Comparing WP_012466715.1 NCBI__GCF_000020465.1:WP_012466715.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
1xi9C Alanine aminotransferase from pyrococcus furiosus pfu-1397077-001
38% identity, 90% coverage: 12:386/416 of query aligns to 2:374/393 of 1xi9C
P0A959 Glutamate-pyruvate aminotransferase AlaA; EC 2.6.1.2 from Escherichia coli (strain K12) (see paper)
37% identity, 84% coverage: 37:386/416 of query aligns to 32:383/405 of P0A959
4cvqA Crystal structure of an aminotransferase from escherichia coli at 2. 11 angstroem resolution (see paper)
37% identity, 84% coverage: 37:386/416 of query aligns to 32:383/404 of 4cvqA
Q93703 Tyrosine aminotransferase; TAT; L-tyrosine:2-oxoglutarate aminotransferase; EC 2.6.1.5 from Caenorhabditis elegans (see 3 papers)
30% identity, 83% coverage: 38:383/416 of query aligns to 74:419/464 of Q93703
P04694 Tyrosine aminotransferase; TAT; L-tyrosine:2-oxoglutarate aminotransferase; EC 2.6.1.5 from Rattus norvegicus (Rat) (see 2 papers)
32% identity, 85% coverage: 38:392/416 of query aligns to 71:429/454 of P04694
Sites not aligning to the query:
P17735 Tyrosine aminotransferase; TAT; L-tyrosine:2-oxoglutarate aminotransferase; EC 2.6.1.5 from Homo sapiens (Human) (see paper)
34% identity, 78% coverage: 38:363/416 of query aligns to 71:402/454 of P17735
3dydA Human tyrosine aminotransferase
34% identity, 78% coverage: 38:363/416 of query aligns to 15:346/388 of 3dydA
6f77A Crystal structure of the prephenate aminotransferase from rhizobium meliloti (see paper)
31% identity, 93% coverage: 22:406/416 of query aligns to 14:399/399 of 6f77A
Q02635 Aspartate/prephenate aminotransferase; AspAT / PAT; Transaminase A; EC 2.6.1.1; EC 2.6.1.79 from Rhizobium meliloti (strain 1021) (Ensifer meliloti) (Sinorhizobium meliloti) (see paper)
31% identity, 93% coverage: 22:406/416 of query aligns to 15:400/400 of Q02635
Sites not aligning to the query:
1gc4A Thermus thermophilus aspartate aminotransferase tetra mutant 2 complexed with aspartate (see paper)
33% identity, 89% coverage: 13:384/416 of query aligns to 5:364/382 of 1gc4A
1gc3A Thermus thermophilus aspartate aminotransferase tetra mutant 2 complexed with tryptophan (see paper)
33% identity, 89% coverage: 13:384/416 of query aligns to 5:364/382 of 1gc3A
1b5oA Thermus thermophilus aspartate aminotransferase single mutant 1 (see paper)
33% identity, 89% coverage: 13:384/416 of query aligns to 5:364/382 of 1b5oA
5wmhA Arabidopsis thaliana prephenate aminotransferase (see paper)
33% identity, 84% coverage: 23:372/416 of query aligns to 17:369/399 of 5wmhA
1bkgA Aspartate aminotransferase from thermus thermophilus with maleate (see paper)
33% identity, 89% coverage: 13:384/416 of query aligns to 5:364/382 of 1bkgA
1bjwA Aspartate aminotransferase from thermus thermophilus (see paper)
33% identity, 89% coverage: 13:384/416 of query aligns to 5:364/382 of 1bjwA
5wmiA Arabidopsis thaliana prephenate aminotransferase mutant- t84v (see paper)
32% identity, 86% coverage: 15:372/416 of query aligns to 6:369/402 of 5wmiA
Sites not aligning to the query:
Q56232 Aspartate/prephenate aminotransferase; AspAT / PAT; Transaminase A; EC 2.6.1.1; EC 2.6.1.78 from Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8) (see 3 papers)
33% identity, 89% coverage: 13:384/416 of query aligns to 5:364/385 of Q56232
5wmlA Arabidopsis thaliana prephenate aminotransferase mutant- k306a (see paper)
32% identity, 86% coverage: 15:372/416 of query aligns to 6:370/404 of 5wmlA
Sites not aligning to the query:
1j32A Aspartate aminotransferase from phormidium lapideum
29% identity, 91% coverage: 24:402/416 of query aligns to 16:384/388 of 1j32A
1o4sB Crystal structure of aspartate aminotransferase (tm1255) from thermotoga maritima at 1.90 a resolution (see paper)
27% identity, 91% coverage: 24:402/416 of query aligns to 23:382/384 of 1o4sB
>WP_012466715.1 NCBI__GCF_000020465.1:WP_012466715.1
MPVQPNTPGNHAARRVQNYHYAILNLAALAEESAAAGKPVTSLNIGDPTLYGFHPPPALT
EACITALREGCNSYTSSCGIATAREAISHEASERRIATSAEEIIITSGATEAADLLCTAI
LNPGDEVLCPSPGYPLYTALVARQEAVSVPYRLDPGNNWLPDPEEIERLITPRTKLLIVI
NPNNPTGALYPPELLASIAETARRNNLVCLADEVYRKLLYSGSHHPFASFAGNDLPVCTL
ESLSKNFMVPGWRTGWMTMTNSRLIPDIRRALRKLADARVCAPAAPQFAIPEALSLGNDY
LLPVLEKLRVRRDLTVRMINGIEGLSCSNPEGAFYVMAKLDMSLYPFASDEEFIVELLRK
KRILFVHGSGFGMQPREGYFRIVYLPDPLTLDMVYHDLYDFLLHCRHHSGSIRQQL
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory