Comparing WP_012386117.1 NCBI__GCF_000019845.1:WP_012386117.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
1o4sB Crystal structure of aspartate aminotransferase (tm1255) from thermotoga maritima at 1.90 a resolution (see paper)
34% identity, 89% coverage: 41:406/410 of query aligns to 37:382/384 of 1o4sB
P14909 Aspartate aminotransferase; AspAT; Transaminase A; EC 2.6.1.1 from Saccharolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) (Sulfolobus solfataricus) (see 3 papers)
30% identity, 89% coverage: 43:408/410 of query aligns to 37:397/402 of P14909
Sites not aligning to the query:
1gdeA Crystal structure of pyrococcus protein a-1 e-form (see paper)
30% identity, 93% coverage: 28:409/410 of query aligns to 12:385/388 of 1gdeA
1gd9A Crystall structure of pyrococcus protein-a1 (see paper)
30% identity, 93% coverage: 28:409/410 of query aligns to 12:385/388 of 1gd9A
6f35A Crystal structure of the aspartate aminotranferase from rhizobium meliloti (see paper)
32% identity, 91% coverage: 29:403/410 of query aligns to 12:393/400 of 6f35A
P58350 Aspartate aminotransferase; AAT; AspAT; Putative 2-aminoadipate transaminase; Transaminase A; EC 2.6.1.1; EC 2.6.1.39 from Rhizobium meliloti (strain 1021) (Ensifer meliloti) (Sinorhizobium meliloti) (see paper)
31% identity, 91% coverage: 29:403/410 of query aligns to 22:403/410 of P58350
5wmiA Arabidopsis thaliana prephenate aminotransferase mutant- t84v (see paper)
30% identity, 89% coverage: 43:407/410 of query aligns to 31:397/402 of 5wmiA
Sites not aligning to the query:
5wmhA Arabidopsis thaliana prephenate aminotransferase (see paper)
30% identity, 89% coverage: 43:407/410 of query aligns to 31:397/399 of 5wmhA
1j32A Aspartate aminotransferase from phormidium lapideum
30% identity, 88% coverage: 49:410/410 of query aligns to 38:386/388 of 1j32A
5wmlA Arabidopsis thaliana prephenate aminotransferase mutant- k306a (see paper)
30% identity, 89% coverage: 43:407/410 of query aligns to 32:398/404 of 5wmlA
Sites not aligning to the query:
Q02635 Aspartate/prephenate aminotransferase; AspAT / PAT; Transaminase A; EC 2.6.1.1; EC 2.6.1.79 from Rhizobium meliloti (strain 1021) (Ensifer meliloti) (Sinorhizobium meliloti) (see paper)
31% identity, 94% coverage: 19:402/410 of query aligns to 12:392/400 of Q02635
Q56232 Aspartate/prephenate aminotransferase; AspAT / PAT; Transaminase A; EC 2.6.1.1; EC 2.6.1.78 from Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8) (see 3 papers)
33% identity, 90% coverage: 40:406/410 of query aligns to 28:382/385 of Q56232
Sites not aligning to the query:
1gc4A Thermus thermophilus aspartate aminotransferase tetra mutant 2 complexed with aspartate (see paper)
32% identity, 95% coverage: 19:406/410 of query aligns to 12:382/382 of 1gc4A
1gc3A Thermus thermophilus aspartate aminotransferase tetra mutant 2 complexed with tryptophan (see paper)
32% identity, 95% coverage: 19:406/410 of query aligns to 12:382/382 of 1gc3A
1bkgA Aspartate aminotransferase from thermus thermophilus with maleate (see paper)
33% identity, 90% coverage: 40:406/410 of query aligns to 28:382/382 of 1bkgA
1bjwA Aspartate aminotransferase from thermus thermophilus (see paper)
33% identity, 90% coverage: 40:406/410 of query aligns to 28:382/382 of 1bjwA
6f77A Crystal structure of the prephenate aminotransferase from rhizobium meliloti (see paper)
31% identity, 94% coverage: 19:402/410 of query aligns to 11:391/399 of 6f77A
1b5oA Thermus thermophilus aspartate aminotransferase single mutant 1 (see paper)
33% identity, 90% coverage: 40:406/410 of query aligns to 28:382/382 of 1b5oA
2x5dD Crystal structure of a probable aminotransferase from pseudomonas aeruginosa (see paper)
29% identity, 91% coverage: 38:410/410 of query aligns to 14:379/380 of 2x5dD
1xi9C Alanine aminotransferase from pyrococcus furiosus pfu-1397077-001
27% identity, 87% coverage: 52:408/410 of query aligns to 42:392/393 of 1xi9C
>WP_012386117.1 NCBI__GCF_000019845.1:WP_012386117.1
MTIEFSSSVALPVARPEPSPEALAAPESGIVEVFAYGRGRQGLIPLFVGEGDLPTPPFIV
EAASRSLTEGETFYTYQAGVPELRAAIAAYMSRHYGAIYERTVAPFSPEQFFVTIGGMHA
LQIALRLVARADEEVIVPTPAWPNFHGALSVLGARPITVPMLFQNNGSPGWTLDFDRIEA
SITPATRCLIVNTPSNPTGWVASLKDLETLLALTRRHGLWLVADEIYGRMTFNGERAPSF
HDIMEKDDNILFLQTFSKNWAMTGLRLGWLEAPRSLAPIIENLIQYSTSGVAVPWQRAAT
VALEQGEDFFQQSLRRIHQGRTILYEGLKKTGRIIAAEPEGAFYLFCKVMGETDTRQLAL
RLIDEANVGVAPGTAFGPGGEEFLRLCFARDPALLTEAVRRLSLWLEQHG
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory