R

N

G

W

E

E

G

Q

V

A

L

M

E

R

V

L

R

P

G

G

Y

Y

R

M

Q

S

R

R

M

M

E

P

S

K

L

-

R

-

S

-

A

-

K

P

L

P

S

E

D

D

R

S

K

H

C

L

R

E

A

Q

F

I

M

V

E

R

M

L

L

I

E

S

R

E

S

S

R

K

P

P

L

V

L

L

Y

Y

V

V

G
|
G

V

C

V

L

S

N

G

-

E

-

A

S

H

S

Q

D

E

E

L

L

R

G

D

R

F

F

A

V

H

E

T

L

F

T

G

G

I

I

P

P

V

V

V

A

S

T

T
|
T

L
|
L

M
|
M

G

G

L

L

G

G

A

S

V

Y

D

P

T

C

T

D

D

D

D

E

L

L

Y

S

L

L

G

H

M

M

L
|
L

G
|
G

M
|
M

H
|
H

G

G

T

T

A

V

Y

Y

A

A

N

N

Y

Y

A

A

V

V

E

E

D

H

C

S

D

D

F

L

L

L

I

L

A

A

V

F

G
|
G

A

V

R
|
R

F

F

D
|
D

R
|
R

V
|
V

A

T

G

G

K

K

V

L

E

E

E

A

F

F

A

A

P

S

L

R

A

A

E

-

Q

K

I

I

A

V

H

H

I

I

D
|
D

I
|
I

D

D

A

S

A

A

E

E

I

I

G

G

K

K

V

N

K

K

G

T

V

P

D

H

W

V

A

S

H

V

V

C

G
|
G

E
x
D

A
x
V

G

K

R

L

S

A

L

L

R

Q

Q

G

L

M

L

N

R

K

Y

V

G

L

E

E

S

N

M

R

G

A

F

E

E

E

P

L

R

K

F

L

D

D

-

F

-

G

A

V

W

W

L

R

E

N

H

E

V

L

R

N

G

V

L

Q

R

K

E

Q

R

K

H

F

P

P

M

L

D

S

Y

F

D

K

R

T

D

F

S

G

A

E

L

A

I

I

Q

P

P

P

H

Q

Y

Y

V

A

L

I

E

K

K

V

L

L

N

D

E

E

L

L

T

T

A

D

G

G

E

K

A

A

I

I

A

S

T

T

G

G

V
|
V

G
|
G

Q
|
Q

H
|
H

Q

Q

M
|
M

W

W

A

A

Q

Q

Y

F

C

Y

D

N

F

Y

R

K

G

K

P

P

R

R

Q

Q

W

W

L

L

T

S

S

S

G
|
G

G

G

L

L

G
|
G

T

A

M
|
M

G

G

F

F

G

G

L

L

P

P

A

A

I

I

G

G

A

A

Y

S

L

V

G

A

R

N

P

P

D

D

R

A

V

I

V

V

I

V

D

D

V

I

D

D

G
|
G

D
|
D

G
|
G

S
|
S

L

F

R

I

M

M

N

N

L

V

G

Q

E

E

L

L

E

A

T

T

A

I

T

R

T

V

Y

E

N

N

L

L

P

P

V

V

K

K

I

V

L

L

S

L

L

L

N

N

N
|
N

V

Q

G
x
H

D
x
L

G
|
G

M
|
M

V
|
V

R

M

Q

Q

W
|
W

Q

E

-

D

K

R

L

F

Y

Y

F

K

G

A

D

N

R

R

-

A

-

H

-

T

F

F

S

L

G

G

S

D

D

P

K

A

S

Q

L

E

H

D

R

E

-

I

-

F

K

P

D

N

F

M

I

L

K

L

A

F

A

A

E

A

A

A

D

C

G

G

Y

I

E

P

F

-

A

A

R

A

R

R

V

V

A

T

D

K

K

K

E

A

E

D

L

L

E

R

E

E

A

A

L

I

R

Q

A

T

F

M

V

L

E

D

F

T

P

P

G

G

P

P

A

Y

F

L

L

L

E

D

V

V

M

I

I

C

D

P

P
x
H

D

Q

A

E

G

H

V

V

F

L

P

P

M

M

V

I

G

P

P
x
S

G

G

S

G

S

T

Y

F

K

N

E

D

M

V

V

I

T

T

active site: Y32 (= Y45), G34 (= G47), G35 (= G48), A36 (= A49), S37 (≠ I50), E58 (= E84), T81 (= T107), F120 (= F146), Q121 (= Q147), E122 (= E148), K170 (= K196), M265 (= M297), V292 (= V324), V399 (= V430), G425 (= G456), M427 (= M458), D452 (= D483), N479 (= N510), H481 (≠ G512), L482 (≠ D513), M484 (= M515), V485 (= V516), W488 (= W519), H557 (≠ P583)
binding methyl 2-{[(4-methylpyrimidin-2-yl)carbamoyl]sulfamoyl}benzoate: D290 (= D322), R291 (= R323), W488 (= W519), S567 (≠ P593)
binding flavin-adenine dinucleotide-n5-isobutyl ketone: R160 (= R186), G221 (= G251), G222 (= G252), G223 (= G253), T245 (= T277), L246 (= L278), M247 (= M279), L263 (= L295), G264 (= G296), M265 (= M297), H266 (= H298), G285 (= G317), R287 (= R319), D289 (= D321), R291 (= R323), D309 (= D342), I310 (= I343), G327 (= G360), D328 (≠ E361), V329 (≠ A362), M404 (= M435), G422 (= G453)
binding magnesium ion: D452 (= D483), N479 (= N510), H481 (≠ G512)
binding 2-[(2e)-3-[(4-amino-2-methylpyrimidin-5-yl)methyl]-2-(1-hydroxyethylidene)-4-methyl-2,3-dihydro-1,3-thiazol-5-yl]ethyltrihydrogen diphosphate: V399 (= V430), G400 (= G431), Q401 (= Q432), H402 (= H433), M427 (= M458), G451 (= G482), D452 (= D483), G453 (= G484), S454 (= S485), N479 (= N510), H481 (≠ G512), L482 (≠ D513), G483 (= G514), M484 (= M515), V485 (= V516)

3e9yA Arabidopsis thaliana acetohydroxyacid synthase in complex with monosulfuron (see paper)
44% identity, 92% coverage: 26:602/628 of query aligns to 13:576/582 of 3e9yA

query
sites
3e9yA

G

G

G

A

E

D

I

I

I

L

V

V

E

E

V

A

L

L

A

E

Q

R

E

Q

G

G

V

V

D

E

T

T

L

V

F

F

G

A

Y
|
Y

S

P

G
|
G

A
|
A

I
x
S

L

M

P

E

T

I

Y

H

D

-

A

-

I

-

F

-

K

-

Y

-

N

-

E

-

R

-

H

-

R

-

K

-

E

-

Q

Q

A

A

V

L

E

T

E

R

E

S

D

S

P

S

I

I

R

R

L

N

I

V

V

L

P

P

A

R

N

H

E
|
E

Q

Q

G

G

A

G

G

V

F

F

M

A

A

A

A

E

G

G

Y

Y

A

A

R

R

A

S

T

S

G

G

K

K

V

P

G

G

C

I

F

C

L

I

V

A

T
|
T

S

S

G

G

P

P

G

G

A

A

T

T

N

N

T

L

V

V

T

S

P

G

I

L

R

A

D

D

C

A

M

L

A

L

D

D

S

S

V

V

P

P

V

L

V

V

A

A

I

I

T

T

G

G

Q

Q

V

V

P

P

T

R

H

R

A

M

M

I

G

G

T

T

D

D

A

A

F
|
F

Q
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Q

E
|
E

A

T

P

P

I

I

V

V

N

E

I

V

M

T

G

R

S

S

C

I

A

T

K

K

H

H

V

N

F

Y

L

L

V

V

T

M

D

D

P

V

E

E

Q

D

L

I

E

P

A

R

T

I

V

I

R

E

T

E

A

A

F

F

E

F

V

L

A

A

R

T

S

S

G

G

R
|
R

P

P

G

G

P

P

V

V

V

L

V

V

D

D

V

V

P

P

K
|
K

N

D

M

I

Q

Q

N

Q

W

Q

I

L

G

A

E

I

F

P

R

N

G

W

E

E

G

Q

V

A

L

M

E

R

V

L

R

P

G

G

Y

Y

R

M

Q

S

R

R

M

M

E

P

S

K

L

-

R

-

S

-

A

-

K

P

L

P

S

E

D

D

R

S

K

H

C

L

R

E

A

Q

F

I

M

V

E

R

M

L

L

I

E

S

R

E

S

S

R

K

P

P

L

V

L

L

Y

Y

V

V

G
|
G

V

C

V

L

S

N

G

-

E

-

A

S

H

S

Q

D

E

E

L

L

R

G

D

R

F

F

A

V

H

E

T

L

F

T

G

G

I

I

P

P

V

V

V

A

S

T

T
|
T

L
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L

M
|
M

G

G

L

L

G

G

A

S

V

Y

D

P

T

C

T

D

D

D

D

E

L

L

Y

S

L

L

G

H

M

M

L
|
L

G

G

M
|
M

H

H

G

G

T

T

A

V

Y

Y

A

A

N

N

Y

Y

A

A

V

V

E

E

D

H

C

S

D

D

F

L

L

L

I

L

A

A

V

F

G
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G

A

V

R
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R

F

F

D
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D

R
|
R

V
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V

A

T

G

G

K

K

V

L

E

E

E

A

F

F

A

A

P

S

L

R

A

A

E

-

Q

K

I

I

A

V

H

H

I

I

D
|
D

I
|
I

D

D

A

S

A

A

E

E

I

I

G

G

K

K

V

N

K

K

G

T

V

P

D

H

W

V

A

S

H

V

V

C

G
|
G

E
x
D

A
x
V

G

K

R

L

S

A

L

L

R

Q

Q

G

L

M

L

N

R

K

Y

V

G

L

E

E

S

N

M

R

G

A

F

E

E

E

P

L

R

K

F

L

D

D

-

F

-

G

A

V

W

W

L

R

E

N

H

E

V

L

R

N

G

V

L

Q

R

K

E

Q

R

K

H

F

P

P

M

L

D

S

Y

F

D

K

R

T

D

F

S

G

A

E

L

A

I

I

Q

P

P

P

H

Q

Y

Y

V

A

L

I

E

K

K

V

L

L

N

D

E

E

L

L

T

T

A

D

G

G

E

K

A

A

I

I

A

S

T

T

G

G

V
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V

G
|
G

Q
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Q

H
|
H

Q

Q

M
|
M

W

W

A

A

Q

Q

Y

F

C

Y

D

N

F

Y

R

K

G

K

P

P

R

R

Q

Q

W

W

L

L

T

S

S

S

G
|
G

G

G

L

L

G
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G

T

A

M
|
M

G

G

F

F

G

G

L

L

P

P

A

A

I

I

G

G

A

A

Y

S

L

V

G

A

R

N

P

P

D

D

R

A

V

I

V

V

I

V

D

D

V

I

D

D

G
|
G

D
|
D

G
|
G

S
|
S

L

F

R

I

M

M

N

N

L

V

G

Q

E

E

L

L

E

A

T

T

A

I

T

R

T

V

Y

E

N

N

L

L

P

P

V

V

K

K

I

V

L

L

S

L

L

L

N

N

N
|
N

V

Q

G
x
H

D
x
L

G
|
G

M
|
M

V
|
V

R

M

Q

Q

W
|
W

Q

E

-

D

K

R

L

F

Y

Y

F

K

G

A

D

N

R

R

-

A

-

H

-

T

F

F

S

L

G

G

S

D

D

P

K

A

S

Q

L

E

H

D

R

E

-

I

-

F

K

P

D

N

F

M

I

L

K

L

A

F

A

A

E

A

A

A

D

C

G

G

Y

I

E

P

F

-

A

A

R

A

R

R

V

V

A

T

D

K

K

K

E

A

E

D

L

L

E

R

E

E

A

A

L

I

R

Q

A

T

F

M

V

L

E

D

F

T

P

P

G

G

P

P

A

Y

F

L

L

L

E

D

V

V

M

I

I

C

D

P

P
x
H

D

Q

A

E

G

H

V

V

F

L

P

P

M

M

V

I

G

P

P
x
S

G

G

S

G

S

T

Y

F

K

N

E

D

M

V

V

I

T

T

active site: Y32 (= Y45), G34 (= G47), G35 (= G48), A36 (= A49), S37 (≠ I50), E58 (= E84), T81 (= T107), F120 (= F146), Q121 (= Q147), E122 (= E148), K170 (= K196), M265 (= M297), V292 (= V324), V399 (= V430), G425 (= G456), M427 (= M458), D452 (= D483), N479 (= N510), H481 (≠ G512), L482 (≠ D513), M484 (= M515), V485 (= V516), W488 (= W519), H557 (≠ P583)
binding N-[(4-methylpyrimidin-2-yl)carbamoyl]-2-nitrobenzenesulfonamide: D290 (= D322), R291 (= R323), W488 (= W519), S567 (≠ P593)
binding flavin-adenine dinucleotide-n5-isobutyl ketone: R160 (= R186), G221 (= G251), G222 (= G252), G223 (= G253), T245 (= T277), L246 (= L278), M247 (= M279), L263 (= L295), G285 (= G317), R287 (= R319), D289 (= D321), R291 (= R323), D309 (= D342), I310 (= I343), G327 (= G360), D328 (≠ E361), V329 (≠ A362), M404 (= M435), G422 (= G453)
binding magnesium ion: D452 (= D483), N479 (= N510), H481 (≠ G512)
binding 2-[(2e)-3-[(4-amino-2-methylpyrimidin-5-yl)methyl]-2-(1-hydroxyethylidene)-4-methyl-2,3-dihydro-1,3-thiazol-5-yl]ethyltrihydrogen diphosphate: V399 (= V430), G400 (= G431), Q401 (= Q432), H402 (= H433), M427 (= M458), G451 (= G482), G453 (= G484), S454 (= S485), N479 (= N510), H481 (≠ G512), L482 (≠ D513), G483 (= G514), M484 (= M515), V485 (= V516)

7tzzA Crystal structure of arabidopsis thaliana acetohydroxyacid synthase p197t mutant in complex with bispyribac-sodium (see paper)
44% identity, 92% coverage: 26:602/628 of query aligns to 14:577/582 of 7tzzA

query
sites
7tzzA

G

G

G

A

E

D

I

I

I

L

V

V

E

E

V

A

L

L

A

E

Q

R

E

Q

G

G

V

V

D

E

T

T

L

V

F

F

G

A

Y

Y

S

P

G

G

A
|
A

I

S

L

M

P

E

T

I

Y

H

D

-

A

-

I

-

F

-

K

-

Y

-

N

-

E

-

R

-

H

-

R

-

K

-

E

-

Q

Q

A

A

V

L

E

T

E

R

E

S

D

S

P

S

I

I

R

R

L

N

I

V

V

L

P

P

A

R

N

H

E

E

Q

Q

G

G

A

G

G

V

F

F

M

A

A

A

A

E

G

G

Y

Y

A

A

R

R

A

S

T

S

G

G

K

K

V

P

G

G

C

I

F

C

L

I

V

A

T
|
T

S
|
S

G

G

P

P

G

G

A

A

T

T

N

N

T

L

V

V

T

S

P

G

I

L

R

A

D

D

C

A

M

L

A

L

D

D

S

S

V

V

P

P

V

L

V

V

A

A

I

I

T

T

G

G

Q

Q

V

V

P

T

T

R

H

R

A

M

M

I

G

G

T

T

D

D

A

A

F

F

Q
|
Q

E

E

A

T

P

P

I

I

V

V

N

E

I

V

M

T

G

R

S

S

C

I

A

T

K

K

H

H

V

N

F

Y

L

L

V

V

T

M

D

D

P

V

E

E

Q

D

L

I

E

P

A

R

T

I

V

I

R

E

T

E

A

A

F

F

E

F

V

L

A

A

R

T

S

S

G

G

R
|
R

P

P

G

G

P

P

V

V

V

L

V

V

D

D

V

V

P

P

K

K

N

D

M

I

Q

Q

N

Q

W

Q

I

L

G

A

E

I

F

P

R

N

G

W

E

E

G

Q

V

A

L

M

E

R

V

L

R

P

G

G

Y

Y

R

M

Q

S

R

R

M

M

E

P

S

K

L

-

R

-

S

-

A

-

K

P

L

P

S

E

D

D

R

S

K

H

C

L

R

E

A

Q

F

I

M

V

E

R

M

L

L

I

E

S

R

E

S

S

R

K

P

P

L

V

L

L

Y

Y

V

V

G
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G

V

C

V

L

S

N

G

-

E

-

A

S

H

S

Q

D

E

E

L

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D

R

F

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A

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T

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F

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G

I

I

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T

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L

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M

G

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L

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P

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C

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D

D

D

E

L

L

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L

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M
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M

L
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L

G

G

M
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M

H
|
H

G

G

T

T

A

V

Y

Y

A

A

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N

Y

Y

A

A

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V

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E

D

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C

S

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D

F

L

L

L

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A

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G

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R

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R

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V

A

T

G

G

K

K

V

L

E

E

E

A

F

F

A

A

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S

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R

A

A

E

-

Q

K

I

I

A

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H

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I

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D
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D

I
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I

D

D

A

S

A

A

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E

I

I

G

G

K

K

V

N

K

K

G

T

V

P

D

H

W

V

A

S

H

V

V

C

G

G

E
x
D

A
x
V

G

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R

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A

L

L

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Q

G

L

M

L

N

R

K

Y

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G

L

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N

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F

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P

L

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K

F

L

D

D

-

F

-

G

A

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W

W

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N

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L

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L

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I

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P

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H

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Y
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Y

V

A

L

I

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K

K

V

L

L

N

D

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E

L

L

T

T

A

D

G

G

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K

A

A

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M

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W

A

A

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Q

Y

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W

W

L

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T

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S

S

G
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G

G

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L

L

G
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G

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M
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M

G

G

F

F

G

G

L

L

P

P

A

A

I

I

G

G

A

A

Y

S

L

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G

A

R

N

P

P

D

D

R

A

V

I

V

V

I

V

D

D

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I

D

D

G
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G

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S
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S

L

F

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I

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M

N

N

L

V

G
x
Q

E

E

L

L

E

A

T

T

A

I

T

R

T

V

Y

E

N

N

L

L

P

P

V

V

K

K

I

V

L

L

S

L

L

L

N

N

N
|
N

V

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G
x
H

D
x
L

G
|
G

M
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M

V
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V

R

M

Q

Q

W
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W

Q

E

-

D

K

R

L

F

Y

Y

F

K

G

A

D

N

R

R

-

A

-

H

-

T

F

F

S

L

G

G

S

D

D

P

K

A

S

Q

L

E

H

D

R

E

-

I

-

F

K

P

D

N

F

M

I

L

K

L

A

F

A

A

E

A

A

A

D

C

G

G

Y

I

E

P

F

-

A

A

R

A

R

R

V

V

A

T

D

K

K
|
K

E

A

E

D

L

L

E

R

E

E

A

A

L

I

R

Q

A

T

F

M

V

L

E

D

F

T

P

P

G

G

P

P

A

Y

F

L

L

L

E

D

V

V

M

I

I

C

D

P

P

H

D

Q

A

E

G

H

V

V

F

L

P

P

M

M

V

I

G

P

P
x
S

G

G

S

G

S

T

Y

F

K

N

E

D

M

V

V

I

T

T

binding 2,6-bis[(4,6-dimethoxypyrimidin-2-yl)oxy]benzoic acid: M266 (= M297), R292 (= R323), W489 (= W519), S568 (≠ P593)
binding 2-[3-[(4-azanyl-2-methyl-pyrimidin-5-yl)methyl]-2-[(1~{S})-1-(dioxidanyl)-1-oxidanyl-ethyl]-4-methyl-1,3-thiazol-5-yl]ethyl phosphono hydrogen phosphate: V400 (= V430), G401 (= G431), Q402 (= Q432), H403 (= H433), G426 (= G456), M428 (= M458), G452 (= G482), D453 (= D483), G454 (= G484), S455 (= S485), L483 (≠ D513), G484 (= G514), M485 (= M515), V486 (= V516)
binding flavin-adenine dinucleotide: R161 (= R186), G222 (= G251), G223 (= G252), G224 (= G253), T246 (= T277), L247 (= L278), M248 (= M279), M263 (= M294), L264 (= L295), M266 (= M297), H267 (= H298), G286 (= G317), R288 (= R319), V293 (= V324), D310 (= D342), I311 (= I343), D329 (≠ E361), V330 (≠ A362), M405 (= M435), G423 (= G453)
binding magnesium ion: A37 (= A49), T82 (= T107), S83 (= S108), Q122 (= Q147), Y381 (= Y411), D453 (= D483), M458 (= M488), Q461 (≠ G491), N480 (= N510), H482 (≠ G512), K533 (= K558)

7egvA Acetolactate synthase from trichoderma harzianum with inhibitor harzianic acid (see paper)
43% identity, 95% coverage: 25:618/628 of query aligns to 8:583/590 of 7egvA

query
sites
7egvA

S

S

G

G

E

E

I

I

I

F

V

H

E

E

V

M

L

M

A

L

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R

E

Q

G

G

V

V

D

K

T

H

L

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F

F

G

G

Y
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Y

S
x
P

G
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G

A
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A

I
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I

L

L

P

P

T

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Y

F

D

D

A

A

I

I

F

-

K

-

Y

Y

N

N

E

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K

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H

R

-

K

-

E

-

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-

A

-

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-

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I

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E
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E

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Q

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A

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H

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M

A

A

A

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G

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Y

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A

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A

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G

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K

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P

G

G

C

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L

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V

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T

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S

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G

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P

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G

A

A

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T

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N

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I

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C

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M

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A

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M

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Q

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A

A

A

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Q

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A

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I

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C

C

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R

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K

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-

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-

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A

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I

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-

R

-

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Y

-

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-

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-

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-

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A

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I

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A

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A

A

K

K

E

L

L

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K

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G

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x
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G
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G

V

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E

A

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H

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E
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E

-

L

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A

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x
H

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M

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V

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I

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-

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W

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M

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-

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A

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-

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M

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M

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L

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E

E

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Y

F

N

N

L

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G

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K

I

V

L

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S

V

L

L

N

N

N
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x
E

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x
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G

M
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M

V
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V

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W

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K

N

L

L

Y
x
F

F
x
Y

G

E

D

D

R

R

F

Y

S

S

G

H

S

T

D

H

K

Q

S

-

L

-

H

R

R

N

K

P

D

D

F

F

I

M

K

K

A
x
L

A

A

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D

A

A

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M

G
|
G

Y
x
I

E

Q

F

H

A

-

R

Q

R

R

V

V

A

A

D

E

K

P

E

D

E

K

L

L

E

V

E

D

A

A

L

L

R

K

A

W

F

L

V

I

E

N

F

T

P

D

G

G

P

P

A

A

F

L

L

L

E

E

V

V

M

V

I

T

D

D

P

K

D

K

A

V

G

P

V

V

F

L

P

P

M

M

V

V

G

P

P

A

G

G

S

S

S

A

Y

L

K

H

E

E

M

F

V

L

T

V

G

F

D

D

H

-

I

-

P

P

S

E

R

K

D

D

M

K

A

Q

L

R

R

R

P

E

R

L

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M

K

K

active site: Y28 (= Y45), G30 (= G47), G31 (= G48), A32 (= A49), I33 (= I50), E54 (= E84), T77 (= T107), F116 (= F146), Q117 (= Q147), K166 (= K196), E220 (= E262), M256 (= M297), V283 (= V324), V400 (= V430), L425 (= L455), G426 (= G456), M428 (= M458), Q483 (≠ D513), M485 (= M515), V486 (= V516), W489 (= W519), L511 (≠ A543), G516 (= G548), I517 (≠ Y549)
binding flavin-adenine dinucleotide: R156 (= R186), G209 (= G251), Q210 (≠ G252), G211 (= G253), T236 (= T277), L237 (= L278), H238 (≠ M279), G276 (= G317), S277 (≠ A318), R278 (= R319), D280 (= D321), R282 (= R323), V283 (= V324), E309 (≠ D342), I310 (= I343), D328 (≠ E361), V329 (≠ A362), M405 (= M435), G423 (= G453), G424 (= G454)
binding (2S)-3-methyl-2-[[(2S,4R)-1-methyl-4-[(2E,4E)-octa-2,4-dienoyl]-3,5-bis(oxidanylidene)pyrrolidin-2-yl]methyl]-2-oxidanyl-butanoic acid: F493 (≠ Y523), Y494 (≠ F524)
binding magnesium ion: D453 (= D483), N480 (= N510), E482 (≠ G512)
binding 2-{3-[(4-amino-2-methylpyrimidin-5-yl)methyl]-4-methyl-2-oxo-2,3-dihydro-1,3-thiazol-5-yl}ethyl trihydrogendiphosphate: P29 (≠ S46), E54 (= E84), Q117 (= Q147), V400 (= V430), G401 (= G431), Q402 (= Q432), H403 (= H433), G426 (= G456), M428 (= M458), D453 (= D483), A454 (≠ G484), S455 (= S485), E482 (≠ G512), Q483 (≠ D513), G484 (= G514), M485 (= M515), V486 (= V516)

1t9cA Crystal structure of yeast acetohydroxyacid synthase in complex with a sulfonylurea herbicide, sulfometuron methyl (see paper)
43% identity, 93% coverage: 24:604/628 of query aligns to 8:577/596 of 1t9cA

query
sites
1t9cA

M

L

S

T

G

G

E

Q

I

I

I

F

V

N

E

E

V

M

L

M

A

S

Q

R

E

Q

G

N

V

V

D

D

T

T

L

V

F

F

G

G

Y
|
Y

S

P

G
|
G

A
|
A

I
|
I

L

L

P

P

T

V

Y

Y

D

D

A

A

I

I

F

-

K

-

Y

-

N

-

E

-

R

-

H

-

R

-

K

-

E

-

Q

-

A

-

V

-

E

H

E

N

E

S

D

D

P

K

I

F

R

N

L

F

I

V

V

L

P

P

A

K

N

H

E
|
E

Q

Q

G

G

A

A

G

G

F

H

M

M

A

A

A

E

G

G

Y

Y

A

A

R

R

A

A

T

S

G

G

K

K

V

P

G

G

C

V

F

V

L

L

V

V

T
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T

S

S

G

G

P

P

G

G

A

A

T

T

N

N

T

V

V

V

T

T

P

P

I

M

R

A

D

D

C

A

M

F

A

A

D

D

S

G

V

I

P

P

V

M

V

V

A

V

I

F

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T

G

G

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A

A

M

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D

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F

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E
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E

A

A

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I

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V

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C

C

A

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K

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A

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N

T

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A

A

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F

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E

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A

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S

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G

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R

P

P

G

G

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P

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L

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D

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K

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M

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A

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A

S

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A

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D

-

E

-

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R

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C

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A

K

F

A

M

A

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M

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D

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L
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L

G

G

M
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M

H
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H

G

G

T

C

A

A

Y

T

A

A

N

N

Y

L

A

A

V

V

E

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D

N

C

A

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F

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L

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A
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A

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V

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S

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F

A

A

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P

L

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A

A

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Q

R

-

A

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I

I

A

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H

H

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x
E

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I

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A

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V

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K

K

K

L

L

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K

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W

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W

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M

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G

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G

G

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A

A

I

I

G

G

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I

D

D

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D

G

G

D
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D

G

A

S

S

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N

M

M

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L

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E

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A

A

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T

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G

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V

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K

I

I

L

L

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I

L

L

N

N

N
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N

V

E

G
x
E

D
x
Q

G

G

M
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M

V
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V

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Q

W
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W

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Q

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L

Y

F

F

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H

R

R

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S

T

D

H

K

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S

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L

-

H

-

R

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F

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K

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x
L

A

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E

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G

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L

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-

A

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V

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K

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G

S

S

S

G

Y

L

K

D

E

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M

F

V

I

T

N

G

F

D

D

active site: Y29 (= Y45), G31 (= G47), G32 (= G48), A33 (= A49), I34 (= I50), E55 (= E84), T78 (= T107), F117 (= F146), Q118 (= Q147), E119 (= E148), K167 (= K196), R227 (≠ Q261), M263 (= M297), V290 (= V324), V406 (= V430), L431 (= L455), G432 (= G456), M434 (= M458), D459 (= D483), N486 (= N510), E488 (≠ G512), Q489 (≠ D513), M491 (= M515), V492 (= V516), W495 (= W519), L517 (≠ A543), G522 (= G548), L523 (≠ Y549), K556 (≠ P583)
binding methyl 2-[({[(4,6-dimethylpyrimidin-2-yl)amino]carbonyl}amino)sulfonyl]benzoate: G32 (= G48), V107 (= V136), P108 (= P137), F117 (= F146), K167 (= K196), D288 (= D322), R289 (= R323), W495 (= W519)
binding flavin-adenine dinucleotide: R157 (= R186), G216 (= G251), A217 (≠ G252), G218 (= G253), N221 (≠ S256), T243 (= T277), L244 (= L278), Q245 (≠ M279), L261 (= L295), M263 (= M297), H264 (= H298), G283 (= G317), A284 (= A318), R285 (= R319), D287 (= D321), R289 (= R323), V290 (= V324), E316 (≠ D342), V317 (≠ I343), N321 (≠ E347), G334 (= G360), D335 (≠ E361), A336 (= A362), M411 (= M435), G429 (= G453), G430 (= G454)
binding magnesium ion: D459 (= D483), N486 (= N510), E488 (≠ G512)

Query Sequence

>WP_011814380.1 NCBI__GCF_000015585.1:WP_011814380.1
MDTAIVNPQAETEATSHPLAGKTMSGGEIIVEVLAQEGVDTLFGYSGGAILPTYDAIFKY
NERHRKEQAVEEEDPIRLIVPANEQGAGFMAAGYARATGKVGCFLVTSGPGATNTVTPIR
DCMADSVPVVAITGQVPTHAMGTDAFQEAPIVNIMGSCAKHVFLVTDPEQLEATVRTAFE
VARSGRPGPVVVDVPKNMQNWIGEFRGEGVLEVRGYRQRMESLRSAKLSDRKCRAFMEML
ERSRRPLLYVGGGVVSGEAHQELRDFAHTFGIPVVSTLMGLGAVDTTDDLYLGMLGMHGT
AYANYAVEDCDFLIAVGARFDDRVAGKVEEFAPLAEQIAHIDIDAAEIGKVKGVDWAHVG
EAGRSLRQLLRYGESMGFEPRFDAWLEHVRGLRERHPMDYDRDSALIQPHYVLEKLNELT
AGEAIIATGVGQHQMWAAQYCDFRGPRQWLTSGGLGTMGFGLPAAIGAYLGRPDRVVIDV
DGDGSLRMNLGELETATTYNLPVKILSLNNVGDGMVRQWQKLYFGDRFSGSDKSLHRKDF
IKAAEADGYEFARRVADKEELEEALRAFVEFPGPAFLEVMIDPDAGVFPMVGPGSSYKEM
VTGDHIPSRDMALRPRTKLEDGESPDLF

Or try a new SitesBLAST search

SitesBLAST's Database

SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory