Comparing WP_012042345.1 NCBI__GCF_000015165.1:WP_012042345.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures
Found 20 (the maximum) hits to proteins with known functional sites (download)
P04983 Ribose import ATP-binding protein RbsA; EC 7.5.2.7 from Escherichia coli (strain K12) (see paper)
39% identity, 91% coverage: 13:483/516 of query aligns to 3:470/501 of P04983
8k1pB Mycobacterial efflux pump, adp+vanadate bound state
33% identity, 42% coverage: 15:229/516 of query aligns to 4:208/213 of 8k1pB
8k1oB Mycobacterial efflux pump, amppnp bound state
33% identity, 42% coverage: 15:229/516 of query aligns to 6:210/215 of 8k1oB
3c4jA Abc protein artp in complex with atp-gamma-s
29% identity, 46% coverage: 13:249/516 of query aligns to 2:240/242 of 3c4jA
3c41J Abc protein artp in complex with amp-pnp/mg2+
29% identity, 46% coverage: 13:249/516 of query aligns to 2:240/242 of 3c41J
2olkA Abc protein artp in complex with adp-beta-s
29% identity, 46% coverage: 13:249/516 of query aligns to 2:240/242 of 2olkA
2oljA Abc protein artp in complex with adp/mg2+
29% identity, 46% coverage: 13:249/516 of query aligns to 2:240/242 of 2oljA
4u00A Crystal structure of ttha1159 in complex with adp (see paper)
30% identity, 42% coverage: 14:229/516 of query aligns to 2:215/241 of 4u00A
4yerA Crystal structure of an abc transporter atp-binding protein (tm_1403) from thermotoga maritima msb8 at 2.35 a resolution
29% identity, 46% coverage: 17:251/516 of query aligns to 7:231/285 of 4yerA
P30750 Methionine import ATP-binding protein MetN; EC 7.4.2.11 from Escherichia coli (strain K12) (see 3 papers)
30% identity, 49% coverage: 14:265/516 of query aligns to 1:263/343 of P30750
Sites not aligning to the query:
4ymuJ Crystal structure of an amino acid abc transporter complex with arginines and atps (see paper)
29% identity, 42% coverage: 14:229/516 of query aligns to 1:215/240 of 4ymuJ
3tuzC Inward facing conformations of the metni methionine abc transporter: cy5 semet soak crystal form (see paper)
30% identity, 49% coverage: 14:265/516 of query aligns to 2:264/344 of 3tuzC
Sites not aligning to the query:
3tuiC Inward facing conformations of the metni methionine abc transporter: cy5 native crystal form (see paper)
30% identity, 49% coverage: 14:265/516 of query aligns to 2:264/344 of 3tuiC
6cvlD Crystal structure of the escherichia coli atpgs-bound metni methionine abc transporter in complex with its metq binding protein (see paper)
30% identity, 49% coverage: 14:265/516 of query aligns to 2:264/344 of 6cvlD
P69874 Spermidine/putrescine import ATP-binding protein PotA; EC 7.6.2.11 from Escherichia coli (strain K12) (see 3 papers)
30% identity, 45% coverage: 8:239/516 of query aligns to 11:240/378 of P69874
Sites not aligning to the query:
5ws4A Crystal structure of tripartite-type abc transporter macb from acinetobacter baumannii (see paper)
30% identity, 43% coverage: 11:232/516 of query aligns to 1:225/650 of 5ws4A
1g6hA Crystal structure of the adp conformation of mj1267, an atp-binding cassette of an abc transporter (see paper)
27% identity, 42% coverage: 14:229/516 of query aligns to 4:229/254 of 1g6hA
1g9xB Characterization of the twinning structure of mj1267, an atp-binding cassette of an abc transporter (see paper)
27% identity, 42% coverage: 14:229/516 of query aligns to 4:229/253 of 1g9xB