Comparing WP_012116019.1 NCBI__GCF_000017645.1:WP_012116019.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 2 hits to proteins with known functional sites (download)
8wm8B Cryo-em structure of cyanobacterial nitrate/nitrite transporter nrtbcd in complex with nitrate (see paper)
33% identity, 87% coverage: 20:257/273 of query aligns to 24:254/265 of 8wm8B
A0A0H2ZQB9 Ergothioneine transporter EgtUBC from Streptococcus pneumoniae serotype 2 (strain D39 / NCTC 7466) (see paper)
29% identity, 55% coverage: 118:266/273 of query aligns to 60:207/506 of A0A0H2ZQB9
Sites not aligning to the query:
>WP_012116019.1 NCBI__GCF_000017645.1:WP_012116019.1
MHTSRLKSVAEGLAVPVAALVLWQLACSLGLVNPMVLPSPAAVAVRWWAYLAPMEAYDPA
AGSYLAWLFSGEMIHDAIGSLTRVALGFFVGAGLALPLGLFMGSSDTIYRHINPLMQVLR
PIPPIAYIPLSILWFGLGNAPAVFLIAIGAFFPVLMNTIAGVRHVDGIYIRAARSLGASR
LTIFRRVILPAATPYILSGARIGIGTAFIVVIVAEMIAVNNGLGFRILEAREYFWSDKII
AGMFTIGLLGLAIDMAVSRLNNHLLRWHRGLES
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory