Comparing WP_012116350.1 NCBI__GCF_000017645.1:WP_012116350.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
6neeB Crystal structure of a reconstructed ancestor of triosephosphate isomerase from eukaryotes (see paper)
48% identity, 98% coverage: 3:250/254 of query aligns to 2:250/252 of 6neeB
P36204 Bifunctional PGK/TIM; EC 2.7.2.3; EC 5.3.1.1 from Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8) (see paper)
46% identity, 97% coverage: 4:249/254 of query aligns to 401:647/654 of P36204
Sites not aligning to the query:
1btmA Triosephosphate isomerase (tim) complexed with 2-phosphoglycolic acid (see paper)
47% identity, 97% coverage: 5:250/254 of query aligns to 1:248/251 of 1btmA
P00943 Triosephosphate isomerase; TIM; TPI; Triose-phosphate isomerase; EC 5.3.1.1 from Geobacillus stearothermophilus (Bacillus stearothermophilus) (see 2 papers)
47% identity, 97% coverage: 5:250/254 of query aligns to 2:249/253 of P00943
P27876 Triosephosphate isomerase; TIM; TPI; Triose-phosphate isomerase; EC 5.3.1.1 from Bacillus subtilis (strain 168) (see paper)
45% identity, 96% coverage: 5:247/254 of query aligns to 2:246/253 of P27876
P00942 Triosephosphate isomerase; TIM; Triose-phosphate isomerase; EC 5.3.1.1 from Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) (see 2 papers)
45% identity, 93% coverage: 4:240/254 of query aligns to 2:237/248 of P00942
Sites not aligning to the query:
4y90A Crystal structure of triosephosphate isomerase from deinococcus radiodurans (see paper)
49% identity, 95% coverage: 6:247/254 of query aligns to 2:239/244 of 4y90A
3ypiA Electrophilic catalysis in triosephosphase isomerase: the role of histidine-95 (see paper)
44% identity, 93% coverage: 4:240/254 of query aligns to 1:236/247 of 3ypiA
4ff7B Structure of c126s mutant of saccharomyces cerevisiae triosephosphate isomerase (see paper)
44% identity, 93% coverage: 4:240/254 of query aligns to 1:236/247 of 4ff7B
4ff7A Structure of c126s mutant of saccharomyces cerevisiae triosephosphate isomerase (see paper)
44% identity, 93% coverage: 4:240/254 of query aligns to 1:236/247 of 4ff7A
4y96A Crystal structure of triosephosphate isomerase from gemmata obscuriglobus (see paper)
46% identity, 97% coverage: 4:250/254 of query aligns to 1:248/250 of 4y96A
6bveA Triosephosphate isomerase of synechocystis in complex with 2- phosphoglycolic acid (see paper)
42% identity, 98% coverage: 5:252/254 of query aligns to 2:242/242 of 6bveA
A0A1L5YRA2 Triosephosphate isomerase; TIM; Allergen Scy p 8; Methylglyoxal synthase; Triose-phosphate isomerase; Allergen Scy p 8.0101; EC 5.3.1.1; EC 4.2.3.3 from Scylla paramamosain (Mud crab) (see paper)
43% identity, 98% coverage: 1:250/254 of query aligns to 1:246/248 of A0A1L5YRA2
6oogA Crystal structure of triosephosphate isomerase from taenia solium in complex with 2pg (see paper)
43% identity, 97% coverage: 4:250/254 of query aligns to 4:250/252 of 6oogA
5zfxB Crystal structure of triosephosphate isomerase from opisthorchis viverrini (see paper)
43% identity, 97% coverage: 5:251/254 of query aligns to 1:247/248 of 5zfxB
P07669 Triosephosphate isomerase; TIM; Triose-phosphate isomerase; EC 5.3.1.1 from Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast) (see paper)
41% identity, 93% coverage: 4:240/254 of query aligns to 2:237/249 of P07669
P50921 Triosephosphate isomerase; TIM; TPI; Triose-phosphate isomerase; EC 5.3.1.1 from Moritella marina (Vibrio marinus) (see paper)
43% identity, 93% coverage: 5:239/254 of query aligns to 2:239/256 of P50921
1aw1A Triosephosphate isomerase of vibrio marinus complexed with 2- phosphoglycolate (see paper)
43% identity, 93% coverage: 5:239/254 of query aligns to 1:238/255 of 1aw1A
3uwzA Crystal structure of staphylococcus aureus triosephosphate isomerase complexed with glycerol-2-phosphate (see paper)
41% identity, 96% coverage: 5:247/254 of query aligns to 3:249/254 of 3uwzA
3uwwA Crystal structure of staphylococcus aureus triosephosphate isomerase complexed with 3-phosphoglyceric acid (see paper)
41% identity, 96% coverage: 5:247/254 of query aligns to 3:249/254 of 3uwwA
>WP_012116350.1 NCBI__GCF_000017645.1:WP_012116350.1
MPASRRVLIAGNWKMNGLKSSLAEIEALAAGYDGDLKAKLDLLVCPPATLLISAAERLAG
SGVQLGGQNCHPAPAGAHTGGISAEMLKDAGVTSVIVGHSERRTNLSESDAVVMAKVKAA
WCFGLLPIVCVGETAEERDAGEAVGVVTRQVHQSLPEGCTASNLVIAYEPVWAIGTGRTP
TPEDVANIHGTIRSVLRSQFGAEADGIRILYGGSVKPDNAATLMAVADVDGALVGGASLK
AADFLAIARATPAR
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Lawrence Berkeley National Laboratory