Comparing WP_012411414.1 NCBI__GCF_000020025.1:WP_012411414.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures
Found 20 (the maximum) hits to proteins with known functional sites (download)
5xu1B Structure of a non-canonical abc transporter from streptococcus pneumoniae r6 (see paper)
53% identity, 85% coverage: 21:236/254 of query aligns to 3:218/226 of 5xu1B
1f3oA Crystal structure of mj0796 atp-binding cassette (see paper)
53% identity, 86% coverage: 21:238/254 of query aligns to 1:223/232 of 1f3oA
1l2tA Dimeric structure of mj0796, a bacterial abc transporter cassette (see paper)
52% identity, 86% coverage: 21:238/254 of query aligns to 1:223/230 of 1l2tA
5ws4A Crystal structure of tripartite-type abc transporter macb from acinetobacter baumannii (see paper)
47% identity, 87% coverage: 18:239/254 of query aligns to 1:222/650 of 5ws4A
5lilA Structure of aggregatibacter actinomycetemcomitans macb bound to atpys (p21) (see paper)
46% identity, 86% coverage: 21:239/254 of query aligns to 3:221/615 of 5lilA
5lj7A Structure of aggregatibacter actinomycetemcomitans macb bound to atp (p21) (see paper)
46% identity, 86% coverage: 21:239/254 of query aligns to 3:221/592 of 5lj7A
2pclA Crystal structure of abc transporter with complex (aq_297) from aquifex aeolicus vf5
50% identity, 86% coverage: 21:239/254 of query aligns to 3:217/223 of 2pclA
P75831 Macrolide export ATP-binding/permease protein MacB; EC 7.6.2.- from Escherichia coli (strain K12) (see paper)
49% identity, 87% coverage: 21:241/254 of query aligns to 4:224/648 of P75831
P75957 Lipoprotein-releasing system ATP-binding protein LolD; EC 7.6.2.- from Escherichia coli (strain K12) (see paper)
42% identity, 86% coverage: 21:238/254 of query aligns to 5:223/233 of P75957
7mdyC Lolcde nucleotide-bound
42% identity, 86% coverage: 21:238/254 of query aligns to 2:220/226 of 7mdyC
7arlD Lolcde in complex with lipoprotein and adp (see paper)
42% identity, 86% coverage: 21:238/254 of query aligns to 2:220/222 of 7arlD
7v8iD Lolcd(e171q)e with bound amppnp in nanodiscs (see paper)
42% identity, 86% coverage: 21:238/254 of query aligns to 4:222/229 of 7v8iD
4u00A Crystal structure of ttha1159 in complex with adp (see paper)
44% identity, 87% coverage: 21:242/254 of query aligns to 2:218/241 of 4u00A
P0A9R7 Cell division ATP-binding protein FtsE from Escherichia coli (strain K12) (see paper)
39% identity, 86% coverage: 21:238/254 of query aligns to 1:215/222 of P0A9R7
8w6iD Cryo-em structure of escherichia coli str k12 ftsex complex with atp- gamma-s in peptidisc
39% identity, 86% coverage: 21:238/254 of query aligns to 1:215/219 of 8w6iD
4ymuJ Crystal structure of an amino acid abc transporter complex with arginines and atps (see paper)
40% identity, 90% coverage: 21:248/254 of query aligns to 1:223/240 of 4ymuJ
8hd0A Cell divisome spg hydrolysis machinery ftsex-envc
39% identity, 86% coverage: 21:238/254 of query aligns to 1:215/218 of 8hd0A
8g4cB Bceabs atpgs high res tm (see paper)
35% identity, 86% coverage: 21:238/254 of query aligns to 3:221/248 of 8g4cB
7tchB Bceab e169q variant atp-bound conformation (see paper)
35% identity, 86% coverage: 21:238/254 of query aligns to 2:220/245 of 7tchB
P9WQK5 Uncharacterized ABC transporter ATP-binding protein Rv0073 from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) (see paper)
41% identity, 83% coverage: 22:231/254 of query aligns to 4:213/330 of P9WQK5
>WP_012411414.1 NCBI__GCF_000020025.1:WP_012411414.1
MTNTISINDSLVPNPLPKPAIIRLENIFKIYGSGETEVRALNDVNLIVEQGEYCAIMGPS
GSGKSTAMNIIGCLDRPTTGHYYLDNLDVAQMDDRSLAHIRNKKLGFVFQQFHLLPQLTA
LENVILPMLYAGVNPKERSDRAIVALTRVGLANRLNNKPTQLSGGQQQRVAIARAIVNRP
VVLLADEPTGALDSRTTQEVLDIFSELNASGITVVMVTHEPEVARQTQRIVWFRDGQVVH
SNLTPSDLSQLAVS
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory