Comparing WP_011841109.1 NCBI__GCF_000015985.1:WP_011841109.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 14 hits to proteins with known functional sites (download)
4f0lB Crystal structure of amidohydrolase from brucella melitensis
50% identity, 99% coverage: 2:451/455 of query aligns to 3:447/449 of 4f0lB
Q9HU77 Formimidoylglutamate deiminase; Formiminoglutamate deiminase; N-formimino-L-glutamate deiminase; N-formimino-L-glutamate iminohydrolase; EC 3.5.3.13 from Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) (see 2 papers)
50% identity, 99% coverage: 1:451/455 of query aligns to 1:451/453 of Q9HU77
3mduA The structure of n-formimino-l-glutamate iminohydrolase from pseudomonas aeruginosa complexed with n-guanidino-l-glutamate (see paper)
50% identity, 98% coverage: 4:451/455 of query aligns to 3:450/450 of 3mduA
4rdvB The structure of n-formimino-l-glutamate iminohydrolase from pseudomonas aeruginosa complexed with n-formimino-l-aspartate
50% identity, 98% coverage: 4:451/455 of query aligns to 3:450/451 of 4rdvB
3lnpA Crystal structure of amidohydrolase family protein olei01672_1_465 from oleispira antarctica (see paper)
25% identity, 91% coverage: 18:433/455 of query aligns to 25:418/441 of 3lnpA
3hpaA Crystal structure of an amidohydrolase gi:44264246 from an evironmental sample of sargasso sea (see paper)
27% identity, 92% coverage: 17:433/455 of query aligns to 22:403/428 of 3hpaA
8is4A Structure of an isocytosine specific deaminase vcz in complexed with 5-fu (see paper)
25% identity, 90% coverage: 23:432/455 of query aligns to 29:426/452 of 8is4A
4dzhA Crystal structure of an adenosine deaminase from xanthomonas campestris (target nysgrc-200456) with bound zn
29% identity, 49% coverage: 206:426/455 of query aligns to 190:409/439 of 4dzhA
Sites not aligning to the query:
4gbdA Crystal structure of adenosine deaminase from pseudomonas aeruginosa pao1 with bound zn and methylthio-coformycin (see paper)
27% identity, 51% coverage: 203:433/455 of query aligns to 184:413/435 of 4gbdA
Sites not aligning to the query:
4dykA Crystal structure of an adenosine deaminase from pseudomonas aeruginosa pao1 (target nysgrc-200449) with bound zn
27% identity, 51% coverage: 203:433/455 of query aligns to 184:413/437 of 4dykA
Sites not aligning to the query:
4f0sA Crystal structure of an adenosine deaminase homolog from chromobacterium violaceum (target nysgrc-019589) with bound inosine.
29% identity, 49% coverage: 202:426/455 of query aligns to 182:405/434 of 4f0sA
Sites not aligning to the query:
4f0rA Crystal structure of an adenosine deaminase homolog from chromobacterium violaceum (target nysgrc-019589) bound zn and 5'- methylthioadenosine (unproductive complex)
29% identity, 49% coverage: 202:426/455 of query aligns to 182:405/436 of 4f0rA
Sites not aligning to the query:
6ohbA E. Coli guanine deaminase (see paper)
24% identity, 49% coverage: 205:428/455 of query aligns to 202:431/435 of 6ohbA
Sites not aligning to the query:
2imrA Crystal structure of amidohydrolase dr_0824 from deinococcus radiodurans
27% identity, 38% coverage: 203:373/455 of query aligns to 170:358/380 of 2imrA
Sites not aligning to the query:
>WP_011841109.1 NCBI__GCF_000015985.1:WP_011841109.1
MQLIHAEEALLPEGWARDVTIRIEGGKIASVLPGTAAGAEAVRVGCLLPAPVNLHSHAFQ
RAMAGLTEGRGPDGQDSFWTWRRLMFRFLESLTPDEVEAIAAFAQIEMLEAGFAAVAEFH
YLHHRPDGRAYADPAEMAARICAASETSGLGLTLLPVLYQQGGCDGRALAPGQVRFGSDP
TSYAGLLDGARRALAGLPADATLGVAPHSLRAVSPEGLEAAVALAGSGPIHMHLAEQAAE
VEEVEAGLGARPVSWLLDHQPVDARWCLIHCTQMQPAETDRLARTSAVAGLCPVTEANLG
DGIFDGARYMAAGGRFGIGSDSNIRIAFSEELRQLDYSQRLRDRVRAPFATAGRSSGRVL
HEAALAGGAQAAGRASGALAPGLWADLLALDRGAVDLEGRSGDGLLDAWIFAGSDRMASE
VWSAGRHVVSGGRHVARSPIEAGYRRVMARLRRLL
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory