Comparing WP_012467188.1 NCBI__GCF_000020465.1:WP_012467188.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
6pk1A Alanine-glyoxylate aminotransferase 1 (agt1) from arabidopsis thaliana in presence of serine (see paper)
32% identity, 98% coverage: 2:371/379 of query aligns to 7:383/399 of 6pk1A
Q56YA5 Serine--glyoxylate aminotransferase; Alanine--glyoxylate aminotransferase; AGT; Asparagine aminotransferase; Serine--pyruvate aminotransferase; EC 2.6.1.45; EC 2.6.1.44; EC 2.6.1.-; EC 2.6.1.51 from Arabidopsis thaliana (Mouse-ear cress) (see 2 papers)
32% identity, 98% coverage: 2:371/379 of query aligns to 9:385/401 of Q56YA5
6pk3B Alanine-glyoxylate aminotransferase 1 (agt1) from arabidopsis thaliana (see paper)
32% identity, 98% coverage: 2:371/379 of query aligns to 8:384/400 of 6pk3B
1iugA The crystal structure of aspartate aminotransferase which belongs to subgroup iv from thermus thermophilus (see paper)
34% identity, 94% coverage: 5:359/379 of query aligns to 3:347/348 of 1iugA
2z9xA Crystal structure of pyridoxamine-pyruvate aminotransferase complexed with pyridoxyl-l-alanine (see paper)
31% identity, 97% coverage: 6:371/379 of query aligns to 13:383/392 of 2z9xA
2z9wA Crystal structure of pyridoxamine-pyruvate aminotransferase complexed with pyridoxal (see paper)
31% identity, 97% coverage: 6:371/379 of query aligns to 13:383/392 of 2z9wA
2z9vA Crystal structure of pyridoxamine-pyruvate aminotransferase complexed with pyridoxamine (see paper)
31% identity, 97% coverage: 6:371/379 of query aligns to 13:383/392 of 2z9vA
Q988B8 Pyridoxamine--pyruvate transaminase; Pyridoxamine-pyruvate aminotransferase; EC 2.6.1.30 from Mesorhizobium japonicum (strain LMG 29417 / CECT 9101 / MAFF 303099) (Mesorhizobium loti (strain MAFF 303099)) (see 2 papers)
31% identity, 97% coverage: 6:371/379 of query aligns to 14:384/393 of Q988B8
Sites not aligning to the query:
2dr1A Crystal structure of the ph1308 protein from pyrococcus horikoshii ot3
30% identity, 95% coverage: 2:360/379 of query aligns to 16:376/381 of 2dr1A
3zrqA Crystal structure and substrate specificity of a thermophilic archaeal serine : pyruvate aminotransferase from sulfolobus solfataricus (see paper)
32% identity, 99% coverage: 3:377/379 of query aligns to 2:380/382 of 3zrqA
3zrrA Crystal structure and substrate specificity of a thermophilic archaeal serine : pyruvate aminotransferase from sulfolobus solfataricus (see paper)
32% identity, 98% coverage: 5:377/379 of query aligns to 1:377/379 of 3zrrA
3zrpA Crystal structure and substrate specificity of a thermophilic archaeal serine : pyruvate aminotransferase from sulfolobus solfataricus (see paper)
32% identity, 97% coverage: 9:377/379 of query aligns to 4:376/377 of 3zrpA
3islA Crystal structure of ureidoglycine-glyoxylate aminotransferase (pucg) from bacillus subtilis
30% identity, 99% coverage: 3:376/379 of query aligns to 8:385/387 of 3islA
O32148 (S)-ureidoglycine--glyoxylate transaminase; UGXT; (S)-ureidoglycine--glyoxylate aminotransferase; Purine catabolism protein PucG; EC 2.6.1.112 from Bacillus subtilis (strain 168) (see paper)
29% identity, 99% coverage: 3:376/379 of query aligns to 12:407/416 of O32148
1vjoA Crystal structure of alanine--glyoxylate aminotransferase (alr1004) from nostoc sp. At 1.70 a resolution (see paper)
29% identity, 94% coverage: 3:357/379 of query aligns to 19:377/377 of 1vjoA
2huuA Crystal structure of aedes aegypti alanine glyoxylate aminotransferase in complex with alanine (see paper)
28% identity, 89% coverage: 2:338/379 of query aligns to 19:361/385 of 2huuA
2huiA Crystal structure of aedes aegypti alanine glyoxylate aminotransferase in complex with glyoxylic acid (see paper)
28% identity, 89% coverage: 2:338/379 of query aligns to 19:361/385 of 2huiA
2hufA Crystal structure of aedes aegypti alanine glyoxylate aminotransferase (see paper)
28% identity, 89% coverage: 2:338/379 of query aligns to 19:361/385 of 2hufA
Q3LSM4 Alanine--glyoxylate aminotransferase; EC 2.6.1.44 from Aedes aegypti (Yellowfever mosquito) (Culex aegypti) (see paper)
28% identity, 89% coverage: 2:338/379 of query aligns to 19:361/393 of Q3LSM4
6rv0A Human alanine:glyoxylate aminotransferase major allele (agt-ma); with pmp in the active site (see paper)
28% identity, 88% coverage: 5:338/379 of query aligns to 20:360/384 of 6rv0A
>WP_012467188.1 NCBI__GCF_000020465.1:WP_012467188.1
MKKRLFTPGPTPVPENVMLRMAAPIIHHRNPEFMEILTRVHEDLKYLFRTTQPVVVLSCS
GTGGMEASVASLFKSGEKVITVNAGKFGERWGQLVRVFTGNCVEEKVQWGTAIQPERMAE
LLKEHPDAKGVCLTHSETSTGTAADIKALCALIREKSDALILVDGITAIGAHEFHFDDWG
ADICITGSQKGLMMPPGLALVAISERAQDIINAHTHTQQFYLSLKKALKAHSAEDTPFTP
AVSLVIGLDEALQMIKAEGIENIWKRHESLAAACRQGCSALGMKLFSNSPSFAVTPVWLP
EGVDWSAFNKALKNKNGITVAAGQDEYKGKIFRVSHLGYYDELDMLTVIGGLERALKDIN
FDFEIGAGVSAVQKAFLGN
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory