Comparing WP_011913470.1 NCBI__GCF_000013785.1:WP_011913470.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
4zv2A An ancestral arginine-binding protein bound to glutamine (see paper)
46% identity, 84% coverage: 39:259/264 of query aligns to 4:224/225 of 4zv2A
4zv1A An ancestral arginine-binding protein bound to arginine (see paper)
46% identity, 84% coverage: 39:259/264 of query aligns to 4:226/226 of 4zv1A
5t0wA Crystal structure of the ancestral amino acid-binding protein anccdt- 1, a precursor of cyclohexadienyl dehydratase
44% identity, 86% coverage: 32:258/264 of query aligns to 3:228/229 of 5t0wA
3vv5A Crystal structure of ttc0807 complexed with (s)-2-aminoethyl-l- cysteine (aec) (see paper)
42% identity, 89% coverage: 27:262/264 of query aligns to 1:234/237 of 3vv5A
3vvfA Crystal structure of ttc0807 complexed with arginine (see paper)
42% identity, 89% coverage: 27:262/264 of query aligns to 5:238/241 of 3vvfA
3vveA Crystal structure of ttc0807 complexed with lysine (see paper)
42% identity, 89% coverage: 27:262/264 of query aligns to 5:238/241 of 3vveA
3vvdA Crystal structure of ttc0807 complexed with ornithine (see paper)
42% identity, 89% coverage: 27:262/264 of query aligns to 5:238/241 of 3vvdA
2ylnA Crystal structure of the l-cystine solute receptor of neisseria gonorrhoeae in the closed conformation (see paper)
38% identity, 90% coverage: 26:263/264 of query aligns to 1:238/240 of 2ylnA
6svfA Crystal structure of the p235gk mutant of argbp from t. Maritima (see paper)
36% identity, 86% coverage: 32:258/264 of query aligns to 3:227/229 of 6svfA
3k4uE Crystal structure of putative binding component of abc transporter from wolinella succinogenes dsm 1740 complexed with lysine
33% identity, 83% coverage: 39:258/264 of query aligns to 4:226/234 of 3k4uE
8gu1A Crystal structure of putative amino acid binding periplasmic abc transporter protein from candidatus liberibacter asiaticus in complex with pimozide (see paper)
33% identity, 84% coverage: 41:262/264 of query aligns to 3:225/234 of 8gu1A
6aalA Crystal structure of putative amino acid binding periplasmic abc transporter protein from candidatus liberibacter asiaticus in complex with arginine (see paper)
33% identity, 84% coverage: 41:262/264 of query aligns to 3:225/234 of 6aalA
6a80A Crystal structure of putative amino acid binding periplasmic abc transporter protein from candidatus liberibacter asiaticus in complex with cystine (see paper)
33% identity, 84% coverage: 41:262/264 of query aligns to 3:225/234 of 6a80A
8gtuA Crystal structure of putative amino acid binding periplasmic abc transporter protein from candidatus liberibacter asiaticus in complex with clidinium (see paper)
33% identity, 84% coverage: 41:262/264 of query aligns to 5:227/236 of 8gtuA
8eyzA Engineered glutamine binding protein bound to gln and a cobaloxime ligand (see paper)
32% identity, 84% coverage: 41:261/264 of query aligns to 5:224/226 of 8eyzA
5otaA Structure of the periplasmic binding protein (pbp) noct from agrobacterium tumefaciens c58 in complex with octopinic acid (see paper)
31% identity, 85% coverage: 40:263/264 of query aligns to 3:253/254 of 5otaA
5ot9A Structure of the periplasmic binding protein (pbp) noct from a.Tumefaciens c58 in complex with histopine. (see paper)
31% identity, 85% coverage: 40:263/264 of query aligns to 3:253/254 of 5ot9A
4powA Structure of the pbp noct in complex with pyronopaline (see paper)
31% identity, 85% coverage: 40:263/264 of query aligns to 3:253/254 of 4powA
4i62A 1.05 angstrom crystal structure of an amino acid abc transporter substrate-binding protein abpa from streptococcus pneumoniae canada mdr_19a bound to l-arginine
32% identity, 88% coverage: 32:262/264 of query aligns to 1:235/237 of 4i62A
5otcA Structure of the periplasmic binding protein (pbp) noct from agrobacterium tumefaciens c58 in complex with noroctopinic acid. (see paper)
31% identity, 85% coverage: 40:263/264 of query aligns to 3:253/256 of 5otcA
>WP_011913470.1 NCBI__GCF_000013785.1:WP_011913470.1
MTFAILRRHFLLGSLSLLLGSLFMPAFAADLLDEIKSNGTLEVGLEGTYPPFNYQDESGE
LTGFEVDFANALAEELGVKAEFQPTKWDGILAALESKRLDVVINQVTISEERKQKYDFST
PYTVSGIQALTRKADADSIKLPTDLAGKKVGVGLGTNYEQWLKENVPQADIRTYDDDPTK
FQDLAVGRIDVILVDRLAAFEMVEKTGNRLAVAGEAFSRQESGVALRKGNPQLLAAINEA
IAKLRADGTLKELSEKWFGADVTQ
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory