Comparing WP_011840277.1 NCBI__GCF_000015985.1:WP_011840277.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures
Found 1 hits to proteins with known functional sites (download)
6u7lA 2.75 angstrom crystal structure of galactarate dehydratase from escherichia coli. (see paper)
34% identity, 91% coverage: 32:485/500 of query aligns to 33:446/460 of 6u7lA
>WP_011840277.1 NCBI__GCF_000015985.1:WP_011840277.1
MTASRPAFMHLSPADTVGIALRALSAGEEALGVTLAADVPLGHKFAVTAMPAGAAVVKYG
QVMGVATADIAPGDHVHSHNCAMSDSHSDRSDAKGTLHAAPARQTFEGYLRPDGRVGTRN
YIGIMASVNCSSTVCNAIADAANRTLLPRFPGIDGFAPIVHDQGCGMASAGEGFDALVRV
LKGYRDHPNFGGVLIVGLGCEVNQLTLYKRTDWTEERIGIFNIQDVGGSASAVRRALELL
EPICAAANEDRRSAQPVSKLVLGMQCGGSDGFSGITANPALGVASDMLVAAGGTSILSET
PEIYGAEHLLIARADAETGRKIEGMIDWWRDYAAKNGASLDNNPSPGNKRGGLTTILEKS
LGAVAKGGLSPLSGAFAYAEPIRIPGFVYMDSPGYDPVAATGQVASGANLIAFTTGRGSC
FGAKPAPSIKLTSNSDLARRMPEDMDIDCGVVIEEGVSLEEMGRRIYDLLLDTASGKKSK
SEEFGYGDNEFVPWKIGATL
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory