Comparing WP_012048861.1 NCBI__GCF_000016765.1:WP_012048861.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 16 hits to proteins with known functional sites (download)
4n6bA Soybean serine acetyltransferase complexed with coa (see paper)
34% identity, 61% coverage: 51:158/176 of query aligns to 120:220/233 of 4n6bA
Sites not aligning to the query:
4n69A Soybean serine acetyltransferase complexed with serine (see paper)
33% identity, 61% coverage: 51:158/176 of query aligns to 127:230/243 of 4n69A
8i04A Crystal structure of serine acetyltransferase from salmonella typhimurium complexed with serine (see paper)
34% identity, 68% coverage: 40:158/176 of query aligns to 92:227/258 of 8i04A
Sites not aligning to the query:
8i09A Crystal structure of serine acetyltransferase from salmonella typhimurium complexed with butyl gallate (see paper)
34% identity, 68% coverage: 40:158/176 of query aligns to 95:230/246 of 8i09A
Sites not aligning to the query:
8i06A Crystal structure of serine acetyltransferase from salmonella typhimurium complexed with coa (see paper)
34% identity, 68% coverage: 40:158/176 of query aligns to 96:231/244 of 8i06A
Sites not aligning to the query:
1t3dA Crystal structure of serine acetyltransferase from e.Coli at 2.2a (see paper)
33% identity, 68% coverage: 40:158/176 of query aligns to 96:231/262 of 1t3dA
Sites not aligning to the query:
3gvdI Crystal structure of serine acetyltransferase cyse from yersinia pestis
30% identity, 90% coverage: 1:159/176 of query aligns to 61:235/272 of 3gvdI
4h7oA Crystal structure of serine acetyltransferase from vibrio cholerae o1 biovar el tor n16961
37% identity, 56% coverage: 60:158/176 of query aligns to 132:227/258 of 4h7oA
Sites not aligning to the query:
1ssqD Serine acetyltransferase- complex with cysteine (see paper)
35% identity, 59% coverage: 60:163/176 of query aligns to 132:232/257 of 1ssqD
Sites not aligning to the query:
7ra4A Crystal structure of neisseria gonorrhoeae serine acetyltransferase (cyse) in complex with serine (see paper)
33% identity, 61% coverage: 51:158/176 of query aligns to 127:230/243 of 7ra4A
Sites not aligning to the query:
1sstA Serine acetyltransferase- complex with coa (see paper)
32% identity, 59% coverage: 60:163/176 of query aligns to 132:225/233 of 1sstA
Sites not aligning to the query:
6wyeA Crystal structure of neisseria gonorrhoeae serine acetyltransferase (cyse) (see paper)
33% identity, 61% coverage: 51:158/176 of query aligns to 129:232/261 of 6wyeA
Sites not aligning to the query:
7bw9A Crystal structure of serine acetyltransferase isoform 3 in complex with cysteine from entamoeba histolytica
31% identity, 53% coverage: 65:157/176 of query aligns to 163:252/280 of 7bw9A
Sites not aligning to the query:
4hzdA Crystal structure of serine acetyltransferase in complex with coenzyme a from brucella abortus strain s19 (see paper)
36% identity, 59% coverage: 55:158/176 of query aligns to 132:231/250 of 4hzdA
Sites not aligning to the query:
3q1xA Crystal structure of entamoeba histolytica serine acetyltransferase 1 in complex with l-serine (see paper)
33% identity, 45% coverage: 82:160/176 of query aligns to 180:263/267 of 3q1xA
3p47A Crystal structure of entamoeba histolytica serine acetyltransferase 1 in complex with l-cysteine (see paper)
33% identity, 45% coverage: 82:160/176 of query aligns to 182:265/270 of 3p47A
>WP_012048861.1 NCBI__GCF_000016765.1:WP_012048861.1
MPNIFRILKEDWRSNRGAGLVSQLFLINYRLGRIALQKKEKYGTPILLGYLPLLLNARFL
SLFLGCSIPFSTKLGRRIRFQHGLQGIFISGLASVGDDCLILHQVTIGSNIGSRSGRPAA
PRIGNRIFIGVGAKIIGDLDVGDDAMIGAQALVIRSVPSGARCHAPSAEIRMGLEA
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory