Comparing WP_011876078.1 NCBI__GCF_000016205.1:WP_011876078.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures
Found 6 hits to proteins with known functional sites (download)
P54955 N-acetylcysteine deacetylase; S-(2-succino)cysteine metabolism operon protein P; EC 3.5.1.- from Bacillus subtilis (strain 168)
37% identity, 99% coverage: 2:384/387 of query aligns to 3:376/380 of P54955
O04373 IAA-amino acid hydrolase ILR1-like 4; jasmonoyl-L-amino acid hydrolase; EC 3.5.1.-; EC 3.5.1.127 from Arabidopsis thaliana (Mouse-ear cress) (see paper)
36% identity, 96% coverage: 13:384/387 of query aligns to 52:431/440 of O04373
P54968 IAA-amino acid hydrolase ILR1; EC 3.5.1.- from Arabidopsis thaliana (Mouse-ear cress) (see paper)
35% identity, 97% coverage: 7:380/387 of query aligns to 50:423/442 of P54968
4ewtA The crystal structure of a putative aminohydrolase from methicillin resistant staphylococcus aureus (see paper)
34% identity, 96% coverage: 3:374/387 of query aligns to 10:378/389 of 4ewtA
6slfA Nalpha-acylglutamine aminoacylase from corynebacterium sp.Releasing human axilla odorants co-crystallised with high affinity inhibitor (see paper)
36% identity, 85% coverage: 3:330/387 of query aligns to 16:341/398 of 6slfA
Sites not aligning to the query:
3ramA Crystal structure of hmra (see paper)
25% identity, 70% coverage: 14:285/387 of query aligns to 23:274/391 of 3ramA
Sites not aligning to the query:
>WP_011876078.1 NCBI__GCF_000016205.1:WP_011876078.1
MERSLQEQLTSWRHRLHQDPETGFEEVRTSDYIANILKTLGMEVHRGIGGTGLVANLKIG
DGTRAIGLRADMDALNIAERAPGRPYASCTPGKMHACGHDGHMAMILGAARLLAEQRNFN
GTVRFIFQPAEEHGRGAKAMMKDGLFERFPVDAIFGAHNMPGMPAGSFSTRPGGIMASED
NFVIRIKARGTHAARPHMGVDPIVIASQIVLALQTIISRNLDPSLPAVISCTEIITDGLR
NVIPSNVTIKGDTRSYSPDVQQLLETRMREVSEGICRMHGVECEFEYTHEFAPTVNTPQY
VEAAVAAATHVAGAQNVDTNVQPMMISEDFGAFLQVVPGNFIFIGNGVANDKGGMPLHNA
TYDFNDEILLTGARYFAELARLTLPAD
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory